ID: hsa-mir-6784
GENE: PLCD3(4)
chr17:43191685-43191934-


(2)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(1)
AGO3.ip 		(1)
B-CELL 		(4)
BRAIN 		(10)
BREAST 		(15)
CELL-LINE 		(1)
CERVIX 		(2)
FIBROBLAST 		(8)
HEART 		(4)
HELA 		(1)
LIVER 		(1)
OTHER 		(12)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GGGCCAGGCTGTGTGGCTGGAGGGGGTCCCTGCAGCCTCCTCAGTGAGCTCCCCTCTCACTCTAGGTCAGAAGAGAGTGAGGAGCGGGGGCAGGGTGACCTGGGGACGGGCTTGGGCTCTGTTCCCTGGAGGTTACAGGCCGGGGCTTTGGGTGAGGGACCCCCGGAGTCTGTCACGGTCTCACCCCAACTCTGCCCCAGGGAACAGCTTTGTCAGGCACAATGCCCGCCAGCTGACCCGCGTGTACCCG
.............................................................................................................................................(((((...((((((((.....(((((.....)).))))))))))).......)))))....................................................
.....................................................................................................................................134...............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR037937(GSM510475)
293cand2. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR189785SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR189784TAX577589(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191513(GSM715623)
164genomic small RNA (size selected RNA from . (breast)		SRR040035(GSM532920)
G001T. (cervix)		SRR038863(GSM458546)
MM603. (cell line)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR189787SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
..................................................................................................................................................................................TCTCACCCCAACTCTGCCCCAGT.................................................23135.006.003.006.004.003.001.00-2.00-2.00------1.002.00-1.00---1.00--1.00----1.001.001.001.00-------------1.00-----1.00----1.00---1.00-
.................................................................................................................................................................................GTCTCACCCCAACTCTGCCCCAG..................................................23114.0014.004.00---1.00--3.00-----1.001.00---1.00-----------------1.00---------1.00------------1.00----
.................................................................................................................................................................................GTCTCACCCCAACTCTGCCCCAGT.................................................24110.0014.00----2.004.00--------------------1.00--1.00-----------1.001.00---------------------
..................................................................................................................................................................................TCTCACCCCAACTCTGCCCCAGA.................................................2318.006.001.002.00-1.00------1.00--1.00-1.00--------------------------------1.00---------------
..........................................................................................................................................GCCGGGGCTTTGGGTGAGGG............................................................................................2016.006.006.00---------------------------------------------------------------
..................................................................................................................................................................................TCTCACCCCAACTCTGCCCCAG..................................................2216.006.001.00--1.00----1.00------------------1.00----------------------1.00----1.00--------
...........................................................................................................................................CCGGGGCTTTGGGTGAGG.............................................................................................1815.005.004.00-------------------------------------------1.00-------------------
............................................................................................................................................CGGGGCTTTGGGTGAGGGAC..........................................................................................2014.004.004.00---------------------------------------------------------------
..................................................................................................................................................................................TCTCACCCCAACTCTGCCCCAAT.................................................2314.001.00--3.00-------------------------------------------------1.00-----------
..................................................................................................................................................................................TCTCACCCCAACTCTGCCCCAGC.................................................2313.006.002.00-------------1.00-------------------------------------------------
...........................................................................................................................................CCGGGGCTTTGGGTGAGGGAC..........................................................................................2113.003.00------2.00--------------------------------------1.00------------------
...........................................................................................................................................CCGGGGCTTTGGGTGAGGGACC.........................................................................................2213.003.001.00------------------1.00----1.00---------------------------------------
..................................................................................................................................................................................TCTCACCCCAACTCTGCCCCAGAT................................................2412.006.00-1.00-------1.00------------------------------------------------------
..................................................................................................................................................................................TCTCACCCCAACTCTGCCCCAGTT................................................2412.006.00---1.00-----------------------------------------------1.00------------
............................................................................................................................................CGGGGCTTTGGGTGAGGG............................................................................................1812.002.002.00---------------------------------------------------------------
.................................................................................................................................................................................GTCTCACCCCAACTCTGCCCCAT..................................................231.000.001.00---------------------------------------------------------------
...................................................................................................................................................................CGGAGTCTGTCACGG........................................................................1511.001.00----1.00-----------------------------------------------------------
.....................................................................................................GGGGACGGGCTTGGGAGAG..................................................................................................................................191.000.00---------------------------------------1.00------------------------
...........................................................................................................................................CCGGGGCTTTGGGTGAGGGACCCA.......................................................................................241.000.00------------1.00---------------------------------------------------
............................................................................................................................................CGGGGCTTTGGGTGAGTGAC..........................................................................................201.000.001.00---------------------------------------------------------------
...........................................................................................................................................CCGGGGCTTTGGGTGAGGG............................................................................................1911.001.00--------------------1.00-------------------------------------------
................................................................................................................................GAGGTTACAGGCCGGGATC.......................................................................................................191.000.00-----------1.00----------------------------------------------------
..................................................................................................................................................................................TCTCACCCCAACTCTGCCCCC...................................................211.000.00-----------------1.00----------------------------------------------
..................................................................................................................................................................................TCTCACCCCAACTCTGCCCCAA..................................................2211.001.00-------------------------------------------------1.00--------------
..................................................................................................................................................................................TCTCACCCCAACTCTGCCCCA...................................................2111.001.00-----------------------------------1.00----------------------------
..................................................................................................................................................................................TCTCACCCCAACTCTGCCCCATT.................................................2311.001.00--------------------------------------1.00-------------------------
...........................................................................................AGGGTGACCTGGGGAAGGC............................................................................................................................................191.000.00----------------------------------1.00-----------------------------
.....................................................................................................................................................................................................CAGGGAACAGCTTTGTCAG..................................1911.001.00----------------------------1.00-----------------------------------
...........................................................................................................................................CCGGGGCTTTGGGTGAGGGACA.........................................................................................2211.003.00---------1.00------------------------------------------------------
..................................................................................................................................................................................TCTCACCCCAACTCTGCCCCAAAA................................................2411.001.00--1.00-------------------------------------------------------------
...................................................................................................................................................................................CTCACCCCAACTCTGCCCCAGT.................................................221.000.00---1.00------------------------------------------------------------
..GCCAGGCTGTGTGGCTGGAGG...................................................................................................................................................................................................................................2111.001.00-------------------------------------------------------------1.00--
..................................................................................................................................................................................TCTCACCCCAACTCTGCCCCAATA................................................2411.001.00-----------------1.00----------------------------------------------
...........TGTGGCTGGAGGGGGCTTG............................................................................................................................................................................................................................191.000.00----------1.00-----------------------------------------------------
............................................................................................................................................CGGGGCTTTGGGTGAGGGACCC........................................................................................2211.001.00-------------------------------------------1.00--------------------
...............................................................................................................................GGAGGTTACAGGCCGGGTGGC......................................................................................................211.000.00-----------1.00----------------------------------------------------
..................................................................................................................................................................................TCTCACCCCAACTCTGCCCCAAA.................................................2311.001.00----------------------------------------1.00-----------------------
..................................................................................................................................................................................TCTCACCCCAACTCTGCCCCACC.................................................2311.001.00-------------------1.00--------------------------------------------
..............................................................................................................CTTGGGCTCTGTTCCCTGGAGGTTACAGGCCGGG..........................................................................................................3411.001.00-----------------------1.00----------------------------------------
............................................................................................................................................CGGGGCTTTGGGTGAGG.............................................................................................1711.001.00------------------------------------------------------1.00---------
.............................................................................................................................................GGGGCTTTGGGTGAGG.............................................................................................1650.200.20---------------------------------------------------------------0.20

Antisense strand
GGGCCAGGCTGTGTGGCTGGAGGGGGTCCCTGCAGCCTCCTCAGTGAGCTCCCCTCTCACTCTAGGTCAGAAGAGAGTGAGGAGCGGGGGCAGGGTGACCTGGGGACGGGCTTGGGCTCTGTTCCCTGGAGGTTACAGGCCGGGGCTTTGGGTGAGGGACCCCCGGAGTCTGTCACGGTCTCACCCCAACTCTGCCCCAGGGAACAGCTTTGTCAGGCACAATGCCCGCCAGCTGACCCGCGTGTACCCG
.............................................................................................................................................(((((...((((((((.....(((((.....)).))))))))))).......)))))....................................................
.....................................................................................................................................134...............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR037937(GSM510475)
293cand2. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR189785SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR189784TAX577589(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191513(GSM715623)
164genomic small RNA (size selected RNA from . (breast)		SRR040035(GSM532920)
G001T. (cervix)		SRR038863(GSM458546)
MM603. (cell line)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR189787SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
..............................................................................................................CTTGGGCTCTGTTCCAGAC......................................................................................................................... 191.000.00---------------------------------------------------------1.00------
.........................GTCCCTGCAGCCTCCGACT.............................................................................................................................................................................................................. 191.000.00---------------------1.00------------------------------------------
.....AGGCTGTGTGGCTGGAGCAGT................................................................................................................................................................................................................................ 211.000.00--------------------------------------------------------1.00-------
......................................................................................................................................ACAGGCCGGGGCTTTG.................................................................................................... 1611.001.00------------------------------------------------------------1.00---
...............................................................................AGGAGCGGGGGCAGGGTC......................................................................................................................................................... 181.000.00-------------------------------------1.00--------------------------
.....AGGCTGTGTGGCTGGAGCAGC................................................................................................................................................................................................................................ 211.000.00------------1.00---------------------------------------------------