ID: hsa-mir-6741
GENE: PYCR2
chr1:226109730-226109953-


(2)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(4)
AGO2.ip 		(1)
AGO3.ip 		(17)
B-CELL 		(4)
BRAIN 		(21)
BREAST 		(46)
CELL-LINE 		(5)
CERVIX 		(3)
FIBROBLAST 		(5)
HEART 		(2)
HELA 		(1)
KIDNEY 		(4)
LIVER 		(4)
OTHER 		(30)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
ACATCGTGGTCTCCTGTGCGGCTGGTGTCACCATCAGCTCTGTGGAGAAGGTGCCCATCTCAGCCCTGATGCCCCTTGTGTGAGGGGAGGGTTGACCCACGAATGGCAGCTAATGGGTGGGTGCTGGTGGGAGCCGTGCCCTGGCCACTCATTCGGCTCTCTCCCTCACCCTAGAAGCTGATGGCATTCCAGCCAGCCCCCAAAGTGATTCGCTGCATGACCAA
..................................................................................................................(((((((....((.((((((((.((....))........)))))))).))))))))).....................................................
...............................................................................................................112...........................................................174................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189784SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR037935(GSM510473)
293cand3. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR015362(GSM380327)
Naïve B Cell (Naive138). (B cell)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR189787DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR189785SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR189783SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037938(GSM510476)
293Red. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		GSM339994(GSM339994)
hues6. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189786SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR029124(GSM416753)
HeLa. (hela)		TAX577743(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		GSM339996(GSM339996)
hues6Neuron. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343335SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR343334SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR040015(GSM532900)
G623T. (cervix)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR191530(GSM715640)
132genomic small RNA (size selected RNA from . (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR343336SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR191462(GSM715572)
1genomic small RNA (size selected RNA from to. (breast)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR040024(GSM532909)
G613N. (cervix)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR040011(GSM532896)
G529T. (cervix)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925AGO2Paz8(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTAG..................................................221147.00147.0033.0022.005.00-3.00-3.006.002.001.00--3.001.00-4.002.00-2.004.00-4.00----3.001.003.00--2.001.00-2.001.00---3.003.002.00-1.00-2.002.00----1.001.00-1.00--1.001.001.00-----2.001.001.00-----1.001.00-----1.001.001.00----1.001.00-----1.001.001.00---1.00---1.00-----1.00----1.00-----1.00------------1.00-----------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTG......................................................................................22133.0033.001.001.00-6.003.00--1.00--2.002.00-----1.00--4.00-1.001.005.00-----1.00------2.00----------------------------------------------------1.00------------------------------------------1.00------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTGT.....................................................................................23132.0033.00---7.004.00--3.00--6.00--------1.00-1.00---3.00---1.00--------1.00----------------------------------------1.00------1.00--------------------1.00----1.00---------------1.00-----------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTAGT.................................................23127.00147.00-5.00-2.00--------3.001.001.00------------1.001.00--------------------2.002.001.00----------1.00---------------------1.00------1.00-------------------1.00----1.00-------1.00------1.00--------1.00-----------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTAGA.................................................23126.0026.001.002.003.00---2.001.00------2.002.002.00-2.00--------------1.00----1.00------------------1.00-1.00--1.00--------------------1.00----------------------------------1.00-----------------1.00--1.00------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTGA.....................................................................................23123.0033.001.00-10.00-1.00-1.00-3.00-------1.00-----1.001.00-------------1.00--------------------------1.00--1.00-----------------------------------------------------------------------------1.00------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGT.......................................................................................21121.0021.001.00--1.003.00-2.00-3.00--2.00-----1.00-----------1.002.00-------1.00----------------------1.00---------1.00---------------------------------1.00------------------------------------1.00---------
...................................................................................................................GGTGGGTGCTGGTGGGAGCC.........................................................................................20115.0015.00-----15.00--------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTAT..................................................22111.002.005.00--------1.00-----------------------1.00----------------------------------------------------------1.00------1.00-----------------------------1.00--------1.00-------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCG........................................................................................20111.0011.001.002.00-1.00-------------2.00-------------------------------------2.00----------------1.00----------------------------------------------------------------1.00-----1.00--------
.........................................................................................................................................................CGGCTCTCTCCCTCACCCTAGA.................................................2219.009.00--7.00---1.00----------------------------1.00--------------------------------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCG........................................................................................2119.009.00-3.00-----------------------2.001.00---1.00------------1.00-------------------1.00----------------------------------------------------------------------------------------
.........................................................................................................................................................CGGCTCTCTCCCTCACCCTAGT.................................................2217.003.00---------------------------------------------------------------------1.00------1.001.00------------------------------1.00----------------1.00-1.00----1.00-------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCT....................................................2016.006.001.00------------3.00---------------------------------1.00-----------------------------------------------------------------1.00--------------------------------------
.....................................................................................................................TGGGTGCTGGTGGGAGCCGT.......................................................................................2015.005.00-----------1.00----------2.002.00--------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAAAAT........................................................................................204.000.00---4.00----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTGTTA...................................................................................2514.0033.00--------------4.00-----------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTGTT....................................................................................2414.0033.00-----------1.00------------------------------1.00----1.00-------------------------------------------------------1.00------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTAA..................................................2214.002.001.00-----------------------------------2.00-----------------------------------------1.00-------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGC..........................................................................................1914.004.00---3.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACC......................................................1814.004.00--4.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TGGGTGCTGGTGGGAGCCGTGC.....................................................................................2213.003.00-2.00--1.00---------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCCAG..................................................2213.002.00---------2.00-----------------1.00----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................CGGCTCTCTCCCTCACCCTAG..................................................2113.003.001.00--------1.00-------------------------------------------1.00--------------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGT.......................................................................................2213.003.00-----------------------------1.00-------------------------------1.00-------------------------------------------------------------------------------1.00----------
...........................................................................................................................................................GCTCTCTCCCTCACCCTAG..................................................1913.003.00--------3.00-----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGTGT.....................................................................................243.000.00--------------------------------------------------------------------------------------------------1.00---1.00--------------------------------1.00----------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTT......................................................................................2213.0021.00----------------1.001.00------------------------------------------------------------------------------------------------------1.00-------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGA.......................................................................................2112.0011.00--------------------------------------------1.00------------------1.00----------------------------------------------------------------------------------------
......................................................................................................................................................ATTCGGCTCTCTCCCG..........................................................162.000.00--------------------------------2.00-----------------------------------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGA..........................................................................................192.000.00----------------------1.001.00--------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTAC..................................................2212.002.00---------1.00-------------------------------------------------------------------------------1.00--------------------------------------------------------------
............................................................................................................................................................CTCTCTCCCTCACCCTAG..................................................1812.002.00---------------------------------1.00-----------------------------------------------------------------------------------------1.00----------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTAA.....................................................................................2312.0021.00-----------------------------1.00-----------------------1.00--------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCC.....................................................1912.002.00--2.00-----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTGC.....................................................................................2312.002.00------------------------------------------------------1.00-1.00-----------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTA...................................................2112.002.001.00---------------------------------------------------1.00---------------------------------------------------------------------------------------------------
......................................................................................................................GGGTGCTGGTGGGAGCCG........................................................................................1822.002.00--------------------------------------------------------------------1.50------------------------------------------------------------------------------0.50----
..ATCGTGGTCTCCTGTGCGGCTGG.......................................................................................................................................................................................................2312.002.00------------------------------------------------------------2.00-------------------------------------------------------------------------------------------
..............................................................................................................TAATGGGTGGGTGCTGGTGGGAGCCGTTT.....................................................................................291.000.00---------1.00----------------------------------------------------------------------------------------------------------------------------------------------
.......GGTCTCCTGTGCGGCGTTG......................................................................................................................................................................................................191.000.00------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
..........................................................................................................................................................GGCTCTCTCCCTCACCCTAGTT................................................221.000.00-----------------------------------1.00--------------------------------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGTAT.....................................................................................2411.003.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AATGGGTGGGTGCTGGTGGGAGC..........................................................................................2311.001.00------------------------------------------------------------------------------------------------------------------1.00-------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCCAGT.................................................2311.002.00--------------------------------------------------------1.00-----------------------------------------------------------------------------------------------
..................................................................................................................GGGTGGGTGCTGGTGGGGGGT.........................................................................................211.000.00------------------------------------------------------------------------------------------------------------------------------------------------1.00-------
...................................................................................................................GGTGGGTGCTGGTGGGAGAAAA.......................................................................................221.000.00-----------------1.00--------------------------------------------------------------------------------------------------------------------------------------
.CATCGTGGTCTCCTGTGCGGCTGG.......................................................................................................................................................................................................2411.001.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................GGGTGCTGGTGGGAGCCGTGC.....................................................................................2111.001.00--------------------------------------------------------------------------------------------------------------------------------------------------1.00-----
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGTGA.....................................................................................241.000.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................TGGGTGCTGGTGGGAGCCGTG......................................................................................2111.001.00--------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................AGTGATTCGCTGCATGACCA.2011.001.00----------------------------------------------------------------------------------------------------------1.00---------------------------------------------
.......................................................................................................................................................TTCGGCTCTCTCCCTCACCCTAG..................................................2311.001.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.................................TCAGCTCTGTGGAGAAGGT............................................................................................................................................................................1911.001.00---------------------------------------------------------------------------------------------------------------------1.00----------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGC..........................................................................................1811.001.00-------1.00------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTA......................................................................................2211.0021.00---------------------------------------------------------------------------1.00----------------------------------------------------------------------------
........................................................................................................................................................................................................CAAAGTGATTCGCTGCATGACCA.2311.001.00-------------------------------------------------------------------------------------------------1.00------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTATT.................................................2311.002.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGAAGA....................................................................................2411.0011.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGTT......................................................................................2311.003.00------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................TCCCTCACCCTAGAAGCTCACG.........................................221.000.00---------------------------1.00----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGTAA.....................................................................................2411.003.00------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTTAA....................................................................................2411.0021.00---------------------------------------------------------------------------------------------1.00----------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCA.....................................................1911.004.00------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................CGGCTCTCTCCCTCACCCTAGAT................................................2311.009.00------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTGTAA...................................................................................2511.0033.00------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCAG...................................................2111.002.00---------1.00----------------------------------------------------------------------------------------------------------------------------------------------
......................TGGTGTCACCATCAGCTCTGTGGAGAAGAAG...........................................................................................................................................................................311.000.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTTA.....................................................................................2311.0021.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCAAG..................................................2211.002.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
..............................CCATCAGCTCTGTGGAGAAGA.............................................................................................................................................................................211.000.00----------------------------------------------------------1.00---------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGTCAT....................................................................................2511.003.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGA.......................................................................................2211.009.00-------------1.00------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................AGTGATTCGCTGCATGACCTT211.000.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................CTTGTGTGAGGGGAGGGTTGA.................................................................................................................................2111.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------
..................CGGCTGGTGTCACCATCAG...........................................................................................................................................................................................1911.001.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTAGAA................................................2411.001.00--------------------------------------------------------------------------------------------------------------------------1.00-----------------------------
..............TGTGCGGCTGGTGTCACCATC.............................................................................................................................................................................................2111.001.00----------------------------------------------------------------------1.00---------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCCA...................................................2111.002.00---------1.00----------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCTTAT..................................................2211.004.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTGTG....................................................................................2411.0033.00--------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
...............................CATCAGCTCTGTGGAGAAG..............................................................................................................................................................................1911.001.00------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................GGGTGGGTGCTGGTGGGAGCCGT.......................................................................................2311.001.00------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
..............................................................................................................TAATGGGTGGGTGCTGGTGGGAGCCG........................................................................................2611.001.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGTAAT....................................................................................2511.003.00----------------------------------------------------------------------------------------------------------------------------------1.00---------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTTTT.................................................2311.006.00-----------------------------------------------------------------------------------------------------------------------1.00--------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTCAA....................................................................................2411.0021.00-------------1.00------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................ATGGGTGGGTGCTGGTGGGAGCCG........................................................................................2411.001.00---------1.00----------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................ATGGGTGGGTGCTGGTGGGAGCCGTGT.....................................................................................271.000.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAG...........................................................................................1730.670.67--------------------------0.67-----------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................ATTCGGCTCTCTC.............................................................1390.560.56-----------------------------------------------------------------------------------------------------------------------------------------------------0.330.22-
..............................................................................................................................................................................................................GATTCGCTGCATGA....1420.500.50-------------------------------0.50------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................GGTGCTGGTGGGAGCCG........................................................................................1720.500.50-----------------------------------------0.50--------------------------------------------------------------------------------------------------------------
.....................................................................................................................TGGGTGCTGGTGGGAGC..........................................................................................1750.200.20-------------------------------------------------------------------------------------------------------------------------------------------------------0.20
..............................................................................................................................................................CTCTCCCTCACCCTAG..................................................1660.170.17-0.17------------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
ACATCGTGGTCTCCTGTGCGGCTGGTGTCACCATCAGCTCTGTGGAGAAGGTGCCCATCTCAGCCCTGATGCCCCTTGTGTGAGGGGAGGGTTGACCCACGAATGGCAGCTAATGGGTGGGTGCTGGTGGGAGCCGTGCCCTGGCCACTCATTCGGCTCTCTCCCTCACCCTAGAAGCTGATGGCATTCCAGCCAGCCCCCAAAGTGATTCGCTGCATGACCAA
..................................................................................................................(((((((....((.((((((((.((....))........)))))))).))))))))).....................................................
...............................................................................................................112...........................................................174................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR189784SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR037935(GSM510473)
293cand3. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR015362(GSM380327)
Naïve B Cell (Naive138). (B cell)		SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR189787DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR189785SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR189783SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037938(GSM510476)
293Red. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		GSM339994(GSM339994)
hues6. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189786SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR029124(GSM416753)
HeLa. (hela)		TAX577743(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		GSM339996(GSM339996)
hues6Neuron. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)		SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR029130(GSM416759)
DLD2. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343335SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR343334SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR040015(GSM532900)
G623T. (cervix)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR191530(GSM715640)
132genomic small RNA (size selected RNA from . (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR343336SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR191462(GSM715572)
1genomic small RNA (size selected RNA from to. (breast)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR040024(GSM532909)
G613N. (cervix)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR040011(GSM532896)
G529T. (cervix)		SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925AGO2Paz8(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
..........................GTCACCATCAGCTCTCGC.................................................................................................................................................................................... 181.000.00-------------------------------------------------------------------------------------------------------------1.00------------------------------------------
...........................................................................................TTGACCCACGAATGGTGG................................................................................................................... 181.000.00----------------------------------------------------------------1.00---------------------------------------------------------------------------------------
.................................................GGTGCCCATCTCAGCCCT............................................................................................................................................................. 1821.001.00-------------------------------------------------------------------------------------1.00------------------------------------------------------------------
............................................................................................................................................................................................CCAGCCAGCCCCCAACGGA................. 191.000.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................CCAGCCAGCCCCCAACGGG................. 191.000.00----------------------------------1.00---------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................GGCTCTCTCCCTCACCACAG.................................................. 201.000.00-----------------------------------------------------------------------------------------------------1.00--------------------------------------------------
.......................GGTGTCACCATCAGCTCTG...................................................................................................................................................................................... 1911.001.00------------------------------------------------------------------------------------------------------------------------------1.00-------------------------
.................................................GGTGCCCATCTCAGCCCTG............................................................................................................................................................ 1920.500.50----------------------------------------------------------------------------------------------------------------------------------------------------0.50---