ID: hsa-mir-6778
GENE: SHMT1(6)
chr17:18244078-18244327-


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(1)
AGO3.ip 		(6)
B-CELL 		(2)
BRAIN 		(3)
BREAST 		(32)
CELL-LINE 		(1)
HEART 		(3)
HELA 		(1)
KIDNEY 		(15)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(12)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TCCTCAGGGACTCCTGGGTCTGTGAGCCATACTTGGTTGAGCAGGCTGAACACACCAGTATCCATCCTGTCTCACCCTCAAGTCCTCATCTAGGACATCATTCCTCTTGTCATGGTGGGTGGAGCCAGTTCAAGTGGGAGGACAGGAGGCAGGTGTGGTTGGAGGAAGCAGCCTGAACCTGCCTCCCTGACATTCCACAGGTGAACCCAGATACTGGCTACATCAACTATGACCAGCTGGAGGAGAACGC
.....................................................................................................................................((((((...((((((((((((..(((((.......)))))...)))))))))).))...))))))....................................................
...............................................................................................................................128.....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189782SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR189786SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR189784SRR189783GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189785TAX577589(Rovira)
total RNA. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR029124(GSM416753)
HeLa. (hela)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR038854(GSM458537)
MM653. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
....................................................................................................................................AGTGGGAGGACAGGAGGCAGGT................................................................................................22121.0021.0010.00-----1.00---1.00--1.00--------------2.00----1.00--------1.00------------1.00-----1.00---------------1.00-1.00-----
...................................................................................................................................AAGTGGGAGGACAGGAGGCAG..................................................................................................21112.0012.007.00-------1.00-----------1.00----------1.00-1.00----------1.00----------------------------------------
....................................................................................................................................................................................................................................ATGACCAGCTGGAGGAGAACGC22112.0012.00-2.00-1.001.002.00-1.00--2.00---------1.00------2.00---------------------------------------------------------
...................................................................................................................................AAGTGGGAGGACAGGAGGCAGG.................................................................................................22111.0011.002.00-----3.00-----------------1.00-------2.00---1.00------1.00----------------------------1.00------------
....................................................................................................................................................................................................................................ATGACCAGCTGGAGGAGAACG.21110.0010.00-1.00-1.00---2.002.00----------1.00-3.00---------------------------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAG..................................................................................................2018.008.00------------2.00---1.00-----1.00------------1.00----------------1.00----------1.00----------1.00----------
...................................................................................................................................................................................TGCCTCCCTGACATTCCACAGA.................................................2218.006.00-----------------4.00------------------------------1.00--------------------1.00-----1.00-----1.00---
....................................................................................................................................AGTGGGAGGACAGGAGGCA...................................................................................................1917.007.003.00-----------1.001.00----2.00------------------------------------------------------------------
......................................................................................................................................................................................................................................GACCAGCTGGAGGAGAACG.1917.007.00-1.00-3.00------1.00--------2.00-----------------------------------------------------------------
...................................................................................................................................AAGTGGGAGGACAGGAGGCAGATC...............................................................................................2417.0012.00---------7.00---------------------------------------------------------------------------
...................................................................................................................................................................................TGCCTCCCTGACATTCCACAG..................................................2116.006.00--4.00-----------------------1.00--------------------------------1.00-------------------------
...................................................................................................................................................................................TGCCTCCCTGACATTCCACAGT.................................................2215.006.001.00----------------------3.00-----------------------------1.00-------------------------------
...................................................................................................................................................................................TGCCTCCCTGACATTCCACA...................................................2015.005.00--5.00----------------------------------------------------------------------------------
......................................................................................................................................................................................CTCCCTGACATTCCACAGT.................................................194.000.00------4.00------------------------------------------------------------------------------
...................................................................................................................................AAGTGGGAGGACAGGAGGCAGGTAT..............................................................................................2514.003.00---1.00-----------1.001.00------------------------------1.00-------------------------------------
...........................................................................................................................................................................................................................ACATCAACTATGACCAGCTGGAGA.......244.000.00-----------4.00-------------------------------------------------------------------------
................................................................................................................................................................................................................................AACTATGACCAGCTGGAGGA......2023.503.50-0.50--1.001.00--0.50-----------0.50----------------------------------------------------------------
...................................................................................................................................AAGTGGGAGGACAGGAGGCAGTAA...............................................................................................2413.0012.003.00------------------------------------------------------------------------------------
...................................................................................................................................AAGTGGGAGGACAGGAGGCAGGT................................................................................................2313.003.00------------------------------1.00----1.00--------------------------------1.00----------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGG.................................................................................................2113.003.00-------------1.00------1.00----------1.00-----------------------------------------------------
.....................................................................................................................................GTGGGAGGACAGGAGGCAGGTAT..............................................................................................233.000.00-----------------------------2.00------------------------------------1.00------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGA.................................................................................................2113.008.00------2.00---------------1.00--------------------------------------------------------------
........................................................................................................................................................GTGTGGTTGGAGGAAGCAGCCTGAACCTGCCTCCCTGACATTCCACAGA.................................................493.000.003.00------------------------------------------------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGGTT...............................................................................................2313.0021.00-----1.00------------------1.00----------------------------------------1.00-------------------
...................................................................................................................................AAGTGGGAGGACAGGAGGCAGGTT...............................................................................................2412.003.001.00------------------1.00-----------------------------------------------------------------
..................................................................................................................................................................................CTGCCTCCCTGACATTCCACA...................................................2112.002.00--2.00----------------------------------------------------------------------------------
...................................................................................................................................................................................TGCCTCCCTGACATTCACAG...................................................202.000.00--------------------------2.00----------------------------------------------------------
................................................................................................................................................................................................................................AACTATGACCAGCTGGAGGAG.....2122.002.00-1.00---0.50-0.50-----------------------------------------------------------------------------
.................................................................................................................................................................................................................................ACTATGACCAGCTGGAGGAG.....2022.002.00----2.00--------------------------------------------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAA..................................................................................................2012.007.00----------------------------------2.00--------------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGGTAA..............................................................................................2412.0021.00------------1.00--------------------------1.00---------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGGTAAA.............................................................................................2512.0021.001.00-----------------------------------------------------------1.00------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGGTAAT.............................................................................................2512.0021.00--------1.00------------------1.00---------------------------------------------------------
...................................................................................................................................AAGTGGGAGGACAGGAGGCAT..................................................................................................2112.001.00------------1.00---------------------------1.00--------------------------------------------
..................................................................................................................................CAAGTGGGAGGACAGGAGGCAGGT................................................................................................2412.002.00--------------2.00----------------------------------------------------------------------
..................................................................................................................................................................................CTGCCTCCCTGACATTCCACAG..................................................2212.002.00--1.00----------------------1.00-----------------------------------------------------------
......................................................................................................................................................................................................................................GACCAGCTGGAGGAGAACGC2012.002.00-----1.00-1.00-----------------------------------------------------------------------------
...................................................................................................................................AAGTGGGAGGACAGGAGGCAGT.................................................................................................2212.0012.00----------------1.00--------------------------------1.00-----------------------------------
.................................................................................................................................................................................................................................ACTATGACCAGCTGGAGGAGAACG.2412.002.001.00-------1.00----------------------------------------------------------------------------
................................................................................................................................................................................................................................AACTATGACCAGCTGGAGGAGAAC..2421.501.50-1.50-----------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TATGACCAGCTGGAGGAG.....1821.501.50-1.00--0.50--------------------------------------------------------------------------------
..................................................................................................................................................................................................................................CTATGACCAGCTGGAGGAGAA...2121.501.50---0.501.00--------------------------------------------------------------------------------
..................................................................................................................................................................................................................................CTATGACCAGCTGGAGGAG.....1921.501.50---1.000.50--------------------------------------------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGGGGCG.............................................................................................2511.003.00----------------------------------------------1.00--------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGGTTA..............................................................................................2411.0021.00------------------------1.00------------------------------------------------------------
...................................................................................................................................AAGTGGGAGGACAGGAGGCAGGAA...............................................................................................2411.0011.00-------1.00-----------------------------------------------------------------------------
...............................CTTGGTTGAGCAGGCTGAACACACCA.................................................................................................................................................................................................2611.001.00----1.00--------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGTGAACCCAGATACTGGCT...............................2111.001.00----------------------------------------------------------1.00--------------------------
.....................................................................................................................................................................................................................................TGACCAGCTGGAGGAGAACGC2111.001.00----1.00--------------------------------------------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGTTA...............................................................................................2311.008.00-------1.00-----------------------------------------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGGTA...............................................................................................2311.0021.00-------------------------------------------------------------------------1.00-----------
...................................................................................................................................AAGTGGGAGGACAGGAGGC....................................................................................................1911.001.00------------------1.00------------------------------------------------------------------
...................................................................................................................................................................................TGCCTCCCTGACATTCCACAGTT................................................2311.006.00-------------------------------------------------------------------1.00-----------------
..............................................................................................................................................................................................................CCAGATACTGGCTACATC..........................1811.001.00---------------------------------------------------1.00---------------------------------
...................................................................................................................................AAGTGGGAGGACAGGAGGCAGGTCAA.............................................................................................2611.003.00--------------1.00----------------------------------------------------------------------
.................................................................................................................................................................................................................................ACTATGACCAGCTGGAGGAGAAC..2321.001.00----0.50-----0.50--------------------------------------------------------------------------
...................................................................................................................................AAGTGGGAGGACAGGAGGCATA.................................................................................................2211.001.00----------------1.00--------------------------------------------------------------------
..................................................................................................................................................................................................................ATACTGGCTACATCAACTATGAC.................2311.001.00----------1.00--------------------------------------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAT..................................................................................................2011.007.00--------------------------------------------------1.00----------------------------------
...................................................................................................................................AAGTGGGAGGACAGGAGGCAGGAAT..............................................................................................2511.0011.00------------------------------1.00------------------------------------------------------
...................................................................................................................................AAGTGGGAGGACAGGAGGCAGGTAC..............................................................................................2511.003.00-------------------------------------1.00-----------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGGTAT..............................................................................................2411.0021.00---1.00---------------------------------------------------------------------------------
.........................................................................................................................................................................................................................CTACATCAACTATGACCAGCCG...........221.000.00-------------------------1.00-----------------------------------------------------------
....................................................................................................................................................................................................................................ATGACCAGCTGGAGGAGGACG.211.000.00-----1.00-------------------------------------------------------------------------------
..................................................................................................................................................................................................................................CTATGACCAGCTGGAGGAGAACGC2411.001.00-------1.00-----------------------------------------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGGTGTGGTTGG........................................................................................3011.001.00--------------1.00----------------------------------------------------------------------
...................................................................................................................................................................................................................................TATGACCAGCTGGAGGAGAACGCT241.000.00---1.00---------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TATGACCAGCTGGAGGAGA....1921.001.00-0.50--------------------------0.50--------------------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGGGAT..............................................................................................2411.003.001.00------------------------------------------------------------------------------------
.........................................................................................................................................................TGTGGTTGGAGGAAGCAGCCTGA..........................................................................2311.001.00---------------1.00---------------------------------------------------------------------
.............................................................................................................................................................................................................................ATCAACTATGACCAGCTGGAGGAG.....2421.001.00-0.50--------0.50--------------------------------------------------------------------------
.................................TGGTTGAGCAGGCTGAACACACCAATA..............................................................................................................................................................................................271.000.00----1.00--------------------------------------------------------------------------------
..................................................................................................................................CAAGTGGGAGGACAGGAGGCAG..................................................................................................2211.001.00------------------1.00------------------------------------------------------------------
...................................................................................................................................AAGTGGGAGGACAGGAGGCAA..................................................................................................2111.001.00------------------------------------------------------------------------------1.00------
...................................................................................................................................................................................TGCCTCCCTGACATTCCACAA..................................................2111.005.00--1.00----------------------------------------------------------------------------------
...................................................................................................................................................................................................................TACTGGCTACATCAACTATGA..................2111.001.00--------------------------------------------------------1.00----------------------------
................................................................................................................................TTCAAGTGGGAGGACAGGAGGCAT..................................................................................................241.000.00---------------1.00---------------------------------------------------------------------
......................................................................................................................................................AGGTGTGGTTGGAGGAAGCAGCCTGAACCTGC....................................................................3211.001.00------------------------------------------------------1.00------------------------------
................................................................................................................................................................................................................................AACTATGACCAGCTGGAGGAGAA...2321.001.00---0.50----0.50----------------------------------------------------------------------------
.................................................................................................................................................................................................................................ACTATGACCAGCTGGAGGAGAA...2221.001.00----0.50-----0.50--------------------------------------------------------------------------
...................................................................................................................................AAGTGGGAGGACAGGAGGCA...................................................................................................2011.001.00---1.00---------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TGACCAGCTGGAGGAGAACG.2011.001.00-1.00-----------------------------------------------------------------------------------
.............................TACTTGGTTGAGCAGGCCA..........................................................................................................................................................................................................191.000.00--------------------------------------------------------------1.00----------------------
.............................................................................................................................................................................................................................ATCAACTATGACCAGCTATCA........211.000.00--1.00----------------------------------------------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCATAA................................................................................................2211.007.00--1.00----------------------------------------------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGC....................................................................................................1811.001.00-------------1.00-----------------------------------------------------------------------
..............................................................................................................................................................................................................................TCAACTATGACCAGCTGGAGGAG.....2321.001.00-1.00-----------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................ACCAGCTGGAGGAGAACGC1911.001.00---1.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................................AACTATGACCAGCTGGAGGAGA....2221.001.00-1.00-----------------------------------------------------------------------------------
..................................................................................................................GTGGGTGGAGCCAGTTCAAGTGGGAGGA............................................................................................................2811.001.00---------------------------------------------------------1.00---------------------------
...................................................................................................................................................................................TGCCTCCCTGACATTCCACAGCA................................................2311.006.00----------------------------------------------------------------------------1.00--------
..................................................................................................................................................................................CTGCCTCCCTGACATTCCACAGT.................................................2311.002.00----------------------------------------------------------------------1.00--------------
................................................................................................................................................................................................................................AACTATGACCAGCTGGAGGAGAACG.2511.001.00---1.00---------------------------------------------------------------------------------
........................................................................................................................................................................CAGCCTGAACCTGCCTCCCTGACA..........................................................2411.001.00-1.00-----------------------------------------------------------------------------------
...................................................................................................................................................................................TGCCTCCCTGACATTCCACAGAC................................................2311.006.00-------------------------------------1.00-----------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGGTTAT.............................................................................................2511.0021.00----------------------------------------------------------------1.00--------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGGAAAA.............................................................................................2511.003.00-----------1.00-------------------------------------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGGTTTA.............................................................................................2511.0021.00-----------------------------------------------------------------------1.00-------------
.......................................................................................................................................................................................................................................ACCAGCTGGAGGAGAACG.1811.001.00--------1.00----------------------------------------------------------------------------
...............................................................................................................................................................................AACCTGCCTCCCTGACATTCCACAG..................................................2511.001.00--1.00----------------------------------------------------------------------------------
...................................................................................................................................AAGTGGGAGGACAGGAGGCAGA.................................................................................................2211.0012.00----------------------1.00--------------------------------------------------------------
...............................................................................................................................................................................................................................CAACTATGACCAGCTGGAGGAGAACGC2711.001.00----1.00--------------------------------------------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGGA................................................................................................2211.003.00--------------------------------------------------------------------------------1.00----
...................................................................................................................................AAGTGGGAGGACAGGAGGCAAA.................................................................................................2211.001.00---------------1.00---------------------------------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAAT.................................................................................................2111.007.00---------------------------------------------1.00---------------------------------------
.............................................................................................................TCATGGTGGGTGGAGCCAGT.........................................................................................................................2011.001.00------------------------------------1.00------------------------------------------------
....................................................................................................................................AGTGGGAGGACAGGAGGCAGGTTT..............................................................................................2411.0021.00-1.00-----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TGACCAGCTGGAGGAGAACGCT2211.001.00-1.00-----------------------------------------------------------------------------------
......................................................................................................................................................................................................................................GACCAGCTGGAGGAGAAC..1820.500.50----------0.50--------------------------------------------------------------------------
...................................................................................................................................................................................................................................TATGACCAGCTGGAGGAGAA...2020.500.50-0.50-----------------------------------------------------------------------------------
...........................................................................................................................................................................................................................ACATCAACTATGACCAGCTGGAGGAGA....2720.500.50-----------------------------------------0.50-------------------------------------------
..............................................................................................................................................................................................................................TCAACTATGACCAGCTGGAGGAGAAC..2620.500.50-0.50-----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................CAACTATGACCAGCTGGAGGAGAA...2420.500.50----0.50--------------------------------------------------------------------------------
...........................................................................................................................................................................................................................ACATCAACTATGACCAGCTGGAGG.......2420.500.50-----------------------------0.50-------------------------------------------------------
....................................................................................................................................................................................................................................ATGACCAGCTGGAGGAGAA...1920.500.50--------0.50----------------------------------------------------------------------------
....................................................................................................................................................................................................................................ATGACCAGCTGGAGGAGAAC..2020.500.50---------------------0.50---------------------------------------------------------------
.................................................................................................................................................................................................................................ACTATGACCAGCTGGAGGAGAATG.2420.501.00--------0.50----------------------------------------------------------------------------
................................................................................................................................................................................................................................AACTATGACCAGCTGGAG........1820.500.50-------0.50-----------------------------------------------------------------------------
..................................................................................................................................................................................................................................CTATGACCAGCTGGAGGA......1820.500.50--------0.50----------------------------------------------------------------------------
...................................................................................................................................AAGTGGGAGGACAGGAGG.....................................................................................................1820.500.50-------------0.50-----------------------------------------------------------------------
.....................................................................................................................................................................................................................................TGACCAGCTGGAGGAGAAC..1920.500.50-----0.50-------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TACATCAACTATGACCAGCTGGAG........2420.500.50-----------------------------------------0.50-------------------------------------------
..................................................................................................................................................................................................................................CTATGACCAGCTGGAGGAGA....2020.500.50----0.50--------------------------------------------------------------------------------
...............................................................................................................................................................................................................................CAACTATGACCAGCTGGAGG.......2020.500.50----0.50--------------------------------------------------------------------------------
....................................................................................................................................................................................................................ACTGGCTACATCAACTAT....................1820.500.50-0.50-----------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TCAACTATGACCAGCTGGAGGAGAA...2520.500.50----0.50--------------------------------------------------------------------------------
................................................................................................................................................................................................................................AACTATGACCAGCTGGAGGAGAC...2320.501.00-------0.50-----------------------------------------------------------------------------
.............................................................................................................................................................................................................................ATCAACTATGACCAGCTGGAGG.......2220.500.50----------------------------------------------------------------------------------0.50--
..................................................................................................................................CAAGTGGGAGGACAGGA.......................................................................................................1720.500.50--------------------------------------0.50----------------------------------------------
..............................................................................................................................................................................................................................TCAACTATGACCAGCTGGAGGA......2220.500.50-0.50-----------------------------------------------------------------------------------
..................................................................................................................................................................AGGAAGCAGCCTGAAC........................................................................1650.200.20-----------------------------------------------------------------------------------0.20-
..........................................................................................................................................................................................................................................AGCTGGAGGAGAACG.1550.200.20------------------------------------------------------------------------------------0.20

Antisense strand
TCCTCAGGGACTCCTGGGTCTGTGAGCCATACTTGGTTGAGCAGGCTGAACACACCAGTATCCATCCTGTCTCACCCTCAAGTCCTCATCTAGGACATCATTCCTCTTGTCATGGTGGGTGGAGCCAGTTCAAGTGGGAGGACAGGAGGCAGGTGTGGTTGGAGGAAGCAGCCTGAACCTGCCTCCCTGACATTCCACAGGTGAACCCAGATACTGGCTACATCAACTATGACCAGCTGGAGGAGAACGC
.....................................................................................................................................((((((...((((((((((((..(((((.......)))))...)))))))))).))...))))))....................................................
...............................................................................................................................128.....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189782SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR189786SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR189784SRR189783GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189785TAX577589(Rovira)
total RNA. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR029124(GSM416753)
HeLa. (hela)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR038854(GSM458537)
MM653. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
..............................................................................................................................................................TTGGAGGAAGCAGCCTAC.......................................................................... 183.000.00-----3.00-------------------------------------------------------------------------------
.....................................................................................................................GGTGGAGCCAGTTCAAGTGGGAG.............................................................................................................. 2311.001.00--------------------------------------1.00----------------------------------------------
...........................................................................................................................GCCAGTTCAAGTGGGAACAA........................................................................................................... 201.000.00-------------------------1.00-----------------------------------------------------------
.........................................................................................................................................................................................CCTGACATTCCACAGGCATG............................................. 201.000.00-----1.00-------------------------------------------------------------------------------