ID: hsa-mir-6768
GENE: C16orf59(7)
chr16:2513840-2514089+


(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(1)
AGO3.ip 		(2)
B-CELL 		(2)
BRAIN 		(9)
BREAST 		(26)
CELL-LINE 		(1)
FIBROBLAST 		(3)
HELA 		(4)
OTHER 		(2)
RRP40.ip 		(4)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CAGAGGGCCACCCCACAGAGGACTCCCTGCCAGCAAGTCCAGGCCCAAGACACACCATCTTGCATGGGGCTGTCCTGAAAGCCCACCTTTCTCCTAAAGGCAGGGCAGGTGGTGCAGATGCGGGAGGGCCAGGCACACAGGAAAAGCGGGGCCCTGGGTTCGGCTGCTACCCCAAAGGCCACATTCTCCTGTGCACACAGCGGTGGCGGAACAGCCACCAAGACCATGTCCTGTGGGGAGGCCCCCCGGA
.......................................................................................................................................(((((((.((....((((..((((.........))))....))))...)).))))))).........................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189786SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR189782SRR037940(GSM510478)
293cand5_rep2. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR189784DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		TAX577745(Rovira)
total RNA. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR343334SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR038861(GSM458544)
MM466. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................................CACACAGGAAAAGCGGGGCCCTGT.............................................................................................2418.008.004.00------2.00--------1.00---------------------------------1.00-
.....................................................................................................................................CACACAGGAAAAGCGGGGCCCTG..............................................................................................2318.008.00--5.00---------1.00-1.00-------------------------1.00-----------
.....................................................................................................................................CACACAGGAAAAGCGGGGCCCTGG.............................................................................................2416.006.005.00--------------1.00------------------------------------
...................................................................................................................................................................................CACATTCTCCTGTGCAC......................................................1716.006.00----6.00-----------------------------------------------
......................................................................................................................................ACACAGGAAAAGCGGGGCCCTGT.............................................................................................2315.001.00-----5.00----------------------------------------------
......................................................................................................................................ACACAGGAAAAGCGGGGCCCTGGT............................................................................................2414.002.00------3.00--------1.00------------------------------------
......................................................................................................................................ACACAGGAAAAGCGGGGCCCCGGG............................................................................................243.000.00---3.00------------------------------------------------
.....................................................................................................................................CACACAGGAAAAGCGGGGCCCT...............................................................................................2213.003.00-------2.00-----------------------------------1.00--------
...............................................................................................................................................................................AGGCCACATTCTCCTGTGC........................................................1913.003.00-----------2.00------------------------------------1.00---
......................................................................................................................................ACACAGGAAAAGCGGGGCCCTGA.............................................................................................2313.001.003.00---------------------------------------------------
......................................................................................................................................ACACAGGAAAAGCGGGGCCCTGG.............................................................................................2312.002.00-------------------------1.00--1.00-----------------------
......................................................................................................................................ACACAGGAAAAGCGGGGCCCTGGGT...........................................................................................2512.002.00---1.00-----------------1.00------------------------------
.....................................................................................................................................CACACAGGAAAAGCGGGG...................................................................................................1812.002.00-2.00--------------------------------------------------
.....................................................................................................................................CACACAGGAAAAGCGGGGCCCAA..............................................................................................2312.001.00-2.00--------------------------------------------------
......................................................................................................................................ACACAGGAAAAGCGGGGCCCTGGAAT..........................................................................................2611.002.00------1.00---------------------------------------------
............................................................................................................................................................................CAAAGGCCACATTCTCCTGTGCAC......................................................2411.001.00--1.00-------------------------------------------------
......................................................................................................................................ACACAGGAAAAGCGGGGCCTTG..............................................................................................221.000.00------------------------------------1.00---------------
......................................................................................................................................ACACAGGAAAAGCGGGGCTTAA..............................................................................................2211.001.00----------------------------------------------1.00-----
......................................................................................................................................ACACAGGAAAAGCGGGGCCCTGGA............................................................................................2411.002.00------------1.00---------------------------------------
.....................................................................................................................................CACACAGGAAAAGCGGGAAT.................................................................................................2011.001.00------------------------------------------1.00---------
......................................................................................................................................ACACAGGAAAAGCGGGGCCCTGGGTT..........................................................................................2611.001.001.00---------------------------------------------------
.....................................................................................................................................CACACAGGAAAAGCGGGGCC.................................................................................................2011.001.00-1.00--------------------------------------------------
.............................................................GCATGGGGCTGTCCTGAAAGC........................................................................................................................................................................2111.001.00-----------------------------------1.00----------------
.....................................................................................................................................CACACAGGAAAAGCGGGGCCCTGGGT...........................................................................................2611.001.00------------------------1.00---------------------------
......................................................................................................................................ACACAGGAAAAGCGGGGCCATGA.............................................................................................231.000.00---------------------------------1.00------------------
.....................................................................................................................................CACACAGGAAAAGCGGGGCCGTG..............................................................................................2311.001.00--1.00-------------------------------------------------
.......................................................................................................................................CACAGGAAAAGCGGGGCCCTGGG............................................................................................2311.001.00-------------1.00--------------------------------------
......................................................................................................................................ACACAGGAAAAGCGGGGCCTAC..............................................................................................221.000.00-----------------------------------------1.00----------
.....................................................................................................................................CACACAGGAAAAGCGGGGCCCTTA.............................................................................................2411.003.00-----------------------1.00----------------------------
.....................................................................................................................................CACACAGGAAAAGCGGG....................................................................................................1711.001.00-1.00--------------------------------------------------
.....................................................................................................................................CACACAGGAAAAGCGGCGCC.................................................................................................201.000.00------------------1.00---------------------------------
......................................................................................................................................ACACAGGAAAAGCGGGGCCCTGGC............................................................................................2411.002.00---1.00------------------------------------------------
.............................................................................................................................................................................AAAGGCCACATTCTCCTGTGCAC......................................................2311.001.00---------1.00------------------------------------------
...............................................................................................................................................................................AGGCCACATTCTCCTGTGCACT.....................................................2211.001.00-----------------1.00----------------------------------
.....................................................................................................................................CACACAGGAAAAGCGGGTAA.................................................................................................2011.001.00--------------------1.00-------------------------------
......................................................................................................................................ACACAGGAAAAGCGGGGCCCTGGGAT..........................................................................................261.000.00---1.00------------------------------------------------
...............................................................................................................................................................................AGGCCACATTCTCCTGTGCAC......................................................2111.001.00--------------------------1.00-------------------------
............................................................................................................................................................................CAAAGGCCACATTCTCCTGTGCA.......................................................2311.001.00------------------------------1.00---------------------
.....................................................................................................................................CACACAGGAAAAGCGGGGCCCTGGAT...........................................................................................2611.006.00-------------1.00--------------------------------------
.....................................................................................................................................CACACAGGAAAAGCGGGGCCCTTT.............................................................................................2411.003.00-----------------------------1.00----------------------
............................................................TGCATGGGGCTGTCCTATGC..........................................................................................................................................................................201.000.00-------------------------------------------------1.00--
.....................................................................................................................................CACACAGGAAAAGCGGGGCCC................................................................................................2111.001.00-1.00--------------------------------------------------
.............................................................................................................................................................................AAAGGCCACATTCTCCTGTGCA.......................................................2211.001.00--------------------------------------------1.00-------
............................................................................................................................................................................CAAAGGCCACATTCTCCTGTGC........................................................2211.001.00--------------------------------1.00-------------------
......................................................................................................................................ACACAGGAAAAGCGGGGC..................................................................................................1811.001.00-1.00--------------------------------------------------
......................................................................................................................................ACACAGGAAAAGCGGGGCCCTGTA............................................................................................2411.001.00-------------------------------1.00--------------------
...............................................................................................................................................................................AGGCCACATTCTCCTGTGCACA.....................................................2211.001.00---------------------------------------1.00------------
......................................................................................................................................ACACAGGAAAAGCGGGGCCCTGGAAA..........................................................................................2611.002.00---------------------------------------------1.00------
............................................................................................................................................................................CAAAGGCCACATTCTCCTG...........................................................1911.001.00---------1.00------------------------------------------
............................................................................................................................................................................CAAAGGCCACATTCTCCTGTG.........................................................2111.001.00--------------------------------------1.00-------------
...................................................................................................................AGATGCGGGAGGGCCAGGC....................................................................................................................1911.001.00----------------------1.00-----------------------------
......................................................................................................................................ACACAGGAAAAGCGGGGCCCTG..............................................................................................2211.001.00--------------1.00-------------------------------------
.....................................................................................................................................CACACAGGAAAAGCGGGGCCCCGGT............................................................................................2511.001.00---1.00------------------------------------------------
............................................................................................................................................................................CAAAGGCCACATTCTCCTGTGCAA......................................................2411.001.00----------------------------------1.00-----------------
.....................................................................................................................................CACACAGGAAAAGCGGGGCCCTGAA............................................................................................2511.008.00-----------------------------------------------1.00----
.....................................................................................................................................CACACAGGAAAAGCGGGGC..................................................................................................1911.001.00-1.00--------------------------------------------------
...........................................................TTGCATGGGGCTGTCCT..............................................................................................................................................................................1720.500.50----------------0.50-----------------------------------
..................................................................................................................CAGATGCGGGAGGGC.........................................................................................................................1550.200.20---------------------------------------------------0.20

Antisense strand
CAGAGGGCCACCCCACAGAGGACTCCCTGCCAGCAAGTCCAGGCCCAAGACACACCATCTTGCATGGGGCTGTCCTGAAAGCCCACCTTTCTCCTAAAGGCAGGGCAGGTGGTGCAGATGCGGGAGGGCCAGGCACACAGGAAAAGCGGGGCCCTGGGTTCGGCTGCTACCCCAAAGGCCACATTCTCCTGTGCACACAGCGGTGGCGGAACAGCCACCAAGACCATGTCCTGTGGGGAGGCCCCCCGGA
.......................................................................................................................................(((((((.((....((((..((((.........))))....))))...)).))))))).........................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189786SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR189782SRR037940(GSM510478)
293cand5_rep2. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR189784DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		TAX577745(Rovira)
total RNA. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR343334SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR038861(GSM458544)
MM466. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................................................................................................................CAAAGGCCACATTCTCCTGA.......................................................... 2016.000.00--------3.00-3.00-----------------------------------------
...............................................AGACACACCATCTTGCGGT........................................................................................................................................................................................ 191.000.00---------------------------1.00------------------------
.................................................................................CCCACCTTTCTCCTAGTC....................................................................................................................................................... 181.000.00-------------------1.00--------------------------------
.........ACCCCACAGAGGACTCCCAGTC........................................................................................................................................................................................................................... 221.000.00---------1.00------------------------------------------
...........................................................................................................................................................................CCAAAGGCCACATTCTCCTGT.......................................................... 2111.001.00-------------------------------------1.00--------------