ID: hsa-mir-6804
GENE: SAPS1(2)
chr19:55742203-55742452-


(3)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(5)
AGO2.ip
(2)
AGO3.ip
(4)
B-CELL
(3)
BRAIN
(19)
BREAST
(42)
CELL-LINE
(1)
CERVIX
(7)
HEART
(7)
HELA
(1)
KIDNEY
(4)
LIVER
(3)
OTHER
(1)
RRP40.ip
(29)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
GGAAGAGGGGTGCTTGTCTTCCTGTCCAGGGCTGTGCTGTCCCTCCACGCTGAGCCAGCTGCGTCCTCGGGAGGCCCCTCCCCGTGGGGCAGGTGGCAGACACACACCCAGTGAGCCGACTTCAGTCGGGTGGGATGTGAGGGTGTCAGCAGGTGACGGTGGGGGCCACGCTGACAGCCGCACCTGCCTCTCACCCACAGTGCAACCAGAGACCCCTCTACCTCTGTCCCAGCCTCCGGGGCCCACCAGC
.........................................................................................................................................((.(((((...(((((((.(((((..(((...)))..)).))))))))))....))))).))...................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189786SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR037937(GSM510475)
293cand2. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR189782SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR189784SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR037938(GSM510476)
293Red. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR038860(GSM458543)
MM426. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
TAX577738(Rovira)
total RNA. (breast)
SRR029129(GSM416758)
SW480. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
GSM956925F181A(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR038857(GSM458540)
D20. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029126(GSM416755)
143B. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR037931(GSM510469)
293GFP. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)
GSM1105752CONTROL(GSM1105752)
small RNA sequencing data. (hela)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
TAX577589(Rovira)
total RNA. (breast)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGT..........................................................................................23144.0044.008.003.003.00-2.002.001.003.00-2.00-3.001.00--1.00-1.00----1.00--1.001.00---1.00-1.00-1.001.00------1.00---------1.00-----------------------1.001.00----1.00-------------------------1.00-----1.00------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACG............................................................................................21136.0036.005.005.00--1.00-----3.001.00-1.00-1.001.001.004.00-1.00---------------1.00---2.001.00-----1.00---------1.00----1.00--------1.00---------------------1.00-----1.00----1.00--------------1.00-------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTT.........................................................................................24121.0044.005.00----2.00------1.00-----------------------------1.00--2.00--------1.00-----1.00---------1.00----1.00--------1.00-----1.00----------------1.00-----1.00-1.001.00----------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGA..............................................................................................19119.0019.002.00---1.00---5.00-1.001.00-1.00---------1.00------1.00------1.00------2.00--------1.00----1.00-------------------1.00------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGAC.............................................................................................20119.0019.009.00-------1.00---2.00-1.00----------------1.00---------------------1.00-----------------------------1.00----------------1.00-----------------1.00--1.00-----
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGG...........................................................................................22110.0010.001.00--1.003.00---------1.00--------1.00--------1.00-------------1.00-1.00------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGT...........................................................................................22110.0036.00--10.00----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTA.........................................................................................2419.0044.00-----------------1.00--------1.00------------1.00---1.00------1.001.00-----------1.00-----1.00---------------------------------1.00-----------------------
..................................................................................................................................................................................CGCACCTGCCTCTCACCCACAGT.................................................2319.009.003.00-----------------------------------------------------1.00---------1.00------------------------1.00-----------1.00---------------1.00----1.00----
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTTT........................................................................................2519.0044.00----1.001.00---------1.00-----1.00------3.00-------------------1.00-------------------------------------1.00----------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTAT........................................................................................2518.0044.00------1.003.00---1.001.00----------------------------------------------1.00--------------------------------1.00----------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGA...........................................................................................2216.0036.001.00---1.00---------------2.00------------------------------------------------------------------1.00--------------1.00------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGAA.........................................................................................2415.0010.00--5.00----------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................GTGAGGGTGTCAGCAGGTGAC.............................................................................................2115.005.004.00--------1.00---------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGTGTCAGCAGGTGACGGTGT........................................................................................2315.002.00--3.00-2.00--------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGTGTCAGCAGGTGACGGT..........................................................................................2115.005.001.00-------------2.00------------------------------------------------------------------------------------------1.00------1.00--------------
..................................................................................................................................................................................CGCACCTGCCTCTCACCCACAG..................................................2214.004.00----------------1.00--1.00---------1.00--------------------1.00----------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTTA........................................................................................2514.0044.00-3.00----1.00------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................GTGAGGGTGTCAGCAGGTGACGG...........................................................................................2314.004.00-3.00-------1.00---------------------------------------------------------------------------------------------------------------------
........................................................................................................................................GTGAGGGTGTCAGCAGGTGACGGTT.........................................................................................2514.002.00-4.00-----------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGTGAGGGTGTCAGCAGGTGAC.............................................................................................2213.003.002.00------------------------------------------1.00-----------------------------------------------------------------------------------
..................................................................................................................................................................................CGCACCTGCCTCTCACCCACAGTA................................................2413.009.00-----------------------------------------1.00--------------------------------------1.00------------------------------------------1.00---
.......................................................................................................................................TGTGAGGGTGTCAGCAGGTGACGG...........................................................................................2413.003.00-----1.00----1.00------1.00-------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................AGAGACCCCTCTACCTCTGTCCCAGC.................2613.003.00---------------------------3.00---------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CGCACCTGCCTCTCACCCACA...................................................2113.003.002.00------------------------------------------------------------------------1.00-----------------------------------------------------
...................................................................................................................................................................................GCACCTGCCTCTCACCCACAGT.................................................2213.003.00-------------------1.00---1.00------------------------------------------------------------------------1.00------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTAAT.......................................................................................2613.0044.00---------------------1.00----1.00----------------------1.00-----------------------------------------------------------------------------
........................................................................................................................................GTGAGGGTGTCAGCAGGTGA..............................................................................................2012.002.00-------------------------1.00----------------------------------------------1.00------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGAA.............................................................................................2012.0019.00-------------------------------------------------------------------------------------------------1.00----------------------1.00------
........................................................................................................................................GTGAGGGTGTCAGCAGGTGACGA...........................................................................................2312.001.00-1.00--------------------------------1.00--------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGTGTCAGCAGGTGACGGTG.........................................................................................2212.002.00-----1.00-------------------------------------------1.00-----------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTAA........................................................................................2512.0044.00----------------2.00--------------------------------------------------------------------------------------------------------------
........................................................................................................................................GTGAGGGTGTCAGCAGGTGACGGT..........................................................................................2412.002.00---1.00------1.00--------------------------------------------------------------------------------------------------------------------
........................................................................................................................................GTGAGGGTGTCAGCAGGTGACGAT..........................................................................................2412.001.00-2.00-----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTTAT.......................................................................................2612.0044.00---1.00----------------------------------------------------1.00----------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTG...............................................................................................1812.002.00--------------------------------------2.00----------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTC.........................................................................................2412.0044.001.00--1.00---------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................GCACCTGCCTCTCACCCACAG..................................................2112.002.00---------------------------------2.00---------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGC..........................................................................................2312.0010.00---2.00---------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACA............................................................................................2111.0019.00----------------------------------------------------------------------------------------------1.00--------------------------------
..........................................................................................................................................GAGGGTGTCAGCAGGTGAAAA...........................................................................................211.000.00--------------------------------------------------------------------------1.00----------------------------------------------------
.............................................................................................................................TCGGGTGGGATGTGAGGGTG.........................................................................................................2011.001.00--------------------------------------------------------------------------------------------------1.00----------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTGT........................................................................................251.000.00----------------------1.00--------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGTGAGGGTGTCAGCAGGGGAC.............................................................................................221.000.001.00------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGTGAGGGTGTCAGCAGGTGACGGTCT........................................................................................2711.001.00---1.00---------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTTAA.......................................................................................2611.0044.00-----------------------------------------------1.00-------------------------------------------------------------------------------
...........................................................................................................................................AGGGTGTCAGCAGGTGACGGTTA........................................................................................2311.005.00-----1.00-------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CGGGTGGGATGTGAGGGTGTCAGCAGGTG...............................................................................................2911.001.00-----------------------------1.00-------------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACT............................................................................................2111.0019.00-------------1.00-----------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGCT.........................................................................................2411.0010.00---1.00---------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CAACCAGAGACCCCTCTACCTCCG........................241.000.00---1.00---------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGTGTCAGCAGGTGACGGTGG........................................................................................2311.001.00-------------------------------1.00-----------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGTGCAACCAGAGACCCCTCTA..............................2211.001.00----------------------------------------------------------------------------------------------------------------------------1.00--
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGAAT.........................................................................................2411.0036.00-----------------------------------------------------------------1.00-------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGTAT.........................................................................................2411.0036.001.00------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................GAGGGTGTCAGCAGGTGACGGTTA........................................................................................241.000.00-----------------------------------------------------------------------------------------------1.00-------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTTTT.......................................................................................2611.0044.00----------------------------------------------------------------------------------------1.00--------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGAT.............................................................................................2011.0019.00----------------------------------------------1.00--------------------------------------------------------------------------------
........................................................................................................................................GTGAGGGTGTCAGCAGGTGACGGTAT........................................................................................2611.002.00-------------------1.00-----------------------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTAGA.......................................................................................2611.0044.00---------------------------------------------------------------------------------1.00---------------------------------------------
........................................................................................................................................................................................................TGCAACCAGAGACCCCTCTACCTCCG........................261.000.00---1.00---------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGTGTCAGCAGGTGACGGTA.........................................................................................2211.005.00------------------------1.00------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGTGTCAGCAGGTGACGGTC.........................................................................................2211.005.00-------------------------------------------------------------------------------------1.00-----------------------------------------
..........................................................................................................................................GAGGGTGTCAGCAGGTGACGGTTC........................................................................................241.000.00---1.00---------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................GCCTCCGGGGCCCACGCAC191.000.00-------1.00-----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................GTGAGGGTGTCAGCAGGTGACG............................................................................................2211.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGAATT...........................................................................................2211.0019.00--------------------------------------------------------------------------------------------------------------1.00----------------
..........................................................................................................................................GAGGGTGTCAGCAGGTGACGGTAAT.......................................................................................251.000.00----------------------------------------------------1.00--------------------------------------------------------------------------
..............................GCTGTGCTGTCCCTCCACT.........................................................................................................................................................................................................191.000.00---1.00---------------------------------------------------------------------------------------------------------------------------
...................................................................CGGGAGGCCCCTCCCCGGAG...................................................................................................................................................................201.000.00-------------------------------------------------------------------1.00-----------------------------------------------------------
..................................................................................................................................................................................CGCACCTGCCTCTCACCCACAGA.................................................2311.004.00-----------------------------------1.00-------------------------------------------------------------------------------------------
........................................................................................................................................GTGAGGGTGTCAGCAGGTGACGGTTTT.......................................................................................2711.002.00--------------1.00----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGTGAGGGTGTCAGCAGGTGACGGTT.........................................................................................2611.001.00---------------------1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CGCACCTGCCTCTCACCCAC....................................................2011.001.00---------------------------------------------------1.00---------------------------------------------------------------------------
..........................................................................................................................................GAGGGTGTCAGCAGGTGACG............................................................................................2011.001.001.00------------------------------------------------------------------------------------------------------------------------------
......................................................................................GGGCAGGTGGCAGACTGC..................................................................................................................................................181.000.00-----------------------------1.00-------------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTAAA.......................................................................................2611.0044.00-------------1.00-----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CGCACCTGCCTCTCACCCACAGATC...............................................2511.004.00------1.00------------------------------------------------------------------------------------------------------------------------
...................................................................CGGGAGGCCCCTCCCTC......................................................................................................................................................................171.000.00---------------------------------------------------------------------------------------------------------------1.00---------------
........................................................................................................................................GTGAGGGTGTCAGCAGGTGACGGTA.........................................................................................2511.002.00-------------------------1.00-----------------------------------------------------------------------------------------------------
........................................................................................................................................GTGAGGGTGTCAGCAGGTGACGGC..........................................................................................2411.004.00------------------------------------1.00------------------------------------------------------------------------------------------
...............................................................................................................................................TGTCAGCAGGTGACGTG..........................................................................................171.000.00-------------------1.00-----------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................GCACCTGCCTCTCACCCACAGTTT...............................................2411.003.00--------1.00----------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTTTTT......................................................................................2711.0044.00---------1.00---------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGT..............................................................................................1911.002.00-------------------------------------------------------------1.00-----------------------------------------------------------------
.............................................................................................................................................GGTGTCAGCAGGTGACGGTT.........................................................................................201.000.00-------------------------------------------------------------------------------------------1.00-----------------------------------
........................................................................................................................................GTGAGGGTGTCAGCAGGTGACGGTC.........................................................................................2511.002.00------1.00------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTTCAT......................................................................................2711.0044.00------1.00------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AGGGTGTCAGCAGGTGACGGTAT........................................................................................2311.005.00----1.00--------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACAA...........................................................................................2211.0019.00---------------1.00---------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTTTAT......................................................................................2711.0044.00------------------------1.00------------------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGGTTATT......................................................................................2711.0044.00---------1.00---------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGTGAGGGTGTCAGCAGGTGACG............................................................................................2311.001.00------------------------------------------------------------------1.00------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGC..............................................................................................1911.002.00-------------------------------------1.00-----------------------------------------------------------------------------------------
.......................................................................................................................................TGTGAGGGTGTCAGCAGGTGACGGT..........................................................................................2511.001.001.00------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................ACCAGAGACCCCTCTACCTCTGTCC.....................2511.001.00---------------------------------------1.00---------------------------------------------------------------------------------------
............................................................................................................................................................CGGTGGGGGCCACGCGA.............................................................................171.000.00-------------1.00-----------------------------------------------------------------------------------------------------------------
.........................................................................................................................................TGAGGGTGTCAGCAGGTGACGTC..........................................................................................2311.0036.00------1.00------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................GCACCTGCCTCTCACCCACAGTT................................................2311.003.00----------------------1.00--------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................CCTCCGGGGCCCACC...1560.170.17--------------------------------------------------------0.17----------------------------------------------------------------------
................................................................................CCCGTGGGGCAGGTGG..........................................................................................................................................................1670.140.14------------------------------------------------------------------------------------------------------------------------------0.14

Antisense strand
GGAAGAGGGGTGCTTGTCTTCCTGTCCAGGGCTGTGCTGTCCCTCCACGCTGAGCCAGCTGCGTCCTCGGGAGGCCCCTCCCCGTGGGGCAGGTGGCAGACACACACCCAGTGAGCCGACTTCAGTCGGGTGGGATGTGAGGGTGTCAGCAGGTGACGGTGGGGGCCACGCTGACAGCCGCACCTGCCTCTCACCCACAGTGCAACCAGAGACCCCTCTACCTCTGTCCCAGCCTCCGGGGCCCACCAGC
.........................................................................................................................................((.(((((...(((((((.(((((..(((...)))..)).))))))))))....))))).))...................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189786SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR037937(GSM510475)
293cand2. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR189782SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR189784SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR037938(GSM510476)
293Red. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR038860(GSM458543)
MM426. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
TAX577738(Rovira)
total RNA. (breast)
SRR029129(GSM416758)
SW480. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
GSM956925F181A(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR038857(GSM458540)
D20. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029126(GSM416755)
143B. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR037931(GSM510469)
293GFP. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)
GSM1105752CONTROL(GSM1105752)
small RNA sequencing data. (hela)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
TAX577589(Rovira)
total RNA. (breast)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
...............................................................................................................................................................................................................................CTGTCCCAGCCTCCGGGGAG....... 201.000.00-------------------------------------------------------1.00-----------------------------------------------------------------------
........................................................................GGCCCCTCCCCGTGGGGGG............................................................................................................................................................... 191.000.00--------------------------------------------------------------------1.00----------------------------------------------------------
..................................................................TCGGGAGGCCCCTCCCCCC..................................................................................................................................................................... 191.000.00------------------------1.00------------------------------------------------------------------------------------------------------
.....................................TGTCCCTCCACGCTGACAGA................................................................................................................................................................................................. 201.000.00-------------------------------------------------------------------------------------------------------------1.00-----------------
.................................................................................................................................................................................................................................GTCCCAGCCTCCGGGCTG....... 181.000.00----------------------------------------------------------------------------------------------------------1.00--------------------
...........................................TCCACGCTGAGCCAGAC.............................................................................................................................................................................................. 171.000.00-------------------------------------------------------------------------------1.00-----------------------------------------------
......GGGGTGCTTGTCTTCCAGCT................................................................................................................................................................................................................................ 201.000.00-----------------------------------------------------------------------------------------------------------------------------1.00-
................................................................CCTCGGGAGGCCCCT........................................................................................................................................................................... 1560.170.17-------------------------------------------------------0.17-----------------------------------------------------------------------