ID: hsa-mir-6792
GENE: KIAA1543(16)
chr19:7682275-7682478+


(2)
AGO2.ip
(6)
B-CELL
(10)
BRAIN
(10)
BREAST
(13)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(3)
LIVER
(1)
OTHER
(9)
SKIN
(1)
XRN.ip

Sense strand
GGAAAATGGCAGCAATGCCTCCTCCCCAGCGTCAGTGCCCGAGTACACAGGTAAGCAGGGGCTCTGGGTGATGTGAGGAGCAACAGGCACCCTCCTCCACAGCCCCTGCTCATTCCTGCTGCCCCCCACCCCCTCCCACTGCCTCACCCTCTAGGTCCACGGCTGTACAAAGAACCCAGCGCCAAGTCCAACAAGTTCATCATC
.....................................................((((((((((.((((......((((.((.....))..)))).)))).))))))))))..............................................................................................
..................................................51.................................................................118....................................................................................
SizePerfect hitTotal NormPerfect NormGSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189784GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR189786SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR040035(GSM532920)
G001T. (cervix)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577579(Rovira)
total RNA. (breast)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR040010(GSM532895)
G529N. (cervix)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
TAX577453(Rovira)
total RNA. (breast)
SRR343334SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR189782SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................................................GTAAGCAGGGGCTCTGGGTGA.....................................................................................................................................21112.0012.001.00-3.001.00-1.00-1.00-----1.00---------1.00--------1.00-------1.00--1.00----------------
............................................................................................TCCTCCACAGCCCCTGCTCATT..........................................................................................2215.005.00-----------------1.00----1.00-------1.00---------------1.00----1.00--------
...................................................TAAGCAGGGGCTCTGGGTGATGT..................................................................................................................................2314.004.00----------1.00----------------1.00---1.00---------------------1.00------
..................................................GTAAGCAGGGGCTCTGGGTGAT....................................................................................................................................2214.004.001.00-1.001.00-1.00------------------------------------------------------
...........................................................................................CTCCTCCACAGCCCCTGCTCAT...........................................................................................2214.004.00------------2.00---------------------1.00---1.00---------------------
...................................................TAAGCAGGGGCTCTGGGTGATGTG.................................................................................................................................2414.004.00-3.00----------------------------------1.00-----------------------
...................................................TAAGCAGGGGCTCTGGGTGATGTGA................................................................................................................................2514.004.001.00-----------------1.00--1.00-----------------------------------1.00--
...................................................TAAGCAGGGGCTCTGGGTGAT....................................................................................................................................2113.003.00----------1.00-------1.00-------------------------------1.00---------
..................................................GTAAGCAGGGGCTCTGGGTGATG...................................................................................................................................2312.002.00---1.00----1.00---------------------------------------------------
.............................................................................................................................................................CACGGCTGTACAAAGAACAT...........................202.000.00----2.00-------------------------------------------------------
.............................................................................................................................CCACCCCCTCCCACTGCCCTA..........................................................212.000.00----2.00-------------------------------------------------------
....................................................AAGCAGGGGCTCTGGGTGATGT..................................................................................................................................2212.002.00-------------------2.00----------------------------------------
....................................................AAGCAGGGGCTCTGGGTGATGTG.................................................................................................................................2312.002.00-2.00----------------------------------------------------------
..................................................GTAAGCAGGGGCTCTGGGTGATGT..................................................................................................................................2412.002.00-------------1.00-----------------------1.00----------------------
..................................................GTAAGCAGGGGCTCTGGGTGACG...................................................................................................................................2312.0012.00--------------------2.00---------------------------------------
...................................................TAAGCAGGGGCTCTGGGTGACG...................................................................................................................................2211.001.00--------------------------1.00---------------------------------
.........................................................................................................................................................GGTCCACGGCTGTACAAA.................................1811.001.00---------------1.00--------------------------------------------
..................................................GTAAGCAGGGGCTCTGGGTGAAT...................................................................................................................................2311.0012.00---------------------------------------------1.00--------------
..................................................GTAAGCAGGGGCTCTGGTTGA.....................................................................................................................................2111.001.00--1.00---------------------------------------------------------
..........................................................................................................................CCCCCACCCCCTCCCACTTA..............................................................201.000.00-------------------------1.00----------------------------------
..................................................GTAAGCAGGGGCTCTGGGTA......................................................................................................................................201.000.001.00-----------------------------------------------------------
...................................................TAAGCAGGGGCTCTGGGTGA.....................................................................................................................................2011.001.00--------------------------------------------------------1.00---
..................................................GTAAGCAGGGGCTCTGGGTG......................................................................................................................................2011.001.00-------1.00----------------------------------------------------
..................................................GTAAGCAGGGGCTCTGGGTATT....................................................................................................................................221.000.00-----1.00------------------------------------------------------
...........................................................................................CTCCTCCACAGCCCCTGCTCATT..........................................................................................2311.001.00-----------------1.00------------------------------------------
................................................................................................................................................CACCCTCTAGGTCCACTC..........................................181.000.00--------------------------------------------1.00---------------
..................................................GTAAGCAGGGGCTCTGGGTGT.....................................................................................................................................2111.001.00--------1.00---------------------------------------------------
...................................................TAAGCAGGGGCTCTGGGTAA.....................................................................................................................................201.000.00-----------------------------------------1.00------------------
..................................................GTAAGCAGGGGCTCTGGGTGAAA...................................................................................................................................2311.0012.00-----------------------------------1.00------------------------
..................................................GTAAGCAGGGGCTCTGGGTGATGTGA................................................................................................................................2611.001.00------------------------------------------------1.00-----------
...................................................TAAGCAGGGGCTCTGGGTGATA...................................................................................................................................2211.003.00---------------------------------------1.00--------------------
...................................................TAAGCAGGGGCTCTGGGTGATGTAA................................................................................................................................2511.004.00-------1.00----------------------------------------------------
...........................................................................................CTCCTCCACAGCCCCTGCTC.............................................................................................2011.001.00---------------------1.00--------------------------------------
..................................................GTAAGCAGGGGCTCTGG.........................................................................................................................................1711.001.00---------1.00--------------------------------------------------
..................................................GTAAGCAGGGGCTCTGGGTTT.....................................................................................................................................211.000.00---1.00--------------------------------------------------------
..................................................GTAAGCAGGGGCTCTGGGTGATGTGT................................................................................................................................2611.001.00----------------------------1.00-------------------------------
..................................................GTAAGCAGGGGCTCTGGGTGATGTG.................................................................................................................................2511.001.00-----------1.00------------------------------------------------
.........................................................................................................................................................................AAGAACCCAGCGCCAAGTCCAA.............2211.001.00---------------1.00--------------------------------------------
...................................................TAAGCAGGGGCTCTGGGAGCA....................................................................................................................................211.000.00-----------1.00------------------------------------------------
...............................................................................................................ATTCCTGCTGCCCCCAAG...........................................................................181.000.00----------------1.00-------------------------------------------
...................................................TAAGCAGGGGCTCTGGGTGATT...................................................................................................................................2211.003.00------------------------------------------1.00-----------------
...................................................TAAGCAGGGGCTCTGGGTGATAAT.................................................................................................................................2411.003.00----------------------------------------------------1.00-------
.........................................................................................CCCTCCTCCACAGCCCCTGCTCA............................................................................................2311.001.00-------------------------------------------------------1.00----
...................................................TAAGCAGGGGCTCTGGGTG......................................................................................................................................1911.001.001.00-----------------------------------------------------------
..................................................GTAAGCAGGGGCTCTGGGTGATGA..................................................................................................................................2411.002.00------------------------1.00-----------------------------------
.............................................................................................................................CCACCCCCTCCCACTGCCAAAC.........................................................221.000.00------------------------------------------------------1.00-----
........................................................AGGGGCTCTGGGTGAT....................................................................................................................................1660.830.83-0.83----------------------------------------------------------
.........................................................................................................................................................................AAGAACCCAGCGCC.....................1490.110.11-----------------------------------------------------------0.11

Antisense strand
GGAAAATGGCAGCAATGCCTCCTCCCCAGCGTCAGTGCCCGAGTACACAGGTAAGCAGGGGCTCTGGGTGATGTGAGGAGCAACAGGCACCCTCCTCCACAGCCCCTGCTCATTCCTGCTGCCCCCCACCCCCTCCCACTGCCTCACCCTCTAGGTCCACGGCTGTACAAAGAACCCAGCGCCAAGTCCAACAAGTTCATCATC
.....................................................((((((((((.((((......((((.((.....))..)))).)))).))))))))))..............................................................................................
..................................................51.................................................................118....................................................................................
SizePerfect hitTotal NormPerfect NormGSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189784GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR189786SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR040035(GSM532920)
G001T. (cervix)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577579(Rovira)
total RNA. (breast)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR040010(GSM532895)
G529N. (cervix)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
TAX577453(Rovira)
total RNA. (breast)
SRR343334SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR189782SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
......................................CCGAGTACACAGGTAAGCAG.................................................................................................................................................. 2012.002.00--------------2.00---------------------------------------------
...................................................................................................................................CCTCCCACTGCCTCATGTG...................................................... 192.000.00------2.00-----------------------------------------------------
.........................................................................................................................CCCCCCACCCCCTCCCAAGGC.............................................................. 211.000.00----------------1.00-------------------------------------------
........................................................................................ACCCTCCTCCACAGCAAAG................................................................................................. 191.000.00---------1.00--------------------------------------------------
...................................................................................................................................CCTCCCACTGCCTCAAGTG...................................................... 191.000.00-----------------------------------------------1.00------------
......................................................................................GCACCCTCCTCCACATCTG................................................................................................... 191.000.00-------------------------------------------------1.00----------
........................................................................................................CCTGCTCATTCCTGCTGAC................................................................................. 191.000.00-----------------------------1.00------------------------------
............................................................................................................CTCATTCCTGCTGCCCAGCA............................................................................ 201.000.00---------------------------------1.00--------------------------
.....................................................................................................................GCTGCCCCCCACCCCCTCCCACTGCCTCAC......................................................... 3011.001.00------1.00-----------------------------------------------------
...................................................................................................................................CCTCCCACTGCCTCAATTC...................................................... 191.000.001.00-----------------------------------------------------------
..................................................................................................................................................CCCTCTAGGTCCACG........................................... 1520.500.50----------------------0.50-------------------------------------
............................................................................................................................................................CCACGGCTGTACAA.................................. 1420.500.50----------------------------------------------------------0.50-
................................................................................................CCACAGCCCCTGCTCATT.......................................................................................... 1830.330.33--------0.33---------------------------------------------------
................................................................................................CCACAGCCCCTGCTCAT........................................................................................... 1740.250.25--0.25---------------------------------------------------------