ID: hsa-mir-6748
GENE: TMEM179B(3)
chr11:62557102-62557407+


(2)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(1)
AGO2.ip 		(1)
AGO3.ip 		(7)
B-CELL 		(6)
BRAIN 		(8)
BREAST 		(39)
CELL-LINE 		(5)
CERVIX 		(4)
HEART 		(5)
HELA 		(7)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(29)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
CACCCCCTGGAACTGCTCTGCAGTTTTACTCCAACCTACACAATGCTGAAGTGAGACCCAAGGATAGGAGGAAAAACTGACATAAATATCTGTAGCTGTGTGGGTGCTCACCAGTGTATTGTGAGCTTGGCCTACCAGTGAGAGGAGCTGAAGGGGTTGTCAGCTTAAAATTCAGCAGTTCAGAGTGGTGTGTGGGTGGGAAGGACTGGATTTGAAATGGTCCCACTCCTGACGATCCTGTCCCTGTCTCCTACAGACCTCTTCTTGGGTGAATTTGGTATTGTGGTGTGTGGTCTTGGTGCTCCA
..............................................................................................................................................................................................((((((.(((..((((.(((((......((.......))....))))).))))...)))))))))...................................................
.........................................................................................................................................................................................186...................................................................256................................................
SizePerfect hitTotal NormPerfect NormSRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189782SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR189784SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		GSM416733(GSM416733)
HEK293. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037931(GSM510469)
293GFP. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038863(GSM458546)
MM603. (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037936(GSM510474)
293cand1. (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR189786SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR040015(GSM532900)
G623T. (cervix)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)		TAX577580(Rovira)
total RNA. (breast)		GSM532874(GSM532874)
G699T. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR040018(GSM532903)
G701N. (cervix)		SRR189783SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR040034(GSM532919)
G001N. (cervix)		SRR037938(GSM510476)
293Red. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR038854(GSM458537)
MM653. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR029124(GSM416753)
HeLa. (hela)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
...........................................................................................................................................................................................................................................................................................TGGTGTGTGGTCTTGGTGTTTG.2243.000.0021.00-11.007.00----------4.00------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................TCCTGTCCCTGTCTCCTACAGT.................................................22137.0010.00-15.00--1.00-----1.00----------1.001.00---1.00--1.001.00-1.00---1.00--1.00------1.00----2.00-2.00--1.00----------------1.00--1.00----------1.001.00--------------1.00--1.00----------
...........................................................................................................................................................................................................................................................................................TGGTGTGTGGTCTTGGTGTTT..2119.000.008.00-8.003.00-----------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TGTGGGTGGGAAGGACTGGATT..............................................................................................22117.0017.00----1.00-1.001.00--------3.001.00-1.00--1.00--------1.00-----1.00---------------------1.00--1.00---------------1.00-----1.00-------------------1.00---1.00--------
..............................................................................................................................................................................................TGTGGGTGGGAAGGACTGGAT...............................................................................................21116.0016.00----5.00--2.00-----------1.00---------------------1.00----------1.00--------1.00------1.00---1.00--1.00---1.00-----1.00-------------------------------
...........................................................................................................................................................................................................................................TCCTGTCCCTGTCTCCTACAG..................................................21110.0010.00-6.00--------3.00-----------1.00----------------------------------------------------------------------------------------------
............................................................................................................................................................................................TGTGTGGGTGGGAAGGACTGGA................................................................................................22110.0010.00-----------4.00------------1.001.00---------------1.00-------------1.00--------------------------------------------1.00---------1.00------
.............................................................................................................................................................................................GTGTGGGTGGGAAGGACTGG.................................................................................................2018.008.00----2.00----5.00--------------------------------------------------1.00--------------------------------------------------------
............................................................................................................................................................................................TGTGTGGGTGGGAAGGACTGG.................................................................................................2117.007.00-----4.001.00----------------------------------------1.00-------------------------------------------------------------1.00-------
...........................................................................................................................................................................................................................................................................................TGGTGTGTGGTCTTGGTGTT...205.000.002.00-2.001.00-----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................GTGTGGGTGGGAAGGACTGGA................................................................................................2115.005.00----2.00----------------------------2.00---1.00-------------------------------------------------------------------------------
............................................................................................................................................................................................TGTGTGGGTGGGAAGGACTGGATT..............................................................................................2415.005.00-----3.00------------------------------------------2.00--------------------------------------------------------------------
..............................................................................................................................................................................................TGTGGGTGGGAAGGACTGG.................................................................................................1914.004.00------------------3.00----------------------------------------------------------------------1.00---------------------------
......................................................................................................................................CCAGTGAGAGGAGCTGAAGGGGT.....................................................................................................................................................2314.004.00---------------------2.00----2.00------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TGTGGGTGGGAAGGACTGGAAA..............................................................................................2213.003.00-----3.00---------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................TGGTGTGTGGTCTTGGGGTT...203.000.00---3.00-----------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TGTGGGTGGGAAGGACTGGA................................................................................................2013.003.00------------------------------------------2.00---------------------------------------1.00----------------------------------
...........................................................................................................................................................................................................................................TCCTGTCCCTGTCTCCTACAGC.................................................2213.0010.00-----------------------------1.00--------------------------------------------1.00------------------------------1.00-----------
..........................................................................................................................................................................................................................GGTCCCACTCCTGACACCA.....................................................................193.000.00-----------------------2.00-------------------------------------------------------------------------1.00-------------------
.......................................................................................................................................................................................................................................................................................ATTGTGGTGTGTGGTCTTGGT......2113.003.00--------------------3.00------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................GTGTGGGTGGGAAGGACTGGAT...............................................................................................2213.003.00-----------------1.00-----------------------------------------------------------------------------------1.00------------1.00--
..............................................................................................................................................................................................TGTGGGTGGGAAGGACTGGATTAA............................................................................................2412.0017.00-------------------------------------------------2.00-------------------------------------------------------------------
...........................................................................................................................................................................................................................................TCCTGTCCCTGTCTCCTACA...................................................2012.002.00-1.00---------------------------------------------------------------------------------------------------------------1.00---
..............................................................................................................................................................................................TGTGGGTGGGAAGGACTGGATTTAA...........................................................................................252.000.00--------------------------------------------2.00------------------------------------------------------------------------
...........................................................................................................................................................................................................................................TCCTGTCCCTGTCTCCTAC....................................................1912.002.00-1.00---------------------------------------------------------------------1.00---------------------------------------------
...........................................................................................................................................................................................................................................TCCTGTCCCTGTCTCCTACAGA.................................................2212.002.00---------------------------1.00----------------------------------------------------------------1.00------------------------
...........................................................................................................................................................................................................................................................................................TGGTGTGTGGTCTTGGTGT....192.000.001.00-1.00------------------------------------------------------------------------------------------------------------------
...CCCCTGGAACTGCTCTGC.............................................................................................................................................................................................................................................................................................1812.002.00-------------------------1.00-----------------------------------------------------------------1.00-------------------------
..............................................................................................................................................................................................TGTGGGTGGGAAGGACTGGATAAA............................................................................................2412.0016.00---------------------------------------------------------1.00--------------------------------------------1.00--------------
.......................TTTTACTCCAACCTACACAATGCTGAAA...............................................................................................................................................................................................................................................................282.000.00-2.00-------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................GGGTGAATTTGGTATTGTTGT...................211.000.00--------------------------------------------------------------------------------1.00------------------------------------
.........................................................................................................................................GTGAGAGGAGCTGAAGGTACT....................................................................................................................................................211.000.00----------------------------1.00----------------------------------------------------------------------------------------
............................................................................................................................................................................................TGTGTGGGTGGGAAGGACTGGAA...............................................................................................2311.0010.00-------1.00-------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................GTGTGTGGTCTTGGTGCTCC.2011.001.00------------------------------------1.00--------------------------------------------------------------------------------
.............................................................................................................................................................................................GTGTGGGTGGGAAGGACTGGAAAT.............................................................................................2411.005.00-----------------------------------------------------------------------------------1.00---------------------------------
..............................................................................................................................................................................................TGTGGGTGGGAAGGACTGGAA...............................................................................................2111.003.00----1.00----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................GTGGGAAGGACTGGATTTGAAATGG......................................................................................2511.001.00------1.00--------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................GGAAGGACTGGATTTGAAATGG......................................................................................2211.001.00--------------------------------------------------------------------------------------------------1.00------------------
..........................................................................................................................................................................................................................GGTCCCACTCCTGACACTA.....................................................................191.000.00-----------------------1.00---------------------------------------------------------------------------------------------
........................................CAATGCTGAAGTGAGACCC.......................................................................................................................................................................................................................................................1911.001.00--------1.00------------------------------------------------------------------------------------------------------------
..........AACTGCTCTGCAGTTTTACTCCAACCTACA..........................................................................................................................................................................................................................................................................3011.001.00---------------1.00-----------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................TGGTCCCACTCCTGACACCA.....................................................................201.000.00----------------------------------1.00----------------------------------------------------------------------------------
.ACCCCCTGGAACTGCTGTC..............................................................................................................................................................................................................................................................................................191.000.00------------------------------------------------------------------------------------------------1.00--------------------
............................................................................................................................................................................................................................................................................GTGAATTTGGTATTGTG.....................1711.001.00---------------1.00-----------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TGTGGGTGGGAAGGACTGGATA..............................................................................................2211.0016.00----------------------------------------------------------1.00----------------------------------------------------------
...................................................................GAGGAAAAACTGACAGATT............................................................................................................................................................................................................................191.000.00---------------------------------------------------------------------------------1.00-----------------------------------
..............................................................................................................................................................................................TGTGGGTGGGAAGGACTGGAAG..............................................................................................2211.003.00-------------------------------1.00-------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................TTCTTGGGTGAATTTGGTATT........................2111.001.00---------------------------------------------------------------1.00-----------------------------------------------------
......................................................................................................................................................................................................................................GACGATCCTGTCCCTGTCTCCTACAGAC................................................2811.001.00-------------1.00-------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................ATTGTGGTGTGTGGTCTTGG.......2011.001.001.00--------------------------------------------------------------------------------------------------------------------
........................................................................................................................................AGTGAGAGGAGCTGAAGGG.......................................................................................................................................................1911.001.001.00--------------------------------------------------------------------------------------------------------------------
............................CTCCAACCTACACAATCGCG..................................................................................................................................................................................................................................................................201.000.00-1.00-------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................GTGTGGGTGGGAAGGACTGGAGA..............................................................................................2311.005.00-------------------------------------------------------------------1.00-------------------------------------------------
....................................................................................................................................................................................CAGAGTGGTGTGTGGTGTC...........................................................................................................191.000.00--------------------------------------------------------------------------------------1.00------------------------------
.............................................................................................................................................................................................................................................................................TGAATTTGGTATTGTGGT...................1811.001.00----------------------------------------------------------------------------------------------------------------1.00----
..................................................................GGAGGAAAAACTGACCCC..............................................................................................................................................................................................................................181.000.00--------1.00------------------------------------------------------------------------------------------------------------
.........................................................................................CTGTAGCTGTGTGGGTGCTCACC..................................................................................................................................................................................................2311.001.00------------1.00--------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................AAGGACTGGATTTGAAATGGTA....................................................................................221.000.00-----------------------------------------------1.00---------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................GGTGAATTTGGTATTGTGGGGT.................221.000.00------------1.00--------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................ATGGTCCCACTCCTGACGA.......................................................................1911.001.00----------------------------------------------------1.00----------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................TGGTGTGTGGTCTTGGTGTTTA.221.000.001.00--------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................GTGAATTTGGTATTGTGGT...................1911.001.00---------------1.00-----------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GTCCCACTCCTGACGCCT.....................................................................181.000.00-----------------------------------------------------------------------------------------------------------1.00---------
......................................................................................................................................................................................................................................................................TCTTGGGTGAATTTGGTATT........................2011.001.00--------1.00------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TGTGGGTGGGAAGGACTGGATATT............................................................................................2411.0016.00---------------------------------------------------------------------------------------------------------------1.00-----
...........................................................................................................................................GAGAGGAGCTGAAGGAAGT....................................................................................................................................................191.000.00----------------------------------------------------------------1.00----------------------------------------------------
.................................................................AGGAGGAAAAACTGATGT...............................................................................................................................................................................................................................181.000.00---------------------------1.00-----------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................TCCTGTCCCTGTCTCCTACAGTT................................................2311.0010.00-----------------------------------------------------------------------------------------------1.00---------------------
........................TTTACTCCAACCTACACAATGCT...................................................................................................................................................................................................................................................................2311.001.00--------1.00------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TGTGGTGTGTGGTCTTGGTG.....2011.001.00------------1.00--------------------------------------------------------------------------------------------------------
.........................................................................................CTGTAGCTGTGTGGGT.........................................................................................................................................................................................................1630.330.33------------------------------------------------------0.33--------------------------------------------------------------
..................................................................................................................TGTATTGTGAGCTTG.................................................................................................................................................................................1570.140.14--------------------------------------------------------------------------------------------------------------------0.14

Antisense strand
CACCCCCTGGAACTGCTCTGCAGTTTTACTCCAACCTACACAATGCTGAAGTGAGACCCAAGGATAGGAGGAAAAACTGACATAAATATCTGTAGCTGTGTGGGTGCTCACCAGTGTATTGTGAGCTTGGCCTACCAGTGAGAGGAGCTGAAGGGGTTGTCAGCTTAAAATTCAGCAGTTCAGAGTGGTGTGTGGGTGGGAAGGACTGGATTTGAAATGGTCCCACTCCTGACGATCCTGTCCCTGTCTCCTACAGACCTCTTCTTGGGTGAATTTGGTATTGTGGTGTGTGGTCTTGGTGCTCCA
..............................................................................................................................................................................................((((((.(((..((((.(((((......((.......))....))))).))))...)))))))))...................................................
.........................................................................................................................................................................................186...................................................................256................................................
SizePerfect hitTotal NormPerfect NormSRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189782SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR189784SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		GSM416733(GSM416733)
HEK293. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037931(GSM510469)
293GFP. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038863(GSM458546)
MM603. (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037936(GSM510474)
293cand1. (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR189786SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR040015(GSM532900)
G623T. (cervix)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)		TAX577580(Rovira)
total RNA. (breast)		GSM532874(GSM532874)
G699T. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR040018(GSM532903)
G701N. (cervix)		SRR189783SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR040034(GSM532919)
G001N. (cervix)		SRR037938(GSM510476)
293Red. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR038854(GSM458537)
MM653. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR029124(GSM416753)
HeLa. (hela)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
...............................................................................................................................................................................................................................CACTCCTGACGATCCTGT................................................................. 1812.002.00-------------2.00-------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................GTCCCTGTCTCCTACAGACCTCTTCTTGG...................................... 2912.002.00-----------------------------------2.00---------------------------------------------------------------------------------
................................................................................................................................................................................AGTTCAGAGTGGTGTGTCTG.............................................................................................................. 201.000.00-------------------------1.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................................GTTCAGAGTGGTGTGGC................................................................................................................ 171.000.00------------------------------------------------------------------------------------------1.00--------------------------
........................................................................................................................GTGAGCTTGGCCTACCAGTGAGAGGTT............................................................................................................................................................... 271.000.00--------------------------------1.00------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................ATCCTGTCCCTGTCTCCTACA................................................... 2111.001.00------------------------1.00--------------------------------------------------------------------------------------------
......................................................................................................................................................................AAAATTCAGCAGTTCCTG.......................................................................................................................... 181.000.00-------------------------------------------------------------------------------------------------------------------1.00-
............................................................................................................................................................................................................................................CCTGTCCCTGTCTCCTACAGACCTCTTCTTGGG..................................... 3311.001.00---------------------------------------------1.00-----------------------------------------------------------------------
......................................................................GAAAAACTGACATAAACAG......................................................................................................................................................................................................................... 191.000.00----------1.00----------------------------------------------------------------------------------------------------------
.........................................................................................CTGTAGCTGTGTGGGCTAA...................................................................................................................................................................................................... 191.000.00-----------------------------------------------------------------1.00---------------------------------------------------
.......................................................................................................................................................................................................................................................CTCCTACAGACCTCTTCTTGGGTGAA................................. 2611.001.00--------------------------------------1.00------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................ATCCTGTCCCTGTCTCCTACAGACC............................................... 2511.001.00----------------------------------------------------------------------------------------------1.00----------------------
...............................................................................................................................................................................................................................................GTCCCTGTCTCCTACAGACCTCTTCTT........................................ 2711.001.00----------------------------------1.00----------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................CCCTGTCTCCTACAGACCTCTTCTTGGGT.................................... 2911.001.00------------1.00--------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................CCTACAGACCTCTTCTTGGGT.................................... 2111.001.00----------------------------1.00----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................GTCCCTGTCTCCTACAGAC................................................ 1911.001.00------------------------------------------------------1.00--------------------------------------------------------------
.................................................................................................................................................................................................................................................CCCTGTCTCCTACAGATCA.............................................. 191.000.00-------------------1.00-------------------------------------------------------------------------------------------------
..........................................................................................................................................................GGTTGTCAGCTTAAAATTCA.................................................................................................................................... 2011.001.00--------------------------------------------------1.00------------------------------------------------------------------
.........GAACTGCTCTGCAGTTTTACTCCAACCT............................................................................................................................................................................................................................................................................. 2811.001.00------------------------------1.00--------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................CCTGTCCCTGTCTCCTACAGAC................................................ 2211.001.00------1.00--------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................CCCTGTCTCCTACAGACCTCTTCTTGGGTGAAT................................ 3311.001.00--------------------------------------------------1.00------------------------------------------------------------------
..........................................................................................................................................................................................................................GGTCCCACTCCTGACGATCCTGTCCCT............................................................. 2711.001.00-----------------------------------------------------------------------------1.00---------------------------------------
..................................CCTACACAATGCTGAAG............................................................................................................................................................................................................................................................... 1711.001.00------------------------1.00--------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................CACTCCTGACGATCCTGTCTC.............................................................. 211.000.00-------------1.00-------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................CTCCTACAGACCTCTTCTTGGG..................................... 2211.001.00-----------------1.00---------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................CGATCCTGTCCCTGTCAC........................................................ 181.000.00---------------------------------------------------------------------------------------------------1.00-----------------
...........................................................................................................................................................................................................................................TCCTGTCCCTGTCTCCTACAGACCTC............................................. 261.000.00----------------------------------------1.00----------------------------------------------------------------------------
....................................................................................................................................................................................................................................................TGTCTCCTACAGACCTCTTCTTGGG..................................... 2511.001.00------------------------------------------------------------------1.00--------------------------------------------------
...................................................................................................................................................................................................................................CCTGACGATCCTGTCCCGG............................................................ 191.000.00--------1.00------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................TCTCCTACAGACCTCTTCTTGGGTGA.................................. 2611.001.00--------------------------------------1.00------------------------------------------------------------------------------
................................................................................................................................................................................................................................................TCCCTGTCTCCTACAGACCTC............................................. 2111.001.00---------------------------------------------1.00-----------------------------------------------------------------------
...................GCAGTTTTACTCCAACCTA............................................................................................................................................................................................................................................................................ 1911.001.00---------------------------------------------------------------------------------------------1.00-----------------------
...................................................................................................................................................................................................................................................................................TGGTATTGTGGTGTGTG.............. 171.000.00---------------------------------------------------------------------1.00-----------------------------------------------
...CCCCTGGAACTGCTCTCTGG........................................................................................................................................................................................................................................................................................... 201.000.00----------------------------------------1.00----------------------------------------------------------------------------
......................................................................................................................................................................................................................................................TCTCCTACAGACCTCTTCTA........................................ 201.000.00-------------------------------------------1.00-------------------------------------------------------------------------
................................................................................................................................................................................AGTTCAGAGTGGTGTGCTG............................................................................................................... 191.000.00------1.00--------------------------------------------------------------------------------------------------------------
..................................CCTACACAATGCTGAAGC.............................................................................................................................................................................................................................................................. 181.000.00-------------------------------------------1.00-------------------------------------------------------------------------
............................................................................................................................................................................................................................TCCCACTCCTGACGATCCTGTCCCTGT........................................................... 2711.001.00-------1.00-------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................TGTCCCTGTCTCCTAC.................................................... 1650.400.40------0.40--------------------------------------------------------------------------------------------------------------