ID: hsa-mir-6737
GENE: SLC39A1(1)
chr1:153934777-153935054-


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(5)
AGO2.ip
(1)
AGO3.ip
(2)
B-CELL
(2)
BRAIN
(21)
BREAST
(35)
CELL-LINE
(7)
CERVIX
(3)
FIBROBLAST
(9)
HEART
(5)
HELA
(2)
LIVER
(2)
OTHER
(55)
SKIN
(1)
XRN.ip

Sense strand
GGTGCCCATCTGTGTGCTGCGCCGGCCAGGAGCTAACCATGAAGGCTCAGGTAAGCCTCTCCTTTTCCCCACACTGCTATGAATGCTTGGCTTAGGGAGGGCTCTGGGGCTGGCGGGGAGTGACCAAAGGAGGAGGGAAAGGCAAGGGTAGCCATTGTTTGGGTTGGGGTGGTCGGCCCTGGAGGGGGTTTGTTTGCTTATTCCCCTCTGTGCTTCACCCCTACCCAGCTTCCCGCCAGAAAGCCCTGAGCCTAGTAAGCTGTTTCGCGGGGGGCGTC
...............................................................................................................................................................(((((.(((((((..(((...((((((((.............))))))))..)))))))))).)))))...................................................
..............................................................................................................................................................159..................................................................228................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189782SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR189784DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029124(GSM416753)
HeLa. (hela)
TAX577743(Rovira)
total RNA. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR189785DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
TAX577744(Rovira)
total RNA. (breast)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189783SRR040018(GSM532903)
G701N. (cervix)
TAX577739(Rovira)
total RNA. (breast)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR029131(GSM416760)
MCF7. (cell line)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
TAX577453(Rovira)
total RNA. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
GSM532929(GSM532929)
G702N. (cervix)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR189786SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR040034(GSM532919)
G001N. (cervix)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR040007(GSM532892)
G601T. (cervix)
SRR029126(GSM416755)
143B. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR029127(GSM416756)
A549. (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577746(Rovira)
total RNA. (breast)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAGT.................................................231227.0044.007.0012.003.008.00-5.008.005.005.005.008.008.002.002.003.00-1.004.004.00-7.002.001.005.003.003.005.002.003.001.00--1.003.002.004.003.003.004.003.001.00-2.002.00-1.002.00-4.003.001.001.001.002.001.002.002.001.002.002.002.001.003.001.003.002.00-1.003.00-1.00------1.001.001.001.00-1.002.001.002.00-1.00-----1.00-1.001.00--1.00-1.00-1.00-1.00-1.001.00----1.00--1.00-1.001.00--1.00-1.001.001.00---1.00--1.00---1.001.00-1.00--1.001.00---
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAGA.................................................231129.0044.001.005.001.002.0011.004.003.00-5.002.002.001.004.00-1.00-2.00-1.00--2.002.001.001.003.001.003.001.002.003.00-1.002.002.00-1.001.00--2.002.002.00-3.003.002.00--1.001.00-2.001.002.001.001.002.00--1.001.00-1.00-1.002.001.00-1.001.002.00---2.001.00---1.00-1.00-1.00--1.001.001.00--1.00----1.00----1.00-1.00------1.001.00-------1.00--1.00---1.00-1.00--1.00------1.00------1.00-
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAG..................................................22144.0044.006.001.009.002.00-1.002.00-2.001.00--1.00--4.00-1.001.00--2.001.00---------2.00------------------1.00------1.00-------1.001.00-1.00-------1.00----------------------------1.00--------------1.00--------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAGTA................................................24113.0044.001.00--1.00---------1.001.00-1.001.001.00-----1.00---1.00-1.00------------1.00------------------------------------------2.00-------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAGC.................................................23111.0011.001.00----3.00-------1.001.00--1.00----1.00-------1.00--------------------------------------------------1.00---------------------------1.00--------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCA...................................................2119.009.00-----1.001.001.00-------1.00-------------1.00--------------------1.00-----------------------2.00-------------------------------------------------------------1.00-----------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAGTT................................................2417.0044.00------------2.001.00---------------1.00---------------------1.00------------------------1.00--1.00--------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCATT.................................................2315.009.00-1.00---1.00--1.00------------------------------------------------------1.00----------------------------------1.00-------------------------------------------------
...................................................................................................................................................................TTGGGGTGGTCGGCCCTGGAG..............................................................................................2115.005.00---1.00------------------1.00---------1.00----------------------------------------1.00------------------------------------------------------------1.00-------------
.........................................................................................................................................................................................................................................CGCCAGAAAGCCCTGAGCC..........................1914.004.00-------3.00------------------------------------1.00-------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTGGGGTGGTCGGCCCTGGAGGATC..........................................................................................2514.003.00-------------------4.00--------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................GTTGGGGTGGTCGGCCCTGGAGG.............................................................................................2314.004.003.00------------1.00--------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACC.....................................................1914.004.00---------2.00-------------------------------2.00----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCC....................................................2013.003.00--1.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTGGGGTGGTCGGCCCTGGAGG.............................................................................................2213.003.00----------------1.00-------1.00-----------------------------------------------------------------1.00---------------------------------------------------------
.........................................................................................................................................................................................................................CCCCTACCCAGCTTCCCGCCAGAAAGCCCTGAGC...........................3413.003.00-------------------------------3.00--------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTGGGGTGGTCGGCCCTGGAGATC...........................................................................................2413.005.00-------------------3.00--------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTGGGGTGGTCGGCCCTGGAGGGGAT.........................................................................................263.000.00----3.00-----------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................TGGGTTGGGGTGGTCGGCCCTGGAGG.............................................................................................2613.003.00---1.00---------1.00----------------------------------------------------------1.00---------------------------------------------------------------------------
.............................................................................................................................................................................................................CTCTGTGCTTCACCCCTACCC....................................................2112.002.00-----------------------------------------------2.00----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................CTCTGTGCTTCACCCCTACCCAGT.................................................242.000.00-----------------------------------------------2.00----------------------------------------------------------------------------------------------------
..............................................................................................................................................................TTGGGTTGGGGTGGTCGGCCCTG.................................................................................................2312.002.00----2.00-----------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTAC......................................................1812.002.00-1.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAGGGGG..............................................2611.0044.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................GACCAAAGGAGGAGGTATG..........................................................................................................................................191.000.00----------------------------------------------------------------------------------------------------1.00-----------------------------------------------
...................................................................................................................................................................TTGGGGTGGTCGGCCCTGGAGGGGTTTT.......................................................................................281.000.00---------------------------------------------------------------------------------------------------------------------1.00------------------------------
..........................................................................................................GGGCTGGCGGGGAGTGACCAAAGGAG..................................................................................................................................................2611.001.00----------------------------------------1.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCTAGA.................................................2311.004.00-------------------------------------------------------------------------------------------1.00--------------------------------------------------------
................................................................................................................................................................................................................TGTGCTTCACCCCTACCCA...................................................1911.001.00-------------------------------------------------------------------------------------------------------------------------------------------------1.00--
..................GCGCCGGCCAGGAGCG....................................................................................................................................................................................................................................................161.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAGTAC...............................................2511.0044.00--------------------------------------------------------------------------------------------------------------1.00-------------------------------------
.....................................................................................................................................................................................................................................................................GTTTCGCGGGGGGCGCA171.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCCG..................................................2211.003.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TGGGGTGGTCGGCCCTGGA...............................................................................................1911.001.00---1.00------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................GTTTCGCGGGGGGCGTCTTC201.000.00---------------------------------------------------------------------------------1.00------------------------------------------------------------------
...................................................................................................................................................................TTGGGGTGGTCGGCCCTGGAGGA............................................................................................2311.003.00-------------1.00--------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAGTAA...............................................2511.0044.00-------1.00--------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................CCCTCTGTGCTTCACCCCTATT.....................................................221.000.00-------------------------------------------------------------1.00--------------------------------------------------------------------------------------
....................................................................................................................................................................TGGGGTGGTCGGCCCTGGAGGG............................................................................................2211.001.00------------------------------------------------------------------------------1.00---------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAT..................................................2211.009.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................CCGCCAGAAAGCCCTGAGCC..........................2011.001.00-------1.00--------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................TTGGGTTGGGGTGGTCGGCCCTGGAGG.............................................................................................2711.001.00-------------1.00--------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................CTCTGGGGCTGGCGGGCTG..............................................................................................................................................................191.000.00-------------------------------------------------------------------------------------------------------------------1.00--------------------------------
....................................................................................................................................................................TGGGGTGGTCGGCCCTGGAGG.............................................................................................2111.001.001.00---------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAAAT................................................2411.009.00----------------1.00-----------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................TTGGGTTGGGGTGGTGCG......................................................................................................181.000.00----------------------------------------------------------------------------------------1.00-----------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACTCAG..................................................2211.002.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.GTGCCCATCTGTGTGCTGCGCCGGCCAGGAGC.....................................................................................................................................................................................................................................................3211.001.00-----------------------------------------------------------------------------------------------------------------------------------1.00----------------
..................................................................................................................................................................GTTGGGGTGGTCGGCCCTGGAG..............................................................................................2211.001.00---1.00------------------------------------------------------------------------------------------------------------------------------------------------
......CATCTGTGTGCTGCGCCGGCCAGG........................................................................................................................................................................................................................................................2411.001.00-------------------------------1.00--------------------------------------------------------------------------------------------------------------------
.....CCATCTGTGTGCTGCGCCGGCC...........................................................................................................................................................................................................................................................2211.001.00------------------------------------------------------------------------1.00---------------------------------------------------------------------------
........................................................................................................................................................................................................................................................AGCCTAGTAAGCTGTTTCGCGGG.......2311.001.00---------------------------------------1.00------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTA.......................................................1711.001.00--------------1.00-------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TGGGGTGGTCGGCCCTGGAG..............................................................................................2011.001.00---1.00------------------------------------------------------------------------------------------------------------------------------------------------
.....CCATCTGTGTGCTGCGCCGGC............................................................................................................................................................................................................................................................2111.001.00----------------------------------------------------------------------------------------------1.00-----------------------------------------------------
................CTGCGCCGGCCAGGAGCTAACCATGAAGGCTCA.....................................................................................................................................................................................................................................3311.001.00-------------------------------1.00--------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTGGGGTGGTCGGCCCTGGAGGGGTT.........................................................................................261.000.001.00---------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CCTGAGCCTAGTAAGCTGTTTCGCGGGGGGC...3111.001.00----------------------------------1.00-----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................GTTGGGGTGGTCGGCCCTGGAGGA............................................................................................2411.004.001.00---------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TGGGGTGGTCGGCCCTGGAAGA............................................................................................2211.001.00--------------1.00-------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCACG.................................................2311.009.00-----------------------------------------------------------1.00----------------------------------------------------------------------------------------
................................................................................................................................................................................................................TGTGCTTCACCCCTACCCAGTTT...............................................231.000.00--------------------------------------------------------------------------------------------------------------------------------1.00-------------------
................CTGCGCCGGCCAGGAGCCAAC.................................................................................................................................................................................................................................................211.000.00---------------1.00------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................AGGGAGGGCTCTGGGGTGTA.....................................................................................................................................................................201.000.00---------------------------------------------------------------------------------------------------------------------------------------1.00------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCCGA.................................................2311.003.00----------------1.00-----------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCTACCCAA..................................................2211.009.00-------------------------------------------1.00--------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCTGTGCTTCACCCCACCC.....................................................191.000.00---------------1.00------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CTGTGCTTCACCCCTACCCAGTT................................................231.000.00---------------------------------------------------------------------------------------------------------------------------------------------1.00------
............................................................................................................................................................................................................................................CAGAAAGCCCTGAGCC..........................1630.330.33---------------------------------------------------------------------------------------------------------------------------------------------------0.33
.......................................................................................................................................................................................................................................................................TTCGCGGGGGGCG..1350.200.20---------------------------0.20------------------------------------------------------------------------------------------------------------------------

Antisense strand
GGTGCCCATCTGTGTGCTGCGCCGGCCAGGAGCTAACCATGAAGGCTCAGGTAAGCCTCTCCTTTTCCCCACACTGCTATGAATGCTTGGCTTAGGGAGGGCTCTGGGGCTGGCGGGGAGTGACCAAAGGAGGAGGGAAAGGCAAGGGTAGCCATTGTTTGGGTTGGGGTGGTCGGCCCTGGAGGGGGTTTGTTTGCTTATTCCCCTCTGTGCTTCACCCCTACCCAGCTTCCCGCCAGAAAGCCCTGAGCCTAGTAAGCTGTTTCGCGGGGGGCGTC
...............................................................................................................................................................(((((.(((((((..(((...((((((((.............))))))))..)))))))))).)))))...................................................
..............................................................................................................................................................159..................................................................228................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189782SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR189784DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029124(GSM416753)
HeLa. (hela)
TAX577743(Rovira)
total RNA. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR189785DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
TAX577744(Rovira)
total RNA. (breast)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR191430(GSM715540)
167genomic small RNA (size selected RNA from . (breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189783SRR040018(GSM532903)
G701N. (cervix)
TAX577739(Rovira)
total RNA. (breast)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR029131(GSM416760)
MCF7. (cell line)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
TAX577453(Rovira)
total RNA. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)
GSM532929(GSM532929)
G702N. (cervix)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR189786SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR040034(GSM532919)
G001N. (cervix)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR040007(GSM532892)
G601T. (cervix)
SRR029126(GSM416755)
143B. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR029127(GSM416756)
A549. (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577746(Rovira)
total RNA. (breast)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................................GCTATGAATGCTTGGCG.......................................................................................................................................................................................... 171.000.00-------------------------------------------------------------------------1.00--------------------------------------------------------------------------
.......................................................CCTCTCCTTTTCCCCAAGGG........................................................................................................................................................................................................... 201.000.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.......ATCTGTGTGCTGCGCATGG............................................................................................................................................................................................................................................................ 191.000.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................GCTATGAATGCTTGGCGA......................................................................................................................................................................................... 181.000.00------------------------------------------------------------------------------------------------------------------1.00---------------------------------
.......ATCTGTGTGCTGCGCAGTC............................................................................................................................................................................................................................................................ 191.000.00---------------1.00------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................CCCAGCTTCCCGCCACA...................................... 171.000.00----------------------------------------------------------------------------------------------------------------------------------------------1.00-----
............................................................................CTATGAATGCTTGGC........................................................................................................................................................................................... 1550.200.20---------------------0.20------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................ACCCAGCTTCCCGC.......................................... 1490.110.11--0.11-------------------------------------------------------------------------------------------------------------------------------------------------