ID: hsa-mir-6789
GENE: PLEKHJ1(3)
chr19:2235778-2235971-


(1)
AGO1.ip 		(6)
AGO2.ip 		(8)
B-CELL 		(3)
BRAIN 		(9)
BREAST 		(44)
CELL-LINE 		(4)
CERVIX 		(2)
FIBROBLAST 		(3)
HEART 		(4)
HELA 		(4)
LIVER 		(1)
OTHER 		(36)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
TGAAGCTGGTGGTGAATTTCCTCTTCTACTTTCGGACAGACGAGGCCGAGGTAGGGGCGTCCCGGGCGCGCGGGCGGGTCCCAGGCTGGGCCCCTCGGAGGCCGGGTGCTCACTGCCCCGTCCCGGCGCCCGTGTCTCCTCCAGCCCGTCGGAGCCCTGCTGCTGGAGCGCTGCAGAGTCGTCCGGGAAGAGCC
....................................................(((((((...(((((((.((((((((...(((..(((((.((.(((...))))).)))))))).)))).))))))))))))))).)))......................................................
..................................................51...........................................................................................144................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189782DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189784SRR553576(SRX182782)
source: Testis. (testes)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR189783SRR189786DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR189787SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038857(GSM458540)
D20. (cell line)		SRR189785SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR191527(GSM715637)
128genomic small RNA (size selected RNA from . (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR040028(GSM532913)
G026N. (cervix)		DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR029130(GSM416759)
DLD2. (cell line)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040037(GSM532922)
G243T. (cervix)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040025(GSM532910)
G613T. (cervix)		SRR038860(GSM458543)
MM426. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359211(GSM359211)
hepg2_biotin_hl_2a. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		GSM956925Ago2(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038858(GSM458541)
MEL202. (cell line)		GSM359212(GSM359212)
hepg2_biotin_hl_2b. (cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR040008(GSM532893)
G727N. (cervix)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR343335SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...........................................................................................................................CGGCGCCCGTGTCTCCTCCAGT.................................................22156.0022.0019.004.001.001.001.00-1.00-1.002.00---4.00--2.00-------2.001.002.00----1.00---1.00--1.00-2.00-------1.00--------1.00-----------1.00----------1.00-1.00----------1.00-----1.00-1.00------1.00----1.00--------------
...........................................................................................................................CGGCGCCCGTGTCTCCTCCAG..................................................21122.0022.003.0010.00--2.00-1.00--1.00-------1.00---1.00-----------------------------------------------------1.00-1.00-------------------------------------1.00------------
...................................................TAGGGGCGTCCCGGGCGCGCGGGT.......................................................................................................................24117.0010.0017.00-------------------------------------------------------------------------------------------------------------------------------
...................................................TAGGGGCGTCCCGGGCGCGCGG.........................................................................................................................22114.0014.0010.00----------1.00---2.00-------------------------------------------------------------------1.00--------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGGT.......................................................................................................................25113.004.00--1.003.00----2.00---2.00-------1.00---------------1.001.00---------------1.00----------------------------------------------------------1.00---------------
..................................................GTAGGGGCGTCCCGGGCGCGCGG.........................................................................................................................23111.0011.00--4.001.00--1.001.001.00-----------1.00---------1.00-------------------------------------------------------------------1.00-----------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGT........................................................................................................................24110.0011.00--3.003.00--1.00-1.00---------------------------------1.00------------------------------1.00------------------------------------------------------
...........................................................................................................................CGGCGCCCGTGTCTCCTCCAGA.................................................22110.0022.002.001.00-----2.00--------1.00-----2.00-----1.00-----------------------------------------------1.00---------------------------------------------------
...................................................TAGGGGCGTCCCGGGCGCGCGGG........................................................................................................................23110.0010.006.00----------1.00-------------------------1.00--------------------------------1.00--------1.00------------------------------------------------
...........................................................................................................................CGGCGCCCGTGTCTCCTCCA...................................................2019.009.006.00------------------------------------------------1.00--------------------------------------1.00-----1.00---------------------------------
..................................................GTAGGGGCGTCCCGGGCGCG............................................................................................................................2016.006.00-3.00--3.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGGC.......................................................................................................................2515.005.00-1.00--------3.00-------1.00-------------------------------------------------------------------------------------------------------------
...........................................................................................................................CGGCGCCCGTGTCTCCTCCAGTA................................................2314.0022.002.00------1.00-------------------------------------------1.00----------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGGA.......................................................................................................................2514.004.00--------1.00---------------------------1.00--------------------------------------------------------------------------1.00--1.00-------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGG........................................................................................................................2414.004.00--1.00---1.00-1.00-----------------------------------------------------------------------------1.00-----------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGA........................................................................................................................2414.0011.002.00-1.00---------1.00-------------------------------------------------------------------------------------------------------------------
........................TCTACTTTCGGACAGACGAGGCCGAGC...............................................................................................................................................273.000.00-----2.00----------------------------------------1.00---------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGGCGGGTCCC................................................................................................................3213.003.00---------2.00----------------------------------------------1.00-----------------------------------------------------------------------
...........................................................................................................................CGGCGCCCGTGTCTCCTCCAT..................................................2113.009.001.00----------1.00-------------------------------------------------------------------------------1.00------------------------------------
...................................................TAGGGGCGTCCCGGGCGCGCGGGTTT.....................................................................................................................2613.0010.003.00-------------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGC...........................................................................................................................2113.003.00---1.00--------------------------1.00-----------------------------------1.00-------------------------------------------------------------
..........................................................................................................................................................................CTGCAGAGTCGTCCGGATC.....192.000.00---------------------------------------2.00----------------------------------------------------------------------------------------
...................................................................................................................CCCCGTCCCGGCGCCCGTGTCTCCTCC....................................................2712.002.00-2.00------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................CGGCGCCCGTGTCTCCTTCAG..................................................212.000.00-2.00------------------------------------------------------------------------------------------------------------------------------
...................................................TAGGGGCGTCCCGGGCGCGC...........................................................................................................................2012.002.002.00-------------------------------------------------------------------------------------------------------------------------------
.....................TCTTCTACTTTCGGACAGACGAGGC....................................................................................................................................................2512.002.00-----2.00--------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGC.............................................................................................................................1912.002.00--1.00------------------------------------------------------------------------------------------------------------------1.00----------
...........................................................................................................................CGGCGCCCGTGTCTCCTCCAGTTT...............................................2412.0022.00--------------------------------------------1.001.00----------------------------------------------------------------------------------
...........................................................................................................................CGGCGCCCGTGTCTCCTCCAGAA................................................2312.0022.002.00-------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................CGGCGCCCGTGTCTCCTCC....................................................1912.002.00------------1.00------------1.00------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................AGAGTCGTCCGGGAAGAG..1812.002.00----------------------------------2.00---------------------------------------------------------------------------------------------
..........................................................................................................................................................................CTGCAGAGTCGTCCGGGA......1812.002.00--------------1.00-----------------------------------------------------------------------------------------------------1.00-----------
.....................................................................................................................................................................GAGCGCTGCAGAGTCGTCCGG........2112.002.00----------------------------------------------------------------1.00------1.00--------------------------------------------------------
............................................................................................................................GGCGCCCGTGTCTCCTCCAGT.................................................212.000.00-1.00----------------------------------------------------------1.00-------------------------------------------------------------------
..............AATTTCCTCTTCTACTTCCG................................................................................................................................................................202.000.00----2.00---------------------------------------------------------------------------------------------------------------------------
...................................................TAGGGGCGTCCCGGGCGCGCG..........................................................................................................................2112.002.00-------------------------------------------------------------1.00------------------------------1.00-----------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGGG.......................................................................................................................2512.004.00-1.00---------------------1.00--------------------------------------------------------------------------------------------------------
..........................TACTTTCGGACAGACGAGGCCGAGC...............................................................................................................................................252.000.00-----2.00--------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................CTGCTGCTGGAGCGCTGCAGAGTCGTCCGG........3011.001.00---------------------------1.00----------------------------------------------------------------------------------------------------
......................................................................................................................................................................AGCGCTGCAGAGTCGTCCGGG.......2111.001.001.00-------------------------------------------------------------------------------------------------------------------------------
...................................................TAGGGGCGTCCCGGGCGCGCAGG........................................................................................................................2311.002.00------1.00-------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCACGG.........................................................................................................................2311.002.00------1.00-------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGCT.......................................................................................................................2511.0011.00----------1.00---------------------------------------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCAT...........................................................................................................................2111.002.00--------------------------------------1.00-----------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGC.........................................................................................................................231.000.00-------1.00------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................GCAGAGTCGTCCGGGAAAA...191.000.00----------------------------1.00---------------------------------------------------------------------------------------------------
............................CTTTCGGACAGACGAGG.....................................................................................................................................................1711.001.00------------------------------------------------------------------------------------1.00-------------------------------------------
..................................................GTAGGGGCGTCCCGGGAG..............................................................................................................................181.000.00-----------------1.00--------------------------------------------------------------------------------------------------------------
...............................................................................................................................................GCCCGTCGGAGCCCTGCTGCTGGAGCGCTGC....................3111.001.00---------------------------1.00----------------------------------------------------------------------------------------------------
...........................................................................................................................CGGCGCCCGTGTCTCCTCCAA..................................................2111.009.00---------------1.00----------------------------------------------------------------------------------------------------------------
.........................................................CGTCCCGGGCGCGCGG.........................................................................................................................1611.001.001.00-------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................TGCTGCTGGAGCGCTGCAGAGTCGT............2511.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------
................................CGGACAGACGAGGCCGAG................................................................................................................................................1811.001.00-----------------------------------------------------------------------------------------------1.00--------------------------------
...................................................................................................................CCCCGTCCCGGCGCCCGTGTCTCCTCTAG..................................................291.000.00-1.00------------------------------------------------------------------------------------------------------------------------------
..............................................................................................TCGGAGGCCGGGTGCT....................................................................................1611.001.00---------------------1.00----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................AGCGCTGCAGAGTCGTCCG.........1911.001.00--------------1.00-----------------------------------------------------------------------------------------------------------------
...................................................TAGGGGCGTCCCGGGCGCGCGA.........................................................................................................................2211.002.00-------1.00------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGGCGGGTCCCA...............................................................................................................3311.001.00---------1.00----------------------------------------------------------------------------------------------------------------------
.........................CTACTTTCGGACAGACGA.......................................................................................................................................................1811.001.00--------------1.00-----------------------------------------------------------------------------------------------------------------
...........................................................................................................................CGGCGCCCGTGTCTCCTCCAGAAG...............................................2411.0022.00--------------------------------------------------------------------------------------------------------------1.00-----------------
...........................................................................................................................CGGCGCCCGTGTCTCCTCCCGT.................................................2211.002.00------------------------------------------------------------------------------1.00-------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGGCGGGTCCCAGGCTGGGCCCCTCGGAGGCCGGGTGCTCACTGCCCCGTCCCGGCGCCCGTGTCTCCTCCCG..................................................941.000.00-------------------------------------------------------------------------------------------------------1.00------------------------
................................CGGACAGACGAGGCCGAGCC..............................................................................................................................................2011.001.00--------------1.00-----------------------------------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGGCGGGT...................................................................................................................2911.001.00----------------------------------------------------------------------------------------------------------1.00---------------------
............................CTTTCGGACAGACGAGGCCGAGGTAGGGGCGT......................................................................................................................................3211.001.00---------------------------------1.00----------------------------------------------------------------------------------------------
....................................................................................................................................................................GGAGCGCTGCAGAGTCGTC...........1911.001.00--------------------------------------------------------------------------1.00-----------------------------------------------------
..........................................................................................................................CCGGCGCCCGTGTCTCCTCCATT.................................................231.000.00-------------------------------------------------------------------------------------------------1.00------------------------------
...........................................................................................................................CGGCGCCCGTGTCTC........................................................1511.001.00-------------------------------------------1.00------------------------------------------------------------------------------------
..............................................................................................TCGGAGGCCGGGTGCTCACTG...............................................................................2111.001.00---------------------1.00----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................AGCGCTGCAGAGTCGATT..........181.000.00--------------------------------1.00-----------------------------------------------------------------------------------------------
........................TCTACTTTCGGACAGACGAGGCC...................................................................................................................................................2311.001.00-------------------1.00------------------------------------------------------------------------------------------------------------
..................TCCTCTTCTACTTTCGGACAGACG........................................................................................................................................................2411.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGG.................................................................................................................................1521.001.00----------------------0.50-----------------------------------------------------------------------------------------------0.50---------
............................................................................................................................................................CTGCTGCTGGAGCGCTGCAGAGTCGT............2611.001.00-------------------1.00------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGTGTCTCCTCCAGCGTGG.............................................191.000.00------------------------------------------------------------------------------------------1.00-------------------------------------
.............................................................CCGGGCGCGCGGGCGCGG...................................................................................................................181.000.00-----------------------1.00--------------------------------------------------------------------------------------------------------
...................................................TAGGGGCGTCCCGGGCGCG............................................................................................................................1911.001.00-----------------1.00--------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................GCAGAGTCGTCCGGGAAG....1811.001.00-----------------------------------------------------------------------------------------------------------1.00--------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGGTTT.....................................................................................................................2711.004.00----------------------------------------------------------------------------------------------------1.00---------------------------
...........................................................................................................................CGGCGCCCGTGTCTCCTCCAGTAAT..............................................2511.0022.00-------------------------------1.00------------------------------------------------------------------------------------------------
...............................................................................................................ACTGCCCCGTCCCGGCGCCCGTGTCTCCTTT....................................................311.000.00----------1.00---------------------------------------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGT.........................................................................................................................231.000.00-1.00------------------------------------------------------------------------------------------------------------------------------
................................CGGACAGACGAGGCCGCG................................................................................................................................................181.000.00---------------------------------------------------------------------------------------------------------1.00----------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGGTAT.....................................................................................................................2711.004.00-1.00------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................CGGCGCCCGTGTCTCCTCCAGTAA...............................................2411.0022.00-1.00------------------------------------------------------------------------------------------------------------------------------
...................................................TAGGGGCGTCCCGGGCGCGCGGTT.......................................................................................................................2411.0014.001.00-------------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCA............................................................................................................................2011.002.00------------------------------------------------------1.00-------------------------------------------------------------------------
...........................................................................................................................CGGCGCCCGTGTCTCCTCCAGTTC...............................................2411.0022.00------------------------------------------------------------------------------------------------------1.00-------------------------
...........................................................................................................................CGGCGCCCGTGTCTCC.......................................................1611.001.00------1.00-------------------------------------------------------------------------------------------------------------------------
...................................................TAGGGGCGTCCCGGGCGCGCGGGC.......................................................................................................................2411.001.001.00-------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................AGCGCTGCAGAGTCGTCCGGGAAGAGC.2711.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................CGGCGCCCGTGTCTCCTCCATT.................................................2211.009.00--------------------------------1.00-----------------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGA.........................................................................................................................231.000.00-------1.00------------------------------------------------------------------------------------------------------------------------
...................................................TAGGGGCGTCCCGGGCGCGCGGGTAT.....................................................................................................................2611.0010.00--------------------------------------------------------------------------------------------------------1.00-----------------------
....................CTCTTCTACTTTCGGACAGACGAG......................................................................................................................................................2411.001.00-------------------1.00------------------------------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGGCTT.....................................................................................................................2711.005.00----------1.00---------------------------------------------------------------------------------------------------------------------
.....................TCTTCTACTTTCGGACAGACG........................................................................................................................................................2111.001.00---------------------------------1.00----------------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGTTTA.....................................................................................................................2711.0011.00---------------------------------------------------------------------------------------1.00----------------------------------------
...................CCTCTTCTACTTTCGGACA............................................................................................................................................................1911.001.00-------------------------------------------------------------------1.00------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGGGGGG....................................................................................................................2811.004.00------------------1.00-------------------------------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGAT.......................................................................................................................2511.0011.00-------------------------------------------------------------------------------------1.00------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGGCGGGTCCCAGGCTGGGCCCCTCGGAGGCCGGGTGCTCACTGCCCCGTCCCGGCGCCCGTGTCTCCTCCAG..................................................9411.001.00-----------------------------------------------------------------------------------------1.00--------------------------------------
..................................................GTAGGGGCGTCCCGGGCGT.............................................................................................................................191.000.00---1.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................CGGCGCCCGTGTCTCCCAGT...................................................2011.001.00----1.00---------------------------------------------------------------------------------------------------------------------------
.............................................................................................CTCGGAGGCCGGGTGCTCAC.................................................................................2011.001.00--------------------------------------------------1.00-----------------------------------------------------------------------------
...........................................................................................................................CGGCGCCCGTGTCTCCCCAG...................................................2011.001.00----1.00---------------------------------------------------------------------------------------------------------------------------
...................................................................................................................CCCCGTCCCGGCGCCCGTGTCTC........................................................2311.001.00-1.00------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................GCTGGAGCGCTGCAGAGTCTCC...........221.000.00----------------------------------------------------1.00---------------------------------------------------------------------------
..............................TTCGGACAGACGAGGCCGAGG...............................................................................................................................................2111.001.00-------------------------------------------------------------------------------------------------------------1.00------------------
...........................................................................................................................CGGCGCCCGTGTCTCCTCCAGG.................................................2211.0022.001.00-------------------------------------------------------------------------------------------------------------------------------
...................................................TAGGGGCGTCCCGGGCAAT............................................................................................................................191.000.00--------------------1.00-----------------------------------------------------------------------------------------------------------
...................................................TAGGGGCGTCCCGGGCGCGCAAA........................................................................................................................2311.002.00---------------------------------------------------------------1.00----------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCA..........................................................................................................................2211.003.00-----------------------------------------------------------1.00--------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCTT.........................................................................................................................2311.003.00-----------1.00--------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................GCTGGAGCGCTGCAGAGAC..............191.000.00-----------------------------------------1.00--------------------------------------------------------------------------------------
...................................................TAGGGGCGTCCCGGGCGCGCGC.........................................................................................................................2211.002.00-----------------------------------1.00--------------------------------------------------------------------------------------------
....................CTCTTCTACTTTCGGACAGACGAGGCC...................................................................................................................................................2711.001.00------------------------------------------------------------------------1.00-------------------------------------------------------
.....................TCTTCTACTTTCGGACAGACGAGGCCGAG................................................................................................................................................2911.001.00---1.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................CGGCGCCCGTGTCTCCTCCAGAT................................................2311.0022.00-----------------------------------------------------------------1.00--------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGC...............................................................................................................................1711.001.00---------------------------------------------------------------------------------1.00----------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGTA.......................................................................................................................2511.0011.00-------1.00------------------------------------------------------------------------------------------------------------------------
..................................................GTAGGGGCGTCCCGGGCGCGCGGGTA......................................................................................................................2611.004.00-----------------------------------------------1.00--------------------------------------------------------------------------------
...................................................................................................................CCCCGTCCCGGCGCC................................................................1570.430.43---------------------------------------------0.140.14-----------------------------------------------------------------------------0.14---
..AAGCTGGTGGTGAATTT...............................................................................................................................................................................1730.330.33-----------------------------------------0.33--------------------------------------------------------------------------------------
.................................................................GCGCGCGGGCGGGTCC.................................................................................................................1640.250.25--------0.25-----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GTCGGAGCCCTGCT.................................1460.170.17-------------------------------------------------------------------------------------------------------------------------0.17------
...................................................................................................................................................................TGGAGCGCTGCAGA.................1470.140.14------0.14-------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................TCGGAGCCCTGCTG................................14100.100.10-------------------------------------------------------------------------------------------------------------------------------0.10

Antisense strand
TGAAGCTGGTGGTGAATTTCCTCTTCTACTTTCGGACAGACGAGGCCGAGGTAGGGGCGTCCCGGGCGCGCGGGCGGGTCCCAGGCTGGGCCCCTCGGAGGCCGGGTGCTCACTGCCCCGTCCCGGCGCCCGTGTCTCCTCCAGCCCGTCGGAGCCCTGCTGCTGGAGCGCTGCAGAGTCGTCCGGGAAGAGCC
....................................................(((((((...(((((((.((((((((...(((..(((((.((.(((...))))).)))))))).)))).))))))))))))))).)))......................................................
..................................................51...........................................................................................144................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189782DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189784SRR553576(SRX182782)
source: Testis. (testes)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR189783SRR189786DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR189787SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038857(GSM458540)
D20. (cell line)		SRR189785SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR191527(GSM715637)
128genomic small RNA (size selected RNA from . (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR040028(GSM532913)
G026N. (cervix)		DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR029130(GSM416759)
DLD2. (cell line)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040037(GSM532922)
G243T. (cervix)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040025(GSM532910)
G613T. (cervix)		SRR038860(GSM458543)
MM426. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359211(GSM359211)
hepg2_biotin_hl_2a. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		GSM956925Ago2(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038858(GSM458541)
MEL202. (cell line)		GSM359212(GSM359212)
hepg2_biotin_hl_2b. (cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR040008(GSM532893)
G727N. (cervix)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR343335SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.....................................................................................................................................GTCTCCTCCAGCCCGGG............................................ 171.000.00----------------------------------------------------------1.00---------------------------------------------------------------------
...................CCTCTTCTACTTTCGC............................................................................................................................................................... 161.000.00--------------------------------------------------------------------1.00-----------------------------------------------------------
..........................................AGGCCGAGGTAGGGGCGT...................................................................................................................................... 181.000.00------------------1.00-------------------------------------------------------------------------------------------------------------
......................................................................................................................................................GGAGCCCTGCTGCTGAACG......................... 191.000.00-------------------------------------------------------1.00------------------------------------------------------------------------
............................................................CCCGGGCGCGCGGGCCGAG................................................................................................................... 191.000.00-----------------------------1.00--------------------------------------------------------------------------------------------------
...............................................................GGGCGCGCGGGCGGGTC.................................................................................................................. 171.000.00-----------------------------1.00--------------------------------------------------------------------------------------------------
.................................................................................CAGGCTGGGCCCCTCGGAG.............................................................................................. 1911.001.00--------------------------------------------------------------1.00-----------------------------------------------------------------
....................................................................................................................................................TCGGAGCCCTGCTGCGGT............................ 181.000.00------------------------------------------------------------------------------------------------1.00-------------------------------
...........................................................TCCCGGGCGCGCGGG........................................................................................................................ 1560.830.83------0.33----------------------------------------------------------------------------------------------------------------0.33--0.17-----
................................................AGGTAGGGGCGTCCCG.................................................................................................................................. 1620.500.50----0.50---------------------------------------------------------------------------------------------------------------------------
...........................................................TCCCGGGCGCGCGGGGGGC.................................................................................................................... 190.330.00------------------------------------------0.17--------------------------------------------------------------------------------0.17----
...........................................................TCCCGGGCGCGCGGGGGG..................................................................................................................... 180.330.00-------------------------------------------0.170.17-----------------------------------------------------------------------------------
..................................................................................................................................................................................TCGTCCGGGAAGA... 1340.250.25------------------------------------------------------------------------------------------------------------------------0.25-------
....................................CAGACGAGGCCGA................................................................................................................................................. 1380.250.25-----------------------------------------------------------------------------------------------------------------------------0.120.12-