ID: hsa-mir-6746
GENE: FADS3(6)
chr11:61645638-61646033-


(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(1)
AGO3.ip 		(9)
B-CELL 		(7)
BRAIN 		(16)
BREAST 		(33)
CELL-LINE 		(7)
CERVIX 		(4)
FIBROBLAST 		(7)
HEART 		(3)
HELA 		(7)
LIVER 		(3)
OTHER 		(2)
RRP40.ip 		(20)
SKIN 		(3)
UTERUS

Sense strand
CAGACGTGACGGTGGCGCCCGTCTTCCTCCTGGGGGAGTCATCCGTCGAGGTGGGTGGGGAGGGACGTGGACAACCTCTGGCTGGGCCTGCAGCTGAGGGGGAGCTAATGCACTGGGTCCCCACTCTGCCCCTGACCTAGCCCCTGATCTGGCCTCCACTCTGGCTGGGCCAAGCTCTGCCCCCGTGTCTTTCCTTCCCACCTCCCAACCTGCTGGGGACGACCAGCCCGCTTGCTAGAATCTAGAGTTGCCTTTGACCCTTGGCCCCAGCCAGCCCCGTGACCTTGCCCGGGAGAAGGAGGTGGCCTGGAGAGCTGCTGTCTCCAGCCGCCGCCTGTCTCCACAGTATGGCAAGAAGAAACGCAGATACCTACCCTACAACCAGCAGCACCTGTA
...................................................................................................................................................................................................................................................................................................((((((((.(((((.(((((((.......)))))))))))).))).)))))......................................................
...........................................................................................................................................................................................................................................................................................284...........................................................346................................................
SizePerfect hitTotal NormPerfect NormSRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR038854(GSM458537)
MM653. (cell line)		SRR189782SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040014(GSM532899)
G623N. (cervix)		SRR189786SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR040029(GSM532914)
G026T. (cervix)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189784SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR038859(GSM458542)
MM386. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532880(GSM532880)
G659T. (cervix)		SRR343335TAX577745(Rovira)
total RNA. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577589(Rovira)
total RNA. (breast)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		TAX577588(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189787SRR040030(GSM532915)
G013N. (cervix)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR029126(GSM416755)
143B. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029131(GSM416760)
MCF7. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040018(GSM532903)
G701N. (cervix)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR343336SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
....................................................................................................................................................................................................................................................................................................................................CAGCCGCCGCCTGTCTCCACAGT.................................................23117.0017.00-----5.00---------------2.001.00------------2.00--1.00------------------------------------1.00---------------1.00-1.00---------1.00----1.00-1.00--------------
....................................................................................................................................................................................................................................................................................................................................CAGCCGCCGCCTGTCTCCACAGA.................................................23115.0010.007.00------------------------1.00------2.00--------------------------------------1.00-----------------1.00-------------------1.00-------1.001.00------
....................................................................................................................................................................................................................................................................................................................................CAGCCGCCGCCTGTCTCCACA...................................................21114.0014.00-1.00--1.00----1.00-------1.00---------------1.00----1.00---1.00---1.00-----------------1.00------------------1.00-1.00-------------------------1.00--1.00-1.00--------
....................................................................................................................................................................................................................................................................................................................................CAGCCGCCGCCTGTCTCCACAG..................................................22110.0010.00-2.001.00-----2.00-----1.00---------------------------1.00--------------------------------------------1.00--------1.00---------------1.00------------
................................................................................................................................................................................................................................................................................................CCGGGAGAAGGAGGTGGCCTGG......................................................................................22110.0010.00----2.00----1.001.00------------2.00--------------------1.00----------------------1.00----------1.001.00---------------------------------------------
................................................................................................................................................................................................................................................................................................CCGGGAGAAGGAGGTGGCCTGGA.....................................................................................2316.006.00-2.00-------1.00----------------------------------------1.00-----------1.00----------1.00---------------------------------------------------
...............................................................................................................................................................................................................................................................................................CCCGGGAGAAGGAGGTGGCCTGGA.....................................................................................2415.005.00------1.00---------1.00--1.00--------------1.00----------------------------------1.00-------------------------------------------------------
...............................................................................................................................................................................................................................................................................................CCCGGGAGAAGGAGGTGGCCT........................................................................................2115.005.00----------1.002.00------------------------------------------------------------------------1.00--------------1.00-------------------------
....................................................................................................................................................................................................................................................................................................................................CAGCCGCCGCCTGTCTCCAC....................................................2015.005.00----2.00---------1.00-------------------------------------1.00-----------------------------------------------1.00------------------------
....................................................................................................................................................................................................................................................................................................................................CAGCCGCCGCCTGTCTCCACT...................................................2114.005.00-1.00--------------------------------------1.00--------------------------------------------------------1.00-------1.00-------------------
................................................................................................................................................................................................................................................................................................CCGGGAGAAGGAGGTGGCCT........................................................................................2014.004.00-------1.00----------------------2.00-------------------------------------------------------------------------1.00--------------------
..................................................................................................................................................................................................................................................................................................GGGAGAAGGAGGTGGCCTGGAA....................................................................................2213.003.00---------------------------1.00---1.00------------------------------------1.00--------------------------------------------------------
..................................................................................................................................................................................................................................................................................................GGGAGAAGGAGGTGGCCTGGAGT...................................................................................2313.003.00------------1.00----------------1.00---------------------------1.00-------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................GGGAGAAGGAGGTGGCCTGGAG....................................................................................2213.003.00--------------------2.00------------1.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................CCGGGAGAAGGAGGTGGCCTGGAT....................................................................................2413.006.00---------------------------------------1.00-1.00------------------------------------------------1.00----------------------------------
..................................................................................................................................................................................................................................................................................................GGGAGAAGGAGGTGGCCTGGAAA...................................................................................2313.003.00--1.00--------1.00----------------1.00------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................GGGAGAAGGAGGTGGCCTGGA.....................................................................................2113.003.00-------------2.00--------------------------------------------------------------------------------1.00------------------------------
................................................................................................................................................................................................................................................................................................CCGGGAGAAGGAGGTGGCC.........................................................................................1913.003.00-------------------------1.00----------------------1.00----------------------------------------------------1.00-----------------------
..................................................................................................................................................................................................................................................................................................GGGAGAAGGAGGTGGCCTGGAGA...................................................................................2313.003.00-------------------------------------------2.00-------------------------------------1.00-------------------------------------------
................................................................................................................................................................................................................................................................................................CCGGGAGAAGGAGGTGGCCTGGAA....................................................................................2413.006.00---------------1.00--------2.00----------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................CCGGGAGAAGGAGGTGGCCTGGAAC...................................................................................2512.006.00------------------------------------2.00----------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................CCGGGAGAAGGAGGTGGCCTGGAAT...................................................................................2512.006.00------------------------------------------------------1.00-1.00--------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................CGGGAGAAGGAGGTGGCCTGGAA....................................................................................2312.001.00--2.00--------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GATACCTACCCTACAACCAGCAGCACC....2712.002.00-------2.00---------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................CGGGAGAAGGAGGTGGCCTGGAT....................................................................................2312.001.00---------------------------------------------------1.00------------------------------1.00------------------------------------------
....................................................................................................................................................................................................................................................................................................................................CAGCCGCCGCCTGTCTCCA.....................................................1912.002.00-------------------------------------------------------------1.00------------1.00--------------------------------------------------
.................................................................................................................................................................................................................................................................................................CGGGAGAAGGAGGTGGCCT........................................................................................1912.002.00---------------------------1.00-1.00-----------------------------------------------------------------------------------------------
..GACGTGACGGTGGCGCCCG.......................................................................................................................................................................................................................................................................................................................................................................................1912.002.00------2.00----------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................CCGGGAGAAGGAGGTGGCCTGGAAA...................................................................................2512.006.00----------------------1.00-----------1.00------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................ACGCAGATACCTACCCCGGT................201.000.00--------------------------------------------------------------------------------------------------1.00--------------------------
..............................................................................................................................................................................................................................................................................................GCCCGGGAGAAGGAGGTGGCCCGG......................................................................................241.000.00--------------------------1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................CAGCCGCCGCCTGTCTCCACAGAT................................................2411.0010.00----------------------------------------------------------------------------------------------------------1.00------------------
...................................................................................................................................................................................................................................................................................................................................................................AAGAAACGCAGATACCTACCCTACAACCAGCAG........3311.001.00-----------------------------------------------------------------------------------------------1.00-----------------------------
........................................................................................................................................................................................................................................................................................................AGGAGGTGGCCTGGAGAGCT................................................................................2011.001.00---------------------------------------------1.00-------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................CAGCCGCCGCCTGTCTCCACAGTAA...............................................251.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................CCGGGAGAAGGAGGTGGCCTGA......................................................................................2211.001.00-----------------------------------------------------------------------------------------------------------1.00-----------------
................................................................................................................................................................................................................................................................................................CCGGGAGAAGGAGGTGGCCTGGCA....................................................................................2411.0010.00---------------------------------------1.00-------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GATACCTACCCTACAACCAGCAGCATC....271.000.00-------1.00---------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................TCCAGCCGCCGCCTGTGTG.......................................................191.000.00----------------------------------------------------------------------------------------1.00------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................GTATGGCAAGAAGAAACG.................................1811.001.00------1.00----------------------------------------------------------------------------------------------------------------------
..................................................GTGGGTGGGGAGGGACGTGGA.....................................................................................................................................................................................................................................................................................................................................2111.001.00--1.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................AGAAGGAGGTGGCCTGGAGT...................................................................................201.000.00------------------1.00----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................AGCCGCCGCCTGTCTCCAT....................................................191.000.00---------------1.00-------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................CGGGAGAAGGAGGTGGCCTGGA.....................................................................................2211.001.00----------------------------------------1.00------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................AACCAGCAGCACCTGTAGGA201.000.00------------------------------------------------------------------------------------------------------1.00----------------------
...............................................................................................................................................................................................................................................................................................CCCGGGAGAAGGAGGTGGCCTGG......................................................................................2311.001.00-----------------------------------------------------1.00-----------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................CGGGAGAAGGAGGTGGCCTG.......................................................................................2011.001.00-----------------------------------------1.00-----------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................CCGGGAGAAGGAGGTGGCCTGGC.....................................................................................2311.0010.00-------------------------------------------------------------------------------------------------------------------1.00---------
..................................................................................................................................................................................................................................................................................................................................TCCAGCCGCCGCCTGTAAGA......................................................201.000.00--------1.00--------------------------------------------------------------------------------------------------------------------
...........................................CGTCGAGGTGGGTGGTGA...............................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------1.00---------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................GGGAGAAGGAGGTGGCCTGGAGTA..................................................................................2411.003.00-------------------------------------------------------1.00---------------------------------------------------------------------
.............................................................................................................................................................................................TTTCCTTCCCACCTCACAG............................................................................................................................................................................................191.000.00-----------------------------------------------1.00-----------------------------------------------------------------------------
....CGTGACGGTGGCGCCCGTCTTCCTCCTGGGGGAGT.....................................................................................................................................................................................................................................................................................................................................................................3511.001.00----------------1.00------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................AGCCGCCGCCTGTCTCCACAGTT................................................231.000.00----------------------------------------------------------------------------1.00------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................TCCAGCCGCCGCCTGTCTCCATT...................................................231.000.00-----------------1.00-----------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................AGAGTTGCCTTTGACCCT.......................................................................................................................................1811.001.00-----------------------------------------------------------------1.00-----------------------------------------------------------
................................................................................................................................................................................................................................................................................................CCGGGAGAAGGAGGTGGCCTATT.....................................................................................2311.004.00--------------------------------------------1.00--------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................GGGAGAAGGAGGTGGCCTGAAAA...................................................................................231.000.00----------------------------1.00------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................CAGCCGCCGCCTGTCTCCACCGT.................................................2311.005.00------------------------------------------------------------------------1.00----------------------------------------------------
....................................................................................................................................................................................CCCCGTGTCTTTCCTTGGCG....................................................................................................................................................................................................201.000.00--------------------------------------------------------------------------------1.00--------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................TATGGCAAGAAGAAACGCAG..............................2011.001.00---------------------------------------------1.00-------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................GGGAGAAGGAGGTGGCCTGGTG....................................................................................221.000.00----------1.00------------------------------------------------------------------------------------------------------------------
..............................................................................TGGCTGGGCCTGCAGCTGAGGGGGA.....................................................................................................................................................................................................................................................................................................2511.001.00-------------------1.00---------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................CAGCCGCCGCCTGTCTCCACTA..................................................2211.005.00----1.00------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................CAGCCGCCGCCTGTCTCCACAGTC................................................2411.0017.00------------1.00----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................CCAGCCGCCGCCTGTCTCCACA...................................................2211.001.00----------------1.00------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................CCAACCTGCTGGGGATGC..............................................................................................................................................................................181.000.00----------------------------------------------1.00------------------------------------------------------------------------------
......................CTTCCTCCTGGGGGAGTC....................................................................................................................................................................................................................................................................................................................................................................1811.001.00---------------------------------------------------------------1.00-------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................CGGGAGAAGGAGGTGGCCTGGAG....................................................................................2311.001.00-----------------------------------------------------------1.00-----------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................CCCGGGAGAAGGAGGTGGCCTG.......................................................................................2211.001.00------------1.00----------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................CAGCCGCCGCCTGTCTCCACAT..................................................2211.0014.00---------------1.00-------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................CAGCCGCCGCCTGTCTCCAGA...................................................2111.002.00-----------------------------------------------------------------------------------------------------------------1.00-----------
................................................................................................................................................................................................................................................................................................CCGGGAGAAGGAGGTGGCCTGGTTT...................................................................................2511.0010.00--1.00--------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................CCGGGAGAAGGAGGTGGCCTGGAAGA..................................................................................2611.006.00--------------------------------------------------------------------------------------1.00--------------------------------------
.....................................................................................................................................................................................................................................................................................................................................AGCCGCCGCCTGTCTCCACAAA.................................................221.000.00--------------1.00--------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................ACAACCAGCAGCACCTA..171.000.00------------------------------------------------------------------1.00----------------------------------------------------------
...............................................................................................................................................................................................................................................................................................CCCGGGAGAAGGAGGTGGCCTGAAT....................................................................................2511.001.00-------------------------------------------------1.00---------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................CCGGGAGAAGGAGGTGGCCTG.......................................................................................2111.001.00-------------------------------1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................TCCAGCCGCCGCCTGTCTCCACT...................................................231.000.00--------------------------------------------------------------------------------------------1.00--------------------------------
..................................................................................................................................................................................................................................................................................................GGGAGAAGGAGGTGGCCTGGATA...................................................................................2311.003.00-------------1.00---------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................CGGGAGAAGGAGGTGGCC.........................................................................................1820.500.500.50----------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................AAGGAGGTGGCCTGGAGAG..................................................................................1920.500.50-----------------------------------------------------------------------------------------------------------------------0.50-----
..............GCGCCCGTCTTCCT................................................................................................................................................................................................................................................................................................................................................................................1450.200.20-----------------0.20-----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................GGGAGAAGGAGGTGGCC.........................................................................................1760.170.17------------------------------------------------0.17----------------------------------------------------------------------------
.............................................................................................CTGAGGGGGAGCTA.................................................................................................................................................................................................................................................................................................1480.120.12--------------------------------------------------------------------------------------------------------------------------0.12--
......................................................................................CCTGCAGCTGAGGGGG......................................................................................................................................................................................................................................................................................................1680.120.12-------------------------------------------------------------------------------------------------------------------------0.12---
........................................................................................................................................................................................................................................................................................................................................CGCCGCCTGTCTC.......................................................1390.110.11----------------------------------------------------------------------------------------------------------------------------0.11

Antisense strand
CAGACGTGACGGTGGCGCCCGTCTTCCTCCTGGGGGAGTCATCCGTCGAGGTGGGTGGGGAGGGACGTGGACAACCTCTGGCTGGGCCTGCAGCTGAGGGGGAGCTAATGCACTGGGTCCCCACTCTGCCCCTGACCTAGCCCCTGATCTGGCCTCCACTCTGGCTGGGCCAAGCTCTGCCCCCGTGTCTTTCCTTCCCACCTCCCAACCTGCTGGGGACGACCAGCCCGCTTGCTAGAATCTAGAGTTGCCTTTGACCCTTGGCCCCAGCCAGCCCCGTGACCTTGCCCGGGAGAAGGAGGTGGCCTGGAGAGCTGCTGTCTCCAGCCGCCGCCTGTCTCCACAGTATGGCAAGAAGAAACGCAGATACCTACCCTACAACCAGCAGCACCTGTA
...................................................................................................................................................................................................................................................................................................((((((((.(((((.(((((((.......)))))))))))).))).)))))......................................................
...........................................................................................................................................................................................................................................................................................284...........................................................346................................................
SizePerfect hitTotal NormPerfect NormSRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR038854(GSM458537)
MM653. (cell line)		SRR189782SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040014(GSM532899)
G623N. (cervix)		SRR189786SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR040029(GSM532914)
G026T. (cervix)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189784SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR038859(GSM458542)
MM386. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532880(GSM532880)
G659T. (cervix)		SRR343335TAX577745(Rovira)
total RNA. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577589(Rovira)
total RNA. (breast)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		TAX577588(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189787SRR040030(GSM532915)
G013N. (cervix)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR029126(GSM416755)
143B. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029131(GSM416760)
MCF7. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040018(GSM532903)
G701N. (cervix)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR343336SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
.........................................................................................................................................................................................................................................................................CCCAGCCAGCCCCGTGAC................................................................................................................. 1816.006.00---5.00------------------------------------------------------------------1.00------------------------------------------------------
.................................................................................................................................................................................................CTTCCCACCTCCCAACAGC........................................................................................................................................................................................ 191.000.00-------------------------------------1.00---------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................GTGGCCTGGAGAGCTGCTTGA.......................................................................... 211.000.00--------------------------1.00--------------------------------------------------------------------------------------------------
...............................GGGGGAGTCATCCGTCGAGGTGGGTGGGGA............................................................................................................................................................................................................................................................................................................................................... 3011.001.00------------------------------------------------------------1.00----------------------------------------------------------------
..........................................................................................................................................................................................................................................................................CCAGCCAGCCCCGTGACT................................................................................................................ 181.000.00---1.00-------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................CCCAGCCAGCCCCGTGTGGG............................................................................................................... 201.000.00----------------------------------------------------------1.00------------------------------------------------------------------
.................................................................................................................................................................................................CTTCCCACCTCCCAACAC......................................................................................................................................................................................... 181.000.00------------------1.00----------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................CCAAGCTCTGCCCCCTGGC................................................................................................................................................................................................................ 191.000.00-----------------------------------------------------------------------------1.00-----------------------------------------------
.......................................................................................................................................................................................................................GGGACGACCAGCCC....................................................................................................................................................................... 1450.200.20-----------------------------------------------0.20-----------------------------------------------------------------------------
.....GTGACGGTGGCGCC......................................................................................................................................................................................................................................................................................................................................................................................... 1450.200.20------------------------------------------------------------------------------------------------------------------------0.20----
.................................................................................................................................................................................................................................................................................................................................CTCCAGCCGCCGCCTT........................................................... 160.120.00---------------------------------------------------------------------------------------------------------------------------0.12-
.................................................................................................................................................................................................................................................................................................................................CTCCAGCCGCCGCCT............................................................ 1580.120.12-------------------------------------------------0.12---------------------------------------------------------------------------