ID: hsa-mir-6794
GENE: KIAA0973(9)
chr19:12963012-12963191+


(2)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(1)
AGO3.ip 		(4)
B-CELL 		(10)
BRAIN 		(5)
BREAST 		(25)
CELL-LINE 		(1)
CERVIX 		(1)
HEART 		(4)
HELA 		(3)
OTHER 		(1)
RRP40.ip 		(3)
SKIN 		(1)
XRN.ip

Sense strand
CCCCCGCTACATCATCCGCCAGCTGGGCCTCACCCGTGACCCCTTTCCAGGTGCCGGCTGGTGGGCGCAGGGGGACTGGGGGTGAGCAGGCCCAGAACCCAGCTCGTGCTCACTCTCAGTCCCTCCCTAGATGTGGTGCATCTGGAGGAACAGGACAGTGGTGGTTCCAACACCCCTGAG
..............................................................(((....((((((((((((((((((((((..........)))..))))))))))))))))))))))....................................................
..............................................................63.................................................................130................................................
SizePerfect hitTotal NormPerfect NormSRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR189785DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR189784SRR038855(GSM458538)
D10. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR040035(GSM532920)
G001T. (cervix)		TAX577745(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Paz8D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189787SRR037935(GSM510473)
293cand3. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343336GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038860(GSM458543)
MM426. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR343334TAX577746(Rovira)
total RNA. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...................................................................CAGGGGGACTGGGGGTGAGC.............................................................................................20198.0098.0022.0023.008.0018.009.008.004.00-2.001.00-----------1.00------------------1.00-----------1.00---------
...................................................................CAGGGGGACTGGGGGTGAGCA............................................................................................21125.0025.00-7.001.00-5.001.003.00---1.00---1.00-----2.001.00--------------1.00--------1.00-----1.00----------
...................................................................CAGGGGGACTGGGGGTGAGCAT...........................................................................................22118.0025.003.00-4.00-3.001.001.00--1.00--1.00------------1.00---1.00--------------1.00-------------1.00---
...................................................................CAGGGGGACTGGGGGTGAGCAA...........................................................................................22117.0025.006.004.00--3.00-3.00-----------1.00-------------------------------------------
...................................................................CAGGGGGACTGGGGGTGAG..............................................................................................19115.0015.006.003.00-3.00--1.00----------------------------1.00--------------1.00-----------
..................................................................GCAGGGGGACTGGGGGTGAGCAG...........................................................................................23112.0012.0012.00-------------------------------------------------------------
..................................................................GCAGGGGGACTGGGGGTGAGCA............................................................................................22110.0010.006.00-----1.00-----------------2.00------1.00------------------------------
...................................................................CAGGGGGACTGGGGGTGAGCAG...........................................................................................2218.008.004.00-----1.00----3.00--------------------------------------------------
...................................................................CAGGGGGACTGGGGGTGAGCAAT..........................................................................................2318.0025.00--8.00-----------------------------------------------------------
..................................................................GCAGGGGGACTGGGGGTGAGC.............................................................................................2116.006.00-3.00----2.00----------------1.00--------------------------------------
....................................................................AGGGGGACTGGGGGTGAGCAGG..........................................................................................2215.005.00---5.00----------------------------------------------------------
...................................................................CAGGGGGACTGGGGGTGAGAA............................................................................................2115.0015.001.003.00---1.00--------------------------------------------------------
..................................................................GCAGGGGGACTGGGGGTGAGCAT...........................................................................................2315.0010.00--3.00-------------------------------------------1.00--1.00------------
...................................................................CAGGGGGACTGGGGGTGAGA.............................................................................................2015.0015.00------1.00---1.00----1.00-----------1.00-------------1.00--------------------
....................................................................AGGGGGACTGGGGGTGAGCATT..........................................................................................225.000.00--5.00-----------------------------------------------------------
............................................................................................................CTCACTCTCAGTCCCTCCCTAG..................................................2214.004.00-3.00---1.00--------------------------------------------------------
...................................................................CAGGGGGACTGGGGGTGAGCAGA..........................................................................................2314.008.002.001.00-------------------------------------------------------1.00----
..................................................................GCAGGGGGACTGGGGGTGAGCAA...........................................................................................2313.0010.00------1.00----------------1.00-----------------------------------1.00--
..................................................................GCAGGGGGACTGGGGGTGA...............................................................................................1913.003.00-3.00------------------------------------------------------------
...................................................................CAGGGGGACTGGGGGTGAAAAA...........................................................................................2213.002.00-------------3.00------------------------------------------------
........................................................................................................CGTGCTCACTCTCAGTCCCTCC......................................................2213.003.00-2.00---1.00--------------------------------------------------------
...................................................................CAGGGGGACTGGGGGTGAGCAAA..........................................................................................2313.0025.00----1.00-----------------1.00---------1.00-----------------------------
............................................................................................................CTCACTCTCAGTCCCTCCCTAGT.................................................2312.004.00-1.00-----------------1.00------------------------------------------
...................................................................CAGGGGGACTGGGGGTGAGCATA..........................................................................................2312.0025.00--1.00--1.00--------------------------------------------------------
...................................................................CAGGGGGACTGGGGGTGAGT.............................................................................................2012.0015.00----------1.00-----1.00---------------------------------------------
......................................................................GGGGACTGGGGGTGAGCAGG..........................................................................................2012.002.00--------------2.00-----------------------------------------------
..................................................................GCAGGGGGACTGGGGGTGAGCATT..........................................................................................2412.0010.00----2.00---------------------------------------------------------
...................................................................CAGGGGGACTGGGGGTGAGG.............................................................................................2012.0015.001.00-1.00-----------------------------------------------------------
...................................................................CAGGGGGACTGGGGGTGAGCATAA.........................................................................................2412.0025.00----2.00---------------------------------------------------------
...................................................................CAGGGGGACTGGGGGTGA...............................................................................................1812.002.00----------------------1.00------------------------------1.00--------
............................................................................................................CTCACTCTCAGTCCCTCCCTT...................................................212.000.00----------------2.00---------------------------------------------
..........................................................................................................TGCTCACTCTCAGTCCCTCCCTAGA.................................................2511.001.00-1.00------------------------------------------------------------
.............................................................................................................................................CTGGAGGAACAGGACAGAGG...................201.000.00-------------------1.00------------------------------------------
...................................................................CAGGGGGACTGGGGGTAGAA.............................................................................................201.000.00--1.00-----------------------------------------------------------
...................................................................CAGGGGGACTGGGGGTGAGCTAT..........................................................................................2311.0098.00-----1.00--------------------------------------------------------
.......................................................................GGGACTGGGGGTGAGCAGGCAAA......................................................................................231.000.00------------------------------------------------------1.00-------
..........................................................................................................TGCTCACTCTCAGTCCCTCCCTAGT.................................................2511.001.00-------1.00------------------------------------------------------
...................................................................CAGGGGGACTGGGGGTGAGGAT...........................................................................................2211.0015.00--1.00-----------------------------------------------------------
....................................................GCCGGCTGGTGGGCGACA..............................................................................................................181.000.00-------------------------------------1.00------------------------
..........................................................................................................TGCTCACTCTCAGTCCCTCCC.....................................................2111.001.00-1.00------------------------------------------------------------
............................................................................................................CTCACTCTCAGTCCCTCCCAT...................................................211.000.00-------1.00------------------------------------------------------
...................................................................CAGGGGGACTGGGGGTAGC..............................................................................................191.000.00------1.00-------------------------------------------------------
.....................................................................GGGGGACTGGGGGTGAGCAGGC.........................................................................................2211.001.00-------------------------1.00------------------------------------
..........................................................................................................TGCTCACTCTCAGTCCCTCCCAA...................................................2311.001.00------------1.00-------------------------------------------------
............................................................................................................CTCACTCTCAGTCCCTCCA.....................................................191.000.00--------1.00-----------------------------------------------------
...............................................................................................................................................GGAGGAACAGGACAGTGG...................1811.001.00-----1.00--------------------------------------------------------
..........................................................................................................................................................ACAGTGGTGGTTCCATGG........181.000.00------------------------------------------------1.00-------------
....................................................................AGGGGGACTGGGGGTGAGCACG..........................................................................................221.000.00---------------------------------------1.00----------------------
...................................................................................................................................................GAACAGGACAGTGGTAAT...............181.000.00--------------------------------------------------------1.00-----
..........................................................................................................TGCTCACTCTCAGTCCCTCCCTAT..................................................2411.001.00---------------------------------1.00----------------------------
........................................................................................................CGTGCTCACTCTCAGTCCCTCCAA....................................................2411.003.00--------------------------------------1.00-----------------------
.......................TGGGCCTCACCCGTGC.............................................................................................................................................161.000.00-----------------1.00--------------------------------------------
...................................................................CAGGGGGACTGGGGGTGAGCATT..........................................................................................2311.0025.00------------------------------1.00-------------------------------
.............................................................................................................TCACTCTCAGTCCCTCCCTAGTT................................................231.000.00-----1.00--------------------------------------------------------
...................................................................CAGGGGGACTGGGGGTGAGCCTT..........................................................................................2311.0098.00---------------1.00----------------------------------------------
.................................................................CGCAGGGGGACTGGGGGTGAGCAA...........................................................................................241.000.00----1.00---------------------------------------------------------
.................................................................................................CCCAGCTCGTGCTCACTCTCAGT............................................................2311.001.00----------------------------1.00---------------------------------
...................................................................CAGGGGGACTGGGGGTGAGCAGTT.........................................................................................2411.008.00----------------------------------1.00---------------------------
....................................................................AGGGGGACTGGGGGTGAGCAGGT.........................................................................................2311.005.00------------------------------------------1.00-------------------
...................................................................CAGGGGGACTGGGGGTGAGCAGGT.........................................................................................2411.001.00------------1.00-------------------------------------------------
..................................................................GCAGGGGGACTGGGGGTGAG..............................................................................................2011.001.00-------------------------------------------------------1.00------
............................................................................................................CTCACTCTCAGTCCCTCCCTA...................................................2111.001.00---------1.00----------------------------------------------------
........................................................................................................CGTGCTCACTCTCAGTCCCTCCC.....................................................2311.001.00-----1.00--------------------------------------------------------
....................................................................AGGGGGACTGGGGGTGAGCAG...........................................................................................2111.001.00---------------1.00----------------------------------------------
..........................................................................................................TGCTCACTCTCAGTCCCTCCCTAG..................................................2411.001.00-----1.00--------------------------------------------------------
..........................................................................................................TGCTCACTCTCAGTCCCTCCCTA...................................................2311.001.00-------------------------------------------1.00------------------
...................................................................CAGGGGGACTGGGGGTGAGCATAT.........................................................................................2411.0025.00--1.00-----------------------------------------------------------
..................................................................GCAGGGGGACTGGGGGTGAGCAAAA.........................................................................................2511.0010.00-----1.00--------------------------------------------------------
...................................................................CAGGGGGACTGGGGGTGAGCAAG..........................................................................................2311.0025.00------1.00-------------------------------------------------------
...................................................................CAGGGGGACTGGGGGTGCGC.............................................................................................201.000.00-----1.00--------------------------------------------------------
....................................................................AGGGGGACTGGGGGTGAGTAGT..........................................................................................221.000.00--1.00-----------------------------------------------------------
...................................................................CAGGGGGACTGGGGGTGAGCAGG..........................................................................................2311.001.00--1.00-----------------------------------------------------------
..................................................................................................................CTCAGTCCCTCCCTAGT.................................................171.000.00-1.00------------------------------------------------------------
.............................................................................................................TCACTCTCAGTCCCTCCCGAT..................................................211.000.00-----------------1.00--------------------------------------------
......CTACATCATCCGCC................................................................................................................................................................1411.001.00-----------------------------------------------1.00--------------
...................................................................CAGGGGGACTGGGGGTGAGGAAT..........................................................................................2311.0015.00--1.00-----------------------------------------------------------
.............................................................................................................TCACTCTCAGTCCCTCCCTTTT.................................................221.000.00-------1.00------------------------------------------------------
..........................................................................................................TGCTCACTCTCAGTCCCTCCCAG...................................................2311.001.00------1.00-------------------------------------------------------
...................................................................CAGGGGGACTGGGGGTTAGT.............................................................................................201.000.001.00-------------------------------------------------------------
..................................................................................................................................................GGAACAGGACAGTGGTGG................1820.500.50--------0.50-----------------------------------------------------
................................................................................................................................................GAGGAACAGGACAGTGG...................1730.330.33------------------------------------------------------------0.33-
....................................................................AGGGGGACTGGGGGTG................................................................................................1680.120.12-------------------------------------------------------------0.12

Antisense strand
CCCCCGCTACATCATCCGCCAGCTGGGCCTCACCCGTGACCCCTTTCCAGGTGCCGGCTGGTGGGCGCAGGGGGACTGGGGGTGAGCAGGCCCAGAACCCAGCTCGTGCTCACTCTCAGTCCCTCCCTAGATGTGGTGCATCTGGAGGAACAGGACAGTGGTGGTTCCAACACCCCTGAG
..............................................................(((....((((((((((((((((((((((..........)))..))))))))))))))))))))))....................................................
..............................................................63.................................................................130................................................
SizePerfect hitTotal NormPerfect NormSRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR189785DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR189784SRR038855(GSM458538)
D10. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR040035(GSM532920)
G001T. (cervix)		TAX577745(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Paz8D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189787SRR037935(GSM510473)
293cand3. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343336GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038860(GSM458543)
MM426. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR343334TAX577746(Rovira)
total RNA. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.............ATCCGCCAGCTGGGCT....................................................................................................................................................... 161.000.00--------------------------1.00-----------------------------------
......................................................................GGGGACTGGGGGTGAACCC........................................................................................... 191.000.00-------1.00------------------------------------------------------
.................................................GGTGCCGGCTGGTGGG................................................................................................................... 161.000.00------------------1.00-------------------------------------------
.......................................................................................................................................................AGGACAGTGGTGGTTTTG........... 181.000.00--------------------------1.00-----------------------------------