ID: hsa-mir-6727
GENE: CPSF3L(3)
chr1:1247832-1248022-


(2)
AGO1.ip 		(4)
AGO2.ip 		(1)
AGO3.ip 		(23)
B-CELL 		(5)
BRAIN 		(16)
BREAST 		(41)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(6)
HEART 		(4)
HELA 		(5)
LIVER 		(4)
OTHER 		(33)
SKIN 		(1)
XRN.ip

Sense strand
CATCCCCGTAGGCATCTCGCTGGGGCTGCTGAAGCGGGAGATGGCGCAGGGTATGCGGGCTGGGCAGGGCAGGGCAGGGTGCTCGGGGCAGGCGGCTGGGAGCGGCCCTCACATTGATGGCTCCTGCCACCTCCTCCGCAGGGCTGCTCCCTGAGGCCAAGAAGCCTCGGCTCCTGCACGGCACCCTGATC
...............................................................................(((..((((.(((.(((.((((...(((.((.....)).)))))))))).))))))).)))...................................................
............................................................................77..............................................................141................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR189786SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR189782SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR038854(GSM458537)
MM653. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577740(Rovira)
total RNA. (breast)		SRR191534(GSM715644)
153genomic small RNA (size selected RNA from . (breast)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785GSM532888(GSM532888)
G761T. (cervix)		SRR029125(GSM416754)
U2OS. (cell line)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		TAX577744(Rovira)
total RNA. (breast)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR038862(GSM458545)
MM472. (cell line)		SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		TAX577741(Rovira)
total RNA. (breast)		TAX577745(Rovira)
total RNA. (breast)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR038863(GSM458546)
MM603. (cell line)		GSM956925Ago2D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
.................................................................................CTCGGGGCAGGCGGCTGGGAGC........................................................................................22121.0021.004.00-------------2.00--4.00-1.00----------------1.00---------2.001.00---------1.00---------------------------------------------1.00----1.00--------------------1.00-------1.00---1.00-
.................................................................................CTCGGGGCAGGCGGCTGGGAGCGT......................................................................................24120.0020.002.00----1.00---2.001.00-2.00-1.00-2.00---2.00--1.00------1.00--------1.00----------------1.00--1.00------------------------------1.00---1.00------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGCG.......................................................................................23120.0020.001.00-1.00--2.00--3.001.00--------1.00------1.00-----1.00-----1.00-------------1.00--------1.00----------------------------------1.00--1.001.001.00-1.00----------------1.00-----------------------
.........................................................................................................................TCCTGCCACCTCCTCCGCAGT.................................................21119.003.00---3.00-----------1.00----------2.00-3.00-----------------------------1.00------1.00--------1.00------------------1.00---1.00---1.00-------1.00-----------1.00--------1.00-----1.00------
.................................................................................CTCGGGGCAGGCGGCTGGGAGCGA......................................................................................24113.0020.001.003.00---1.00----1.00----------2.001.00----1.00-------------------1.00--------------------------------1.00---------------------------------------------1.00----------------
.................................................................................CTCGGGGCAGGCGGCTGGGAG.........................................................................................21112.0012.00-1.00-----------2.00--2.00-----------------------1.00--------1.00--1.00--------------1.00--------------------------------------------------1.00--------------1.00----1.00----
.................................................................................CTCGGGGCAGGCGGCTGGGAA.........................................................................................2117.004.00---------1.00-1.00-1.001.00--------------1.00--------------------2.00--------------------------------------------------------------------------------------------
........................................................................................................................CTCCTGCCACCTCCTCCGCAGT.................................................226.000.001.00--------------------------------------------------------1.00-----------1.00---1.00----------------------------------------1.00-------------------1.00--------
............CATCTCGCTGGGGCTTCCA................................................................................................................................................................196.000.00----------1.00-----------------------------1.00--1.00-------------------1.00----------------------------------------------------1.00----------1.00---------------
................................................................................GCTCGGGGCAGGCGGCTGGGAGC........................................................................................2315.005.001.00-------------------------------1.00---1.001.00-----------------1.00---------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGA..........................................................................................2014.004.00-------------1.00---------------1.001.00-------------------------------------------------------------1.00--------------------------------------------------
.........................................................................................................................TCCTGCCACCTCCTCCGCACC.................................................2114.002.00---4.00-------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGT........................................................................................2213.0012.00-1.002.00--------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGCGTT.....................................................................................2513.0020.00-1.00----------------1.00------------------------1.00---------------------------------------------------------------------------------------------------
..................................................................................TCGGGGCAGGCGGCTGGGAGC........................................................................................2113.003.00-2.00-------------------------1.00-------------------------------------------------------------------------------------------------------------------
.........................................................................................................................TCCTGCCACCTCCTCCGCAGA.................................................2113.003.00-1.00---------------------------------------1.00----------------------------1.00------------------------------------------------------------------------
............CATCTCGCTGGGGCTTC..................................................................................................................................................................173.000.00---------------------------------------------1.00--------2.00----------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGCGG......................................................................................2413.003.00-----------------------------1.00----------------------1.00----------------------------1.00-------------------------------------------------------------
.........................................................................................................................TCCTGCCACCTCCTCCGCAG..................................................2013.003.00---------------1.00-----------------1.00----------------------------------------------------------------------------1.00--------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGCA.......................................................................................2313.0021.00--------2.00-1.00------------------------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGGGC........................................................................................2213.001.001.00-----------------1.00---1.00------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................TCCTGCCACCTCCTCCGCA...................................................1912.002.00--------------------------------------2.00--------------------------------------------------------------------------------------------------------
.............ATCTCGCTGGGGCTGCCA................................................................................................................................................................182.000.00------------------------1.00----------1.00-----------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGG............................................................................................1812.002.00------------------------------1.00-------------------------------------------------------------------------------------------------------------1.00--
.............................................................................................................................GCCACCTCCTCCGCAGT.................................................172.000.00-------------------------------------------------------------2.00---------------------------------------------------------------------------------
........................................................................................................................CTCCTGCCACCTCCTCCGCATA.................................................222.000.00---------------------------------------------------------------------------------------1.00----------------1.00--------------------------------------
.................................................................................................................................................................AAGCCTCGGCTCCTGCACGGCACCCCG...272.000.00----2.00------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................GGCAGGCGGCTGGGAGCGA......................................................................................192.000.00-------------------------2.00---------------------------------------------------------------------------------------------------------------------
................................................................................GCTCGGGGCAGGCGGCTGGGAGCGT......................................................................................2512.001.00-----1.00------------------------------------1.00----------------------------------------------------------------------------------------------------
................................................................................GCTCGGGGCAGGCGGCTGGGAGA........................................................................................232.000.00------------1.00-------1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAAA........................................................................................2212.004.00------1.00-------------------1.00--------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................AAGCCTCGGCTCCTGCACGGCACCCTGAC.292.000.00----1.00------------------------------------------------1.00-----------------------------------------------------------------------------------------
...............................................................................TGCTCGGGGCAGGCGGCTGGGAGCGT......................................................................................262.000.00------------1.00-------1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGA........................................................................................2212.0012.002.00----------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGCGAT.....................................................................................2512.0020.00--1.00------------------------------1.00-------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGGGCG.......................................................................................2312.001.00--2.00--------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CCCTGAGGCCAAGAAGCCTCGGCTCCTGCACGGCA........3512.002.00-------------------------------------------------------------------------------------------------------------------1.00--------1.00------------------
.........................................................................................AGGCGGCTGGGAGCGGCCCTCACCTTG...........................................................................271.000.00-----------------------------------1.00-----------------------------------------------------------------------------------------------------------
........................................................................................................................CTCCTGCCACCTCCTCCGCTTT.................................................2211.001.00-----------------------------------------1.00-----------------------------------------------------------------------------------------------------
........................................................................................................................CTCCTGCCACCTCCTCCGCAGTT................................................231.000.00------------------------------------------------1.00----------------------------------------------------------------------------------------------
....................TGGGGCTGCTGAAGCGGGAGATGG...................................................................................................................................................2411.001.00-------------------------------------------------------------------------------------------------------------------------------------------1.00---
..............TCTCGCTGGGGCTGCTGAAGCGG..........................................................................................................................................................2311.001.00--------------------------------------------------------------1.00--------------------------------------------------------------------------------
......................GGGCTGCTGAAGCGGGAGA......................................................................................................................................................1911.001.00-------------------1.00---------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................TCCTGCCACCTCCTCCGCACT.................................................2111.002.00---------------------------------------------------------------------------------------------------------------------------------------1.00-------
..........................................................................................................................CCTGCCACCTCCTCCGCCTC.................................................201.000.00------------------------------------------------------------------------------1.00----------------------------------------------------------------
........................................................................................................................CTCCTGCCACCTCCTCCGCAGTTT...............................................241.000.00---------------------------------------------------------------------------------------------------------1.00-------------------------------------
..................................................................................TCGGGGCAGGCGGCTGGGAGCCT......................................................................................2311.003.00-----------------------1.00-----------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGAAG..........................................................................................201.000.00-------------------------------------------------------------------------------1.00---------------------------------------------------------------
..............................GAAGCGGGAGATGGCGTACG.............................................................................................................................................201.000.00--------------------------------------------------------------------1.00--------------------------------------------------------------------------
........................................................................................................................CTCCTGCCACCTCCTCCGCATT.................................................221.000.00----------------------------------1.00------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGCGGA.....................................................................................2511.003.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................CGGGGCAGGCGGCTGGATAA........................................................................................201.000.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGCGAG.........................................................................................211.000.00---------------------------------------1.00-------------------------------------------------------------------------------------------------------
............CATCTCGCTGGGGCTTTCA................................................................................................................................................................191.000.00---------------------------------------------1.00-------------------------------------------------------------------------------------------------
..............................................................................GTGCTCGGGGCAGGCGGCTGGGAGC........................................................................................2511.001.00-----------------------------------------------------------1.00-----------------------------------------------------------------------------------
..................................................................................TCGGGGCAGGCGGCTGGGAGCG.......................................................................................2211.001.00------1.00----------------------------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGGA.........................................................................................2111.001.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................CTCCTGCCACCTCCTCCGCCGTT................................................2311.001.00-------------------------------------------------------------------------------------------1.00---------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGGGT......................................................................................2411.0012.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------
..................................................................................TCGGGGCAGGCGGCTGGGAGCGA......................................................................................2311.001.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGAAA..........................................................................................201.000.00-----------------------------------------------------------------------------------------------------------------------------1.00-----------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGCGCT.....................................................................................2511.0020.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGCACC.....................................................................................2511.0021.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................CTCCTGCCACCTCCTCCGC....................................................1911.001.00-------------------1.00---------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................TCCTGCCACCTCCTCCGCAGTAT...............................................2311.003.00------------------------------------------------------------------1.00----------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGGGGG.......................................................................................2311.001.00-----------------------------------------------------------------------------------------------------------------------------------1.00-----------
.........................................................................................................................TCCTGCCACCTCCTCCGCAGAAT...............................................2311.003.00---------------------------------------------------------------------------------------------------------------------1.00-------------------------
................................................................................GCTCGGGGCAGGCGGCTGGGAGT........................................................................................231.000.001.00----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................TCGGGGCAGGCGGCTGGGAGCGT......................................................................................2311.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................TCCTGCCACCTCCTCCGCAGAAA...............................................2311.003.00---------------------------------------------------1.00-------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGA...........................................................................................1911.002.00-------------------------------1.00---------------------------------------------------------------------------------------------------------------
..................................................................................TCGGGGCAGGCGGCTGGGGGA........................................................................................211.000.00------1.00----------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................TCGGCTCCTGCACGGG.........161.000.00------------------------------------------------------------------------------------------------------------------------1.00----------------------
.............ATCTCGCTGGGGCTGCAA................................................................................................................................................................181.000.00--------------------------------------------------------------------------------------1.00--------------------------------------------------------
................................................................................GCTCGGGGCAGGCGGCTGGGAA.........................................................................................221.000.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------
...........................................................CTGGGCAGGGCAGGGCAGGGAA..............................................................................................................221.000.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------
..................................................................................TCGGGGCAGGCGGCTGGGAA.........................................................................................201.000.00----------------------------------------------------------------------------------------------------------1.00------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGCAAA.....................................................................................2511.0021.00------------------------------------------------------------------------------------1.00----------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGT............................................................................................181.000.00-----------------------1.00-----------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGGG.........................................................................................2111.001.00------------------1.00----------------------------------------------------------------------------------------------------------------------------
............CATCTCGCTGGGGCTTGC.................................................................................................................................................................181.000.00--------------------------------------------1.00--------------------------------------------------------------------------------------------------
..............TCTCGCTGGGGCTGCTGAAGCGGG.........................................................................................................................................................2411.001.00--------------------------------------------------------------1.00--------------------------------------------------------------------------------
..........................................................................................................................CCTGCCACCTCCTCCGCAGA.................................................201.000.00-----------------------------------------------------------------------------------------1.00-----------------------------------------------------
..................................................................................TCGGGGCAGGCGGCTGGGGAT........................................................................................211.000.00-----------------------------------------------------------------------------------------------------------------1.00-----------------------------
.................................................................................CTCGGGGCAGGCGGCAGC............................................................................................181.000.00-------------------1.00---------------------------------------------------------------------------------------------------------------------------
................................................................................GCTCGGGGCAGGCGGCTGGGAGG........................................................................................231.000.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------
......................GGGCTGCTGAAGCGG..........................................................................................................................................................1511.001.00------------------------------------------1.00----------------------------------------------------------------------------------------------------
....................TGGGGCTGCTGAAGCGGGAGA......................................................................................................................................................2111.001.00--------------------------------------------------------1.00--------------------------------------------------------------------------------------
.........................................................................................................................TCCTGCCACCTCCTCCGCAAT.................................................2111.002.001.00----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................TCGGGGCAGGCGGCTGGGAGCGTAG....................................................................................2511.001.00------------------------1.00----------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGTCAT.....................................................................................2511.0012.00----------------------------------------------------------------------------------------1.00------------------------------------------------------
........................................................................................................................CTCCTGCCACCTCCTCCGCAGTA................................................231.000.00--------------------------------------------------------------------------------------------------------------------------------1.00--------------
.........................................................................................................................TCCTGCCACCTCCTCCGCAGAA................................................2211.003.00------------------------------------------------------------------------------------------------------------------------------------1.00----------
............CATCTCGCTGGGGCTTA..................................................................................................................................................................171.000.00--------------------------------------------1.00--------------------------------------------------------------------------------------------------
................................................................................GCTCGGGGCAGGCGGCTGGGAGCA.......................................................................................2411.005.00---------------------------------------------------------------------------------------------------------------1.00-------------------------------
.........................................................................................................................TCCTGCCACCTCCTCCGCAGTA................................................2211.003.00-----------------------------------------------------------------------------------1.00-----------------------------------------------------------
...................................................................................CGGGGCAGGCGGCTGGA...........................................................................................171.000.00----------------------------------------------------------------------------------------------------------------1.00------------------------------
......................................................GCGGGCTGGGCAGGGCAGGG.....................................................................................................................2011.001.00-------------------------------------------------------1.00---------------------------------------------------------------------------------------
.....................GGGGCTGCTGAAGCGGGAGATGGCGCAGG.............................................................................................................................................2911.001.00------1.00----------------------------------------------------------------------------------------------------------------------------------------
...............................................................................TGCTCGGGGCAGGCGGCTGGGAGCC.......................................................................................251.000.00--------------------------------1.00--------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGCGGC.....................................................................................2511.001.00------------------------------------------------------------------------------------------------1.00----------------------------------------------
..................................................................................TCGGGGCAGGCGGCTGGGGGC........................................................................................211.000.00------------------------------------------------1.00----------------------------------------------------------------------------------------------
..................................................................................TCGGGGCAGGCGGCTGGGAT.........................................................................................201.000.00---------------------------1.00-------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGGGA........................................................................................2211.001.00-------------------------------1.00---------------------------------------------------------------------------------------------------------------
....................TGGGGCTGCTGAAGCGGGA........................................................................................................................................................1911.001.00----------------------1.00------------------------------------------------------------------------------------------------------------------------
........................................................................................................................CTCCTGCCACCTCCTCCGCAGA.................................................221.000.00-------------------------------------------------------------------------------------1.00---------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGTAA..........................................................................................201.000.00-----------------------------------------------------------------------------------------------------------1.00-----------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGG...........................................................................................1911.001.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAAAG.......................................................................................2311.004.00-------------------------------------------------1.00---------------------------------------------------------------------------------------------
........................................................................................................................CTCCTGCCACCTCCTCCCAG...................................................201.000.00-----------------------------------------------------------------------1.00-----------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGCGGTAT...................................................................................2711.003.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................TGCTCGGGGCAGGCGGCTGGGAGCAT......................................................................................261.000.00----------------------------------------------------------------------------------1.00------------------------------------------------------------
................................................................................GCTCGGGGCAGGCGGCTGGGAGCG.......................................................................................2411.001.00------------------------1.00----------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGCGTTA....................................................................................2611.0020.00------------------------------------------------------------1.00----------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAAAA.......................................................................................2311.004.00------1.00----------------------------------------------------------------------------------------------------------------------------------------
................................................................................GCTCGGGGCAGGCGGCTGGGGGTT.......................................................................................241.000.00-----------------------------------------------------------------------------1.00-----------------------------------------------------------------
............................................................................................CGGCTGGGAGCGGCCCTCGG...............................................................................201.000.00---------------------------------------------------------------------------------------------------------------------------1.00-------------------
.................................................................................CTCGGGGCAGGCGGCTGGGGAAG.......................................................................................2311.001.00----------------------------------1.00------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGCTAG.....................................................................................2511.0021.00----------1.00------------------------------------------------------------------------------------------------------------------------------------
.................................................................................CTCGGGGCAGGCGGCTGGGAGCAT......................................................................................2411.0021.00----------------------------------------------------------1.00------------------------------------------------------------------------------------
...............................................................................TGCTCGGGGCAGGCGGCTG.............................................................................................1911.001.00---------------------------------------------------------------------------1.00-------------------------------------------------------------------
...CCCCGTAGGCATC...............................................................................................................................................................................13100.800.80----------------------------------------------------------------------------------------------------------------------------------------------0.80
....................................................ATGCGGGCTGGGCAGGG..........................................................................................................................1720.500.50---------------------------------------------------------------0.50-------------------------------------------------------------------------------
.....................................................................................GGGCAGGCGGCTGGGAGCG.......................................................................................1920.500.50---------------------0.50-------------------------------------------------------------------------------------------------------------------------

Antisense strand
CATCCCCGTAGGCATCTCGCTGGGGCTGCTGAAGCGGGAGATGGCGCAGGGTATGCGGGCTGGGCAGGGCAGGGCAGGGTGCTCGGGGCAGGCGGCTGGGAGCGGCCCTCACATTGATGGCTCCTGCCACCTCCTCCGCAGGGCTGCTCCCTGAGGCCAAGAAGCCTCGGCTCCTGCACGGCACCCTGATC
...............................................................................(((..((((.(((.(((.((((...(((.((.....)).)))))))))).))))))).)))...................................................
............................................................................77..............................................................141................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR189786SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR189782SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR038859(GSM458542)
MM386. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR038854(GSM458537)
MM653. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577740(Rovira)
total RNA. (breast)		SRR191534(GSM715644)
153genomic small RNA (size selected RNA from . (breast)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189785GSM532888(GSM532888)
G761T. (cervix)		SRR029125(GSM416754)
U2OS. (cell line)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		TAX577744(Rovira)
total RNA. (breast)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR038862(GSM458545)
MM472. (cell line)		SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		TAX577741(Rovira)
total RNA. (breast)		TAX577745(Rovira)
total RNA. (breast)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR038863(GSM458546)
MM603. (cell line)		GSM956925Ago2D5(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
.......................................................................................................................GCTCCTGCCACCTCCTCCGCAAA................................................. 233.000.003.00----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................GCCTCGGCTCCTGCACGGCACCCTGATC 282.000.00----1.00------------------------------------------------1.00-----------------------------------------------------------------------------------------
..................................................................................................................................................................AGCCTCGGCTCCTGCACGGCACCCTGATCC 302.000.00----2.00------------------------------------------------------------------------------------------------------------------------------------------
............................................................................GGGTGCTCGGGGCAGCTTA................................................................................................ 191.000.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................GGGGCAGGCGGCTGGCTCT........................................................................................ 191.000.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................CTGCCACCTCCTCCGAGT.................................................. 181.000.00------------------------------------------------------------------------1.00----------------------------------------------------------------------
..............................................................................GTGCTCGGGGCAGGCGGAGGC............................................................................................ 211.000.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................CCTCCGCAGGGCTGCTC.......................................... 1711.001.00----------------------------------------------------------------------------1.00------------------------------------------------------------------
..........GGCATCTCGCTGGGGCGG................................................................................................................................................................... 181.000.00----------------------------------------------------------------1.00------------------------------------------------------------------------------