ID: hsa-mir-6755
GENE: EED(10)
chr11:85988984-85989490+


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(4)
AGO2.ip
(2)
AGO3.ip
(7)
B-CELL
(5)
BRAIN
(17)
BREAST
(38)
CELL-LINE
(2)
FIBROBLAST
(9)
HEART
(8)
HELA
(1)
KIDNEY
(4)
LIVER
(3)
OTHER
(1)
RRP40.ip
(55)
SKIN
(2)
UTERUS
(2)
XRN.ip

Sense strand
GGCAAACTTTATGTTTGGGATTTAGAAGTAGAAGATCCTCATAAAGCCAAGTAAGTATTTAGAAATTTCTGTTCAAAATTTCAGGCTTTTTCTCCACACTTGTATGCCAATGTAGAGAAGATCATTTATATTTGCAGTGCCATCCTTAAGTCATTTTTAACATTTACTGTTTTCAGAGTTAAAGTTATTCTTTTTTATTCCAATAATTTTTGTTTTTCCTAAGTACCTTGGTGACAAGTCATTTCTTGTTTTTATACAAATTATGTAGTGCTTGTTGAACTTAAAATATATCTAAATTTTATAAAATTTGAGACTGAGCTCTTAGTGAAGTATATTCTGGTTTTAAGTGCTTTTCGTATGACTTGGAACATCTGCTTATTTTCTAATCCGCTGTTTTAGGGTAGACACTGACAACGTTATGTGTGGTCTTTAACCTGTTGTCATGTTTTTTCCCTAGATGTACAACACTGACTCATCATAAATGTGGTGCTGCTATTCGACAAACCA
............................................................................................................................................................................................................................................................................................................................................................................................................(((((.(((((.((((((((........(((.....))))))))))))))))...)))))...................................................
.......................................................................................................................................................................................................................................................................................................................................................................................................392..............................................................457................................................
SizePerfect hitTotal NormPerfect NormGSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR189782SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR189786SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189787SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR189785SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189784SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)
SRR037935(GSM510473)
293cand3. (cell line)
SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR029126(GSM416755)
143B. (cell line)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)
TAX577453(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577588(Rovira)
total RNA. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
GSM359175(GSM359175)
hela_5_pct. (hela)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)
TAX577741(Rovira)
total RNA. (breast)
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAACGTT.........................................................................................221187.00187.0012.0032.002.00-11.006.001.0011.009.003.006.002.004.00-4.003.003.003.00-2.001.002.001.002.005.005.00-2.002.001.001.00-2.002.003.001.00--2.00--2.001.003.001.00--1.00-1.00--1.00--3.00-1.001.001.00-----1.001.00---3.00--1.001.00---2.00--1.00----1.001.00-------1.001.001.00---1.00-----1.00----1.00---------1.00---1.00-1.00-1.00-----1.00-1.00---1.00-------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAACGTT.........................................................................................23189.0089.0028.007.0010.00-1.00-4.001.003.005.001.001.001.002.001.00-----1.00-1.00----1.00-1.00-3.001.002.001.001.00---------1.00-1.001.001.00-----1.00------------------------1.00---------1.00-----1.00-1.00--------------------1.001.00-------------------------------1.00---
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTAGGGTAGACACTGACAACG...........................................................................................22176.0076.009.0014.00-2.001.006.002.001.002.002.00-2.001.005.00-----1.00---4.00-------3.001.00--1.00--1.00---2.00--1.002.002.00----1.00-----1.00----1.001.00--------------------2.00--1.00--------------------------1.00--1.00----1.00------------------------------1.00-
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAACGT..........................................................................................22175.0075.006.006.0022.00-2.0011.006.001.00-1.00--1.001.001.00-----1.00------1.00--1.00-1.00----------1.00-1.001.00-----1.00---------------------1.00-1.00------1.00-----1.00---1.00------1.00-----------------------1.00-------------------1.00--------1.00--
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAACG...........................................................................................21138.0038.008.004.00--4.00-2.00----1.00--------1.00-------1.001.001.00---1.00--1.001.00--1.00---------1.00-------1.001.00--1.00---1.00------------1.00---1.00---------------------1.00------1.00-----------------1.00-------------1.00----------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAACGT..........................................................................................21133.0033.00-8.003.00---3.00-----1.00--2.003.001.00--1.00-1.00--1.00--1.002.001.00------2.00----1.00---------------1.001.00------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTCATGTTTTTTCCCTAGT.................................................23128.0019.00---9.00------1.00---------1.00-1.00---1.00--------1.00--------1.00------1.00-----3.00------1.001.00-----1.00-----------1.00-------1.00------------1.00-----1.001.00-----------------------------1.00--------------
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTAGGGTAGACACTGACAACGTT.........................................................................................24128.0028.0019.004.001.00----1.00--1.00----------------------2.00--------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTAGGGTAGACACTGACAACGT..........................................................................................23119.0019.001.00-6.00-3.00-1.00---1.001.00----------------------1.001.00-----1.00-1.00---------------------1.00-------------------------------------1.00----------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTCATGTTTTTTCCCTAG..................................................22119.0019.00---15.00-2.00-----------------------------------------------------------------------2.00------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAACGTTA........................................................................................23118.0018.00-3.00-1.00-----------1.00---1.00-1.00---1.00----2.00-1.00-----1.00----------1.00----------1.00------1.00------------------1.00----------1.00----------1.00-----------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAACG...........................................................................................20114.0014.002.00------2.00------1.00----2.00-1.00-----1.001.00-------------------1.00----------------------1.00---1.00-----------------1.00--------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTTAGGGTAGACACTGACAACG...........................................................................................23112.0012.005.001.00----1.00----1.00------------------------------------2.00------------------1.00--------1.00-------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAAC............................................................................................2019.009.00-2.00--1.00--1.00----1.00----------------------------1.00-------1.00----------------------1.00------------------1.00----------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................AGGGTAGACACTGACAACGTT.........................................................................................2117.007.004.002.00-------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTTAGGGTAGACACTGACAAC............................................................................................2217.007.00-------1.00---2.00---------1.00-1.00------------------1.00--------------------------------------------1.00--------------------------------------------------------------------
................GGGATTTAGAAGTAGAAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.006.00----------------------------------------2.00---1.00-----3.00---------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTAGGGTAGACACTGACAAC............................................................................................2116.006.00----------1.00--------1.00----1.00------------2.00----------------------------------------------------------------------------------------------------------------1.00-----
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTTAGGGTAGACACTGACA..............................................................................................2015.005.003.001.00--------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAACGA..........................................................................................2215.0038.00------4.00--------------1.00--------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAACGTTATGT.....................................................................................2615.005.00-----5.00------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................AATTTTATAAAATTTGAGACTG...............................................................................................................................................................................................2215.005.00----------------1.00-------------------4.00-----------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAACGTTA........................................................................................2415.005.00------1.00--2.00-----1.00--------------------------------------------1.00-----------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAACGTTAT.......................................................................................2415.005.00----2.00------------1.00--------------------------1.00-----------------------------------------------1.00---------------------------------------------------------------
........TTATGTTTGGGATTTAGAAGTAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.004.00-4.00----------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTAGGGTAGACACTGACA..............................................................................................1914.004.002.00-1.00----1.00----------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAAC............................................................................................1914.004.00----1.00-------1.00---------------------------------------------------------------------------------2.00-------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAACGTATC.......................................................................................2513.0075.00-----------------------------------------------------3.00------------------------------------------------------------------------------------------------------
............GTTTGGGATTTAGAAGTAGAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................233.000.00---------------------------------------3.00--------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTCATGTTTTTTCCCTAGC.................................................2313.0019.00----2.00-------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTAGGGTAGACACTGACAACA...........................................................................................2213.006.002.00-----------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAACGTTAT.......................................................................................2513.003.00----2.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTCATGTTTTTTCCCTAGA.................................................2313.003.00-2.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...............TGGGATTTAGAAGTAGAAGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002.00--------------------------1.00------------1.00--------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................AGACTGAGCTCTTAGTGAAG.................................................................................................................................................................................2012.002.00----------------------1.00-----------------------1.00-------------------------------------------------------------------------------------------------------------
......................TAGAAGTAGAAGATCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1712.002.00----------------------------------------------------------------------------------2.00-------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGTCATGTTTTTTCCCTAGT.................................................2412.001.00---2.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...........TGTTTGGGATTTAGAAGTAGAAGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002.00--------------------------2.00---------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTCATGTTTTTTCCCT....................................................2012.002.00---1.00-------------1.00------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGTTGTCATGTTTTTTCCCT....................................................2312.002.00-----------------2.00------------------------------------------------------------------------------------------------------------------------------------------
......................TAGAAGTAGAAGATCCTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002.00--------------------------------------------------------------------------------------------------------------------------------------------1.00------1.00--------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAACGTTT........................................................................................2312.00187.001.00--------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
........TTATGTTTGGGATTTAGAAGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002.00--------------------------------------------------------------2.00---------------------------------------------------------------------------------------------
.........................AAGTAGAAGATCCTCATAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002.00---------------------------------------------------------------------2.00--------------------------------------------------------------------------------------
......................................................................GTTCAAAATTTCAGGCTTTTTCTCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................2612.002.00-----------------------------------------------------------------------------------------------1.00---------------------------------1.00--------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAACGTCAT.......................................................................................2412.0033.00------------------2.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TTAAAGTTATTCTTTTTTATTCCAATAATTT..........................................................................................................................................................................................................................................................................................................3112.002.00--------------------------------------------------------2.00---------------------------------------------------------------------------------------------------
............GTTTGGGATTTAGAAGTAGAAGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002.00--------------------------2.00---------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCATGTTTTTTCCCTAGTTT...............................................2312.001.00---1.00---------1.00----------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAACGG..........................................................................................2212.0038.00--1.00-----1.00---------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................AATTTCAGGCTTTTTCTCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................2012.002.00---------------------------1.00--------------------------------------------1.00-----------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAACGTTATGTGTGGTCTTTAACC........................................................................3912.002.00-----2.00------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAACGCT.........................................................................................2312.0038.001.00------------------------------------------------------------1.00----------------------------------------------------------------------------------------------
.........................AAGTAGAAGATCCTCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.501.50---------------------------------------1.00----------------------------------------------------------0.50---------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTCATGTTTTTTTTA.....................................................191.000.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTTGTCATGTTTTTTCCCTAG..................................................2411.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCATGTTTTTTCCCTAG..................................................2011.001.00------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTAACCTGTTGTCATG..............................................................1811.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.............TTTGGGATTTAGAAGTAGAAGATCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.00-------------------------------------------------------------------------------------------------------------------------1.00----------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTCATGTTTTTTCCCTATT.................................................231.000.00-------------------------------------------------------------------------------------------------------------1.00----------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCATGTTTTTTCCCTAGTT................................................2211.001.00-------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
................GGGATTTAGAAGTAGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00---------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGGTGCTGCTATTCGACA.....2211.001.00------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAAACT..........................................................................................211.000.00--------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTTAGGGTAGACACTGACAACGT..........................................................................................2411.001.00--1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGCTGCTATTCGACAAACC.2311.001.00--------------------------------------------------------------1.00---------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCATCATAAATGTGGTGCTG...............2211.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAAAGTT.........................................................................................221.000.00--------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
........TTATGTTTGGGATTTAGAAGTAGAAGATCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.001.00-----------------------------------------------------------------------------------------------------------------------------------------------1.00------------
....................................................................................................................................................................................................................................................................................................................................................................TATGACTTGGAACATCTGCTTATTTTCTAA.........................................................................................................................3011.001.00---------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAACCTT.........................................................................................2211.004.00---------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACA..............................................................................................1811.001.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................TAGTGAAGTATATTCTGGTTTTAAGTGC.............................................................................................................................................................2811.001.00-----------------------------------------------------------------------------------------------------------------------------------------1.00------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTCATGTTTTTTCCCGAG..................................................221.000.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................ATATTCTGGTTTTAAGTGC.............................................................................................................................................................1911.001.00------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
....................................................................CTGTTCAAAATTTCAGGCTTTTTCTCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00---------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCATGTTTTTTCCCTATTTT...............................................231.000.00---------------------------------------------------------------------------------------------------------------------1.00--------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAACGTTATGTGTGGTCTTTAACCTGTTGTCATGTTTTTTCCCTAG..................................................6211.001.00------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTCATGTTTTTTGTTC....................................................201.000.00------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGTCATGTTTTTTCCCTAG..................................................2311.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
....AACTTTATGTTTGGGATTTAGAAGTAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
..................GATTTAGAAGTAGAAGATCCTCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-------------------------------------------------------------------------------------------------------------------------------------1.00----------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAACGCTAT.......................................................................................2411.0014.00-------------------------------------------------------------1.00----------------------------------------------------------------------------------------------
........................................................................TCAAAATTTCAGGCTTTTTCTCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAACGTTACGT.....................................................................................2611.0018.00------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAACGCTAT.......................................................................................2511.0038.00-------------------------------------------------------------1.00----------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAACGTTATGTGTGGTC...............................................................................3311.001.00----------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAACACTGACTCATCATAAAT........................2411.001.00---------------------------------------------------------------------------------------------------1.00--------------------------------------------------------
...............TGGGATTTAGAAGTAGAAGATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
...............TGGGATTTAGAAGTAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00--------------------------------------------------1.00---------------------------------------------------------------------------------------------------------
........................................................................................................................................................................GTTTTCAGAGTTAAACGA.................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------------------------------------------------1.00----------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAACGTA.........................................................................................2311.0075.00-------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TTTTCCTAAGTACCTTGG....................................................................................................................................................................................................................................................................................1811.001.00------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................TTGGAACATCTGCTTATTTTCT...........................................................................................................................2211.001.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
............GTTTGGGATTTAGAAGTAGAAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00--------------------------------------------------------------------------------------------------------------------1.00---------------------------------------
.....................................................................................................................................................................................................................................................................................AACTTAAAATATATCTAAATTTTATAAAATTTG.....................................................................................................................................................................................................3311.001.00--------------------------------------------------------------------------------------------------------------------------------------------------1.00---------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGTCATGTTTTTTCCCT....................................................2111.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAACGTTATGT.....................................................................................2711.001.00---------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
...............TGGGATTTAGAAGTAGAAGATCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.002.00---------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
.........TATGTTTGGGATTTAGAAGTAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00--------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
..CAAACTTTATGTTTGGGATTTAGAAGTAGAAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3311.001.00-------------------------------------------------------------------------------------------------------------------------------------------1.00----------------
...AAACTTTATGTTTGGGATTTAGAAGTAGAAGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3411.001.00------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAACGTC.........................................................................................2211.0033.00------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................AGTGAAGTATATTCTGGTTTTAAGTGC.............................................................................................................................................................2711.001.00----------------------------------------------------------------------------------------1.00-------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCTGTTTTAGGGTAGACACTGAC...............................................................................................2711.001.00-----------------------------------------------------------------------------------------------------------------------------1.00------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTAGGGTAGACACTGACAA.............................................................................................2011.001.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...............TGGGATTTAGAAGTAGAAGATCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00---------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
......CTTTATGTTTGGGATTTAGAAGTAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00---------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................TTCTTTTTTATTCCACGCT.............................................................................................................................................................................................................................................................................................................191.000.00--------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TAGGGTAGACACTGACAACGTTATGTGT...................................................................................2811.001.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTAGGGTAGACACTGACAACGC..........................................................................................2311.0076.00------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACTGACTCATCATAAATG.......................2111.001.00---------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
................GGGATTTAGAAGTAGAAGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00----------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
.......................AGAAGTAGAAGATCCTCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00--------------------------------------------------------------------1.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTACAACACTGACTCATC..............................2011.001.00----------------------------------------------------------------------------------------------------------------------------------------------------1.00-------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAACGTCAT.......................................................................................2511.0075.00------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
.................GGATTTAGAAGTAGAAGATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
.........................AAGTAGAAGATCCTCATAAAGCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00--------------------------------------------------------------------------------------------------------------------------------------1.00---------------------
............................................................................................................................................................................................................................................................................................................................................TATTCTGGTTTTAAGTGC.............................................................................................................................................................1811.001.00---------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................GGGTAGACACTGACAAC............................................................................................1711.001.00----------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
...........................................................................AAATTTCAGGCTTTTTCTCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
......................TAGAAGTAGAAGATCCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---------------------------------------------------------------------------1.00--------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................GAAGTATATTCTGGTTTTAAGTGC.............................................................................................................................................................2411.001.00----------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACAACACTGACTCATCATAAATGTG.....................2811.001.00---------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................AAATTTTATAAAATTTGAGACTGAGCT...........................................................................................................................................................................................2711.001.00-----------------------------1.00------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................TATAAAATTTGAGACTG...............................................................................................................................................................................................1711.001.00----------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
...............TGGGATTTAGAAGTAGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
.GCAAACTTTATGTTTGGGATTTAGAAGTAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.001.00----------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGGTGCTGCTATTCG........1911.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTCATGTTTTTTCCCTTGT.................................................2311.002.00------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
...................ATTTAGAAGTAGAAGGATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--------------------------------------------------------------------1.00---------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................TCTAAATTTTATAAAACTTT.....................................................................................................................................................................................................201.000.00--------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
...............TGGGATTTAGAAGTAGAAGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................AGTGCTTGTTGAACTTATAGT............................................................................................................................................................................................................................211.000.00---------------------------------------------------------------------------------------------------------------------------------------1.00--------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGGTAGACACTGACAACGTTATG......................................................................................2611.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------1.00----
................................AGATCCTCATAAAGCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.500.50-----------------------------------------------------------------------------------------------------------------------------------------------------------0.50
...................................................................................................................................................................................................................................................................................................................................................................................................CCGCTGTTTTAGGG..........................................................................................................1450.200.20----------------------------------------------------------------------------------------------------0.20-------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................TCTGGTTTTAAGTGC.............................................................................................................................................................15100.200.20----------------------0.10------------------------------------------------------------------------------0.10------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................CCGCTGTTTTAGG...........................................................................................................13100.100.10----------------------------------------------0.10-------------------------------------------------------------------------------------------------------------

Antisense strand
GGCAAACTTTATGTTTGGGATTTAGAAGTAGAAGATCCTCATAAAGCCAAGTAAGTATTTAGAAATTTCTGTTCAAAATTTCAGGCTTTTTCTCCACACTTGTATGCCAATGTAGAGAAGATCATTTATATTTGCAGTGCCATCCTTAAGTCATTTTTAACATTTACTGTTTTCAGAGTTAAAGTTATTCTTTTTTATTCCAATAATTTTTGTTTTTCCTAAGTACCTTGGTGACAAGTCATTTCTTGTTTTTATACAAATTATGTAGTGCTTGTTGAACTTAAAATATATCTAAATTTTATAAAATTTGAGACTGAGCTCTTAGTGAAGTATATTCTGGTTTTAAGTGCTTTTCGTATGACTTGGAACATCTGCTTATTTTCTAATCCGCTGTTTTAGGGTAGACACTGACAACGTTATGTGTGGTCTTTAACCTGTTGTCATGTTTTTTCCCTAGATGTACAACACTGACTCATCATAAATGTGGTGCTGCTATTCGACAAACCA
............................................................................................................................................................................................................................................................................................................................................................................................................(((((.(((((.((((((((........(((.....))))))))))))))))...)))))...................................................
.......................................................................................................................................................................................................................................................................................................................................................................................................392..............................................................457................................................
SizePerfect hitTotal NormPerfect NormGSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR189782SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR189786SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029131(GSM416760)
MCF7. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189787SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR189785SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189784SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)
SRR037935(GSM510473)
293cand3. (cell line)
SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR029126(GSM416755)
143B. (cell line)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)
TAX577453(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577588(Rovira)
total RNA. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
GSM359175(GSM359175)
hela_5_pct. (hela)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)
TAX577741(Rovira)
total RNA. (breast)
........TTATGTTTGGGATTTCTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 194.000.00------------------------------------------------------4.00-----------------------------------------------------------------------------------------------------
......................................................................GTTCAAAATTTCAGGTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................. 192.000.00----1.00------------------------------------------------------------------------------------1.00------------------------------------------------------------------
........TTATGTTTGGGATTTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 171.000.00-------------------------------------------------------------------------1.00----------------------------------------------------------------------------------
............................................................................................................................TTTATATTTGCAGTGCCATCCTT........................................................................................................................................................................................................................................................................................................................................................................ 2311.001.00--------------------------------------------------------------------------------------------1.00---------------------------------------------------------------
............................TAGAAGATCCTCATAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 1811.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------1.00------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGGTGCTGCTAATTT........ 191.000.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGGTGCTGCTAGTT......... 181.000.00---------------------------------------------------------------------------------------------------------1.00--------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................GTTTTAAGTGCTTTTCTA...................................................................................................................................................... 181.000.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................CTGAGCTCTTAGTGAGATC............................................................................................................................................................................... 191.000.00-----------------------------------------------------1.00------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................GTTGAACTTAAAATATGATC...................................................................................................................................................................................................................... 201.000.00-------------------------------------------------------------------------------1.00----------------------------------------------------------------------------
...........................................................................................................................................CCATCCTTAAGTCATTGATG............................................................................................................................................................................................................................................................................................................................................................ 201.000.00--------------------------------------------------------------------1.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................CTGAGCTCTTAGTGAGAA................................................................................................................................................................................ 181.000.00-------------------------------------------------------------------------------------------------------------------------------1.00----------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................TTTTCTAATCCGCT................................................................................................................... 1440.250.25---------------------------------------------------------------------------------------------------0.25--------------------------------------------------------
..........................................................................................................................................GCCATCCTTAAGTCA.................................................................................................................................................................................................................................................................................................................................................................. 1550.200.20----------------------0.20-------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TCTTGTTTTTATACAA........................................................................................................................................................................................................................................................ 1660.170.17----------------------0.17-------------------------------------------------------------------------------------------------------------------------------------