ID: hsa-mir-6749
GENE: ATG2A(13)
chr11:64669809-64670031-


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(4)
AGO2.ip
(3)
BRAIN
(21)
BREAST
(27)
CELL-LINE
(8)
CERVIX
(2)
FIBROBLAST
(6)
HEART
(3)
LIVER
(3)
OTHER
(44)
SKIN

Sense strand
CCCCACCCCGGCCCCCCAGCCCCACGGAGATCGCCGGCCAGAAGGTACAGGTGAGGCCTGGCCACACAGGCTACCAGAGCTCGGCCAGGCCCCTCCCCTGCCATGGCCCTCGGGCCTGGGGTTGGGGGAGCTCTGTCCTGTCTCACTCATTGCTCCTCCCCTGCCTGGCCCAGCTCTCGGAGAGTCCTGCCTCTCTGCCCTCGTGCCCCCCAGTGGAGACGGC
...............................................................................................................(((((..((((.((((((((..((............))..))))))))...)))))))))....................................................
........................................................................................................105.................................................................173................................................
SizePerfect hitTotal NormPerfect NormSRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM532874(GSM532874)
G699T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040014(GSM532899)
G623N. (cervix)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR040011(GSM532896)
G529T. (cervix)
SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR040013(GSM532898)
G648T. (cervix)
GSM532876(GSM532876)
G547T. (cervix)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925F181A(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)
SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR037936(GSM510474)
293cand1. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR040020(GSM532905)
G699N_2. (cervix)
GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
GSM532873(GSM532873)
G699N. (cervix)
SRR191488(GSM715598)
14genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR038854(GSM458537)
MM653. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR189784SRR207111(GSM721073)
Whole cell RNA. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR029126(GSM416755)
143B. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCAGT.................................................22133.001.00--2.00---1.002.001.001.00--1.001.00-1.00---1.002.001.00-2.00-2.00--1.00-1.001.00---1.00----------1.00-1.00-------1.001.00---1.001.00-----1.00-------------------1.00--1.00---------1.00-----1.00-----------
.............................................................................................................TCGGGCCTGGGGTTGGGGGAGC............................................................................................22125.0025.0010.009.001.00-1.00------------1.00-----------1.00------------------------------------1.00------1.00---------------------------------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCAGA.................................................21213.005.00--1.00--1.00-1.002.001.00--------------1.00-1.00-----------------1.00----1.00-----------------1.00-1.00----1.00--------------------------------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCAGTA................................................2228.005.00-----1.001.00----1.00---------------2.00--------------------------1.00-----------------------------------------------------1.001.00---------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCAGTT................................................2316.001.00---1.00--------1.00----------------------------------------------------------1.00----------1.00-1.00-------------------1.00--------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCAG..................................................2025.005.00--0.50-----------0.500.50-------------0.50-0.50---------------------------------------------------------1.00--------------------0.500.500.50------
............................................................................................................CTCGGGCCTGGGGTTGGGGGAGC............................................................................................2314.004.001.001.00--------------1.00----------------------------------------------------------------------------------1.00-------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCAGTTT...............................................2324.005.00----------------------2.00---1.00---------1.00----------------------------------------------------------------------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCAGTT................................................2224.005.00----1.00-------------------------------------------------------------------1.00--------------------1.001.00------------------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCAGA.................................................2214.001.00----2.00--------1.00------------------1.00--------------------------------------------------------------------------------------
..............................................................................................................CGGGCCTGGGGTTGGGGGAGC............................................................................................2113.003.00--1.00------1.00------------------------------------------1.00------------------------------------------------------------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCATTT................................................232.000.00---------------------1.00-----------------------------1.00-------------------------------------------------------------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCCGT.................................................2212.001.00--------------------------------------1.00----------------------------------------------1.00---------------------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCAGTTTT..............................................2422.005.00--------------1.00------------------------------------------------1.00-------------------------------------------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCAGC.................................................2112.002.00----------------------------------------1.00-----------------------------------------------------------1.00------------------
.............................................................................AGCTCGGCCAGGCCCCTCAG..............................................................................................................................202.000.00----------2.00------------------------------------------------------------------------------------------------------------
...................................................................................................................................TCTGTCCTGTCTCACTCATTGC......................................................................2212.002.00-----------1.00---------------------------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................TTGCTCCTCCCCTGCCTGGCCCAGT.................................................252.000.00--------------------------------------------------1.00----------------------------------------------1.00---------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCAGTAT...............................................2322.005.00---1.00------------------------------------------------------------------1.00------------------------------------------------
...........................................................................................................CCTCGGGCCTGGGGTTGGGGGAGC............................................................................................2412.002.00-----------------------------------------1.00------------------------------------------------------------1.00----------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCAGTTT...............................................2412.001.00---------------1.00-----------------------------------------------------------------------------------------1.00-------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCAGTTGA..............................................2421.005.00----------------------------------------------------------------1.00------------------------------------------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCCGT.................................................211.000.00------------------------------------------------------------1.00----------------------------------------------------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCAGTTGT..............................................2511.001.00-----1.00-----------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCAA..................................................2031.000.67--------------------------------0.33--0.33---------------------------------------------------------------------------------0.33-
...........................................................................................................CCTCGGGCCTGGGGTTGGGGGAG.............................................................................................2311.001.00--1.00--------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCAGAAA...............................................2411.001.00--------------------------------------------------------------------------------------------------1.00--------------------
.........................GGAGATCGCCGGCCAGAAGGTA................................................................................................................................................................................2211.001.00----------------------------1.00------------------------------------------------------------------------------------------
............................................................................................................CTCGGGCCTGGGGTTCCA.................................................................................................181.000.00-----------------------------------------------------------------------------------------------1.00-----------------------
.........GGCCCCCCAGCCCCACGGAGATCGCC............................................................................................................................................................................................2611.001.00-----------------------------------------------1.00-----------------------------------------------------------------------
..........................GAGATCGCCGGCCAGAAGCTC................................................................................................................................................................................211.000.00---1.00-------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................TGCTCCTCCCCTGCCTGGCCCAT..................................................231.000.00-----------------------------------------------------------------------------1.00-----------------------------------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCAGTAA...............................................2411.001.00-------------1.00---------------------------------------------------------------------------------------------------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCCGTC................................................2311.001.00-------------------------------------------------------1.00---------------------------------------------------------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCAGAA................................................2311.001.00----------------1.00------------------------------------------------------------------------------------------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCAGTGT...............................................2321.005.00---------------------------------------------------------------------------------------1.00-------------------------------
.....................CCACGGAGATCGCCGGCCA.......................................................................................................................................................................................1911.001.00------------------------------------------------------------------------------------------------1.00----------------------
.............................................................................................................................................................................CTCTCGGAGAGTCCTGC.................................1711.001.00-------------------------------------1.00---------------------------------------------------------------------------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCAT..................................................211.000.00--------------------------------------------------------------------------------------------1.00--------------------------
.....................................................................................................................................................TTGCTCCTCCCCTGCCTGGCC.....................................................2111.001.00-----------1.00-----------------------------------------------------------------------------------------------------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCATA.................................................221.000.00--------------1.00--------------------------------------------------------------------------------------------------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCAG..................................................2111.001.00-------------------1.00---------------------------------------------------------------------------------------------------
......................................................................................................................................................TGCTCCTCCCCTGCCTGGCCCAGT.................................................241.000.00-------------------------------------------------------------------------------------------------------1.00---------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCAGTA................................................2311.001.00----------------------------------1.00------------------------------------------------------------------------------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCAGATT...............................................2411.001.00------1.00----------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCTTT.................................................211.000.00-----------------------------------------------------------1.00-----------------------------------------------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCAGAAA...............................................2321.005.00----------------------------------------------------------1.00------------------------------------------------------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCC....................................................1911.001.00--------------------------------------------------------------------------------------1.00--------------------------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCATT.................................................221.000.00------------1.00----------------------------------------------------------------------------------------------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCAGAA................................................2221.005.00-----------------------------------------------------------------------------------1.00-----------------------------------
.....................................................................................................................................................TTGCTCCTCCCCTGCCTGGCCCAT..................................................241.000.00----------------------------------------------------------------------------------------------------------1.00------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCCGA.................................................211.000.00------------------------1.00----------------------------------------------------------------------------------------------
...........................................................................................................................................................CTCCCCTGCCTGGCCCAAA.................................................191.000.00-----------------------------------------------------1.00-----------------------------------------------------------------
...........................................................................AGAGCTCGGCCAGGCCGG..................................................................................................................................181.000.00---1.00-------------------------------------------------------------------------------------------------------------------
..............CCCAGCCCCACGGAGATCGCCGGC.........................................................................................................................................................................................2411.001.00---------------------------------------------1.00-------------------------------------------------------------------------
........................................................................................................................................................CTCCTCCCCTGCCTGGCCCAGTAT...............................................2411.001.00------------------------------------------------------------------------------1.00----------------------------------------
...................................................................................................................................TCTGTCCTGTCTCACTCATTTT......................................................................221.000.00-----1.00-----------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCAGATT...............................................2321.005.00-------------------------------------------------------------------------------1.00---------------------------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCAAGG.................................................211.000.00--------------------------------------------------------------------------------1.00--------------------------------------
.............................................................................................................................................................................CTCTCGGAGAGTCCTGCCTC..............................2011.001.00----------------------------------------------------------------------------1.00------------------------------------------
.......................................................................................................................GGTTGGGGGAGCTCTGGAC.....................................................................................191.000.00-----------------1.00-----------------------------------------------------------------------------------------------------
......................CACGGAGATCGCCGGCCAGAAGGTA................................................................................................................................................................................2511.001.00------------------------------------------------------------------------------------------1.00----------------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCA...................................................1930.670.67----------------0.33-------------------------------------------------------------------------------------------------0.33----
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCATA.................................................2130.670.67----------------------------------0.33--------------------------------------------------------------------------------0.33---
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCATTT................................................2230.670.67---0.33----------------------------------------------------------------------------------------------------------------0.33--
........................CGGAGATCGCCGGC.........................................................................................................................................................................................1420.500.50------------------------------0.50----------------------------------------------------------------------------------------
................................................................................................................................................................................................................CCCAGTGGAGACGGC1530.330.33---------------------------------0.33-------------------------------------------------------------------------------------
.........................................................................................................................................................TCCTCCCCTGCCTGGCCCAAT.................................................2130.330.67-----------------------------------------------------------------------------------------------------------------0.33-----
.........................................................................................................................................................TCCTCCCCTGCCTGGC......................................................1690.220.22------------------------------------0.22----------------------------------------------------------------------------------
..............................................................................................................CGGGCCTGGGGTTGGG.................................................................................................1650.200.20----------------------------------------------------------------------------------------------------------------------0.20

Antisense strand
CCCCACCCCGGCCCCCCAGCCCCACGGAGATCGCCGGCCAGAAGGTACAGGTGAGGCCTGGCCACACAGGCTACCAGAGCTCGGCCAGGCCCCTCCCCTGCCATGGCCCTCGGGCCTGGGGTTGGGGGAGCTCTGTCCTGTCTCACTCATTGCTCCTCCCCTGCCTGGCCCAGCTCTCGGAGAGTCCTGCCTCTCTGCCCTCGTGCCCCCCAGTGGAGACGGC
...............................................................................................................(((((..((((.((((((((..((............))..))))))))...)))))))))....................................................
........................................................................................................105.................................................................173................................................
SizePerfect hitTotal NormPerfect NormSRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM532874(GSM532874)
G699T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040014(GSM532899)
G623N. (cervix)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR040011(GSM532896)
G529T. (cervix)
SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR040013(GSM532898)
G648T. (cervix)
GSM532876(GSM532876)
G547T. (cervix)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925F181A(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)
SRR191393(GSM715503)
22genomic small RNA (size selected RNA from t. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR037936(GSM510474)
293cand1. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR040020(GSM532905)
G699N_2. (cervix)
GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
GSM532873(GSM532873)
G699N. (cervix)
SRR191488(GSM715598)
14genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR038854(GSM458537)
MM653. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR189784SRR207111(GSM721073)
Whole cell RNA. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR029126(GSM416755)
143B. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
.......................................................................................................................................................GCTCCTCCCCTGCCTGTT...................................................... 181.000.00---------------------------------------------------------------------------------1.00-------------------------------------
...................................................................................................................................................................................................TGCCCTCGTGCCCCCCAT.......... 181.000.00------------------------------------------1.00----------------------------------------------------------------------------
..CCACCCCGGCCCCCCCG............................................................................................................................................................................................................ 171.000.00-------------------------------------------1.00---------------------------------------------------------------------------
............................GATCGCCGGCCAGA..................................................................................................................................................................................... 1421.001.00-----------------------------------------------------------------1.00-----------------------------------------------------
............................................................................................................................................................................................GCCTCTCTGCCCTCGTGCCCCCCAGTGGAGA.... 3111.001.00---------------------------------1.00-------------------------------------------------------------------------------------
.................................................................................CGGCCAGGCCCCTCCCCTGATC........................................................................................................................ 221.000.00----------1.00------------------------------------------------------------------------------------------------------------
..........GCCCCCCAGCCCCACGTCAC................................................................................................................................................................................................. 201.000.00---------------------------------------------------------------------------1.00-------------------------------------------
..CCACCCCGGCCCCCCAAG........................................................................................................................................................................................................... 181.000.00------------------1.00----------------------------------------------------------------------------------------------------
.....CCCCGGCCCCCCAGCCCCACA..................................................................................................................................................................................................... 211.000.00------------------1.00----------------------------------------------------------------------------------------------------
........................................................................................GCCCCTCCCCTGCCATG...................................................................................................................... 1760.170.17-------------------------------------0.17---------------------------------------------------------------------------------
................................................................................................................................AGCTCTGTCCTGTCTC............................................................................... 1680.120.12-----------------0.12-----------------------------------------------------------------------------------------------------
...............................................................................................................GGGCCTGGGGTTGGGGG............................................................................................... 17100.100.10--------------------------------0.10--------------------------------------------------------------------------------------