ID: hsa-mir-4673
GENE: NOTCH1(29)
chr9:139413968-139414217-


(1)
AGO2.ip
(7)
B-CELL
(7)
BRAIN
(13)
BREAST
(18)
CELL-LINE
(1)
CERVIX
(1)
FIBROBLAST
(7)
HEART
(2)
LIVER
(2)
OTHER
(1)
RRP40.ip
(18)
SKIN
(1)
TESTES

Sense strand
GTCCTGTCCAAAATGATTCTTTCAAGCAGGGCGTGTCCCTCTGGGCACTGGAGTGAGGCAGGGGACGGGCACAGACCCCGGGGGCCCCAGGGCAGGGCCGTGGAGGCCAGGCTCTTGTGTCCAGAGCAGTGTGTCGGGGGTCCAGGCAGGAGCCGGACTGGACCTCAGGGAAGAGGCTGACCCGGCCCCTCTTGCGGCAGGCTTCACCGGCCAGAACTGTGAGGAAAATATCGACGATTGTCCAGGAAAC


SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189782SRR189784SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
TAX577746(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577738(Rovira)
total RNA. (breast)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR038855(GSM458538)
D10. (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040008(GSM532893)
G727N. (cervix)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577742(Rovira)
total RNA. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR038857(GSM458540)
D20. (cell line)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)
............................................................................................................................................TCCAGGCAGGAGCCGGACTGGA........................................................................................22113.0013.00----3.002.00--1.00--------------1.00-------1.00----1.00------1.00-------1.00------1.00--------1.00------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGG.........................................................................................21113.0013.00---1.00---2.00-1.00--1.00-----1.00-----1.00-1.00-------1.00---1.00-----1.00------------------1.00----1.00-----------
................................................................................................................................................................................................................................AAAATATCGACGATTGTCCAGG....2213.003.00--------------1.00-------------1.00---1.00-----------------------------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGT.........................................................................................213.000.00---2.00------1.00---------------------------------------------------------------------
................................................................................................................................................................................................................................AAAATATCGACGATTGTCCAGGA...2313.003.00-------------------------1.00-1.00--------------------1.00-------------------------------
.................................................................................................................................................................................................................................AAATATCGACGATTGTCCAGGA...2213.003.00-----------------------------------1.00--------------1.00-----------1.00-----------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGGAC.......................................................................................2312.002.00------------1.00-----------------------------------------1.00-------------------------
..............................................................................CGGGGGCCCCAGGGCACG..........................................................................................................................................................182.000.00--2.00-----------------------------------------------------------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGA.........................................................................................212.000.00---------1.00-------------------1.00--------------------------------------------------
.............................................................................................................................................................................................................................AGGAAAATATCGACGATTGTC........2111.001.00-----------------------------------------1.00--------------------------------------
................................................................................................................................................................................................................GGCCAGAACTGTGAGTAAA.......................191.000.001.00-------------------------------------------------------------------------------
............ATGATTCTTTCAAGCAGGGCGTGTC.....................................................................................................................................................................................................................2511.001.00-------------------------------------------------------------1.00------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGGAT.......................................................................................2311.0013.00-----------------1.00--------------------------------------------------------------
.............................................................................................................................GCAGTGTGTCGGGGGT.............................................................................................................1611.001.00-1.00------------------------------------------------------------------------------
.....................................................TGAGGCAGGGGACGGGGC...................................................................................................................................................................................181.000.00-1.00------------------------------------------------------------------------------
................................................................................................................................................................................CTGACCCGGCCCCTCTTGCGGCA...................................................2311.001.00---------------1.00----------------------------------------------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACAGG.........................................................................................211.000.00--------1.00-----------------------------------------------------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGGAA.......................................................................................2311.0013.00----------------------------------------------------1.00---------------------------
...................................................................................................................................................................................................................CAGAACTGTGAGGAAAATATCGACGATTGTCC.......3211.001.001.00-------------------------------------------------------------------------------
......................................................................................................................................................................................................................AACTGTGAGGAAAATATCGACG..............2211.001.00------1.00-------------------------------------------------------------------------
...........................................................................CCCCGGGGGCCCCAGT...............................................................................................................................................................161.000.00-------------------------------------------------------1.00------------------------
...............................................................................................................................................................................................................CGGCCAGAACTGTGAGGAAAATATC..................2511.001.001.00-------------------------------------------------------------------------------
...........................................................................................................................................................................................................TCACCGGCCAGAACTGTGAGGAAAATA....................2711.001.001.00-------------------------------------------------------------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGGGC.......................................................................................2311.0013.00--------------------1.00-----------------------------------------------------------
....................................................................................................................................................................................CCCGGCCCCTCTTGCGGCAG..................................................2011.001.00----------1.00---------------------------------------------------------------------
......................................................................................................................................................................AGGGAAGAGGCTGACCTC..................................................................181.000.00----------------------------------------1.00---------------------------------------
...................................................................................................................................................................................................................................ATATCGACGATTGTCCAGGCAAC231.000.00------1.00-------------------------------------------------------------------------
..............................................................................................................................................................TGGACCTCAGGGAAGAGGCTGA......................................................................2211.001.00------------------------------1.00-------------------------------------------------
...........................................................................................................................................................................................................TCACCGGCCAGAACTCTG.............................181.000.00----------------------------------------------------------------1.00---------------
..................................................................................................................................................................................................................................AATATCGACGATTGTCCAGGAAAT241.000.00---------------------------------------------------------------------1.00----------
......................................................................................................................................................................................................................AACTGTGAGGAAAATATCGA................2011.001.00-----------------------------------------------1.00--------------------------------
....................................................................................................................................................................TCAGGGAAGAGGCTGAAA....................................................................181.000.00------------------------------------------------------------1.00-------------------
....................................................................................................................................................................................................................AGAACTGTGAGGAAAATATCGACGAT............2611.001.00------------------------------------------1.00-------------------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGGACC......................................................................................2411.001.00-------------------1.00------------------------------------------------------------
................................................................................................................................................................................................................................AAAATATCGACGATTGTCCAGGAA..2411.001.00---------------------1.00----------------------------------------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGGACA......................................................................................2411.002.00-----------------------------------------------------------------------1.00--------
............................................................................................................................................TCCAGGCAGGAGCCGGACTGGTCC......................................................................................2411.0013.00---------------------------------------------1.00----------------------------------
..............................................................................................................................................CAGGCAGGAGCCGGACTG..........................................................................................1811.001.00--------------------------------------------------------1.00-----------------------
.............................................................................................................................................CCAGGCAGGAGCCGGACTG..........................................................................................1911.001.00-------------------------------------------------1.00------------------------------
.............................................................................................................................................................................................................ACCGGCCAGAACTGTGAGGAAAATATCGACG..............3111.001.001.00-------------------------------------------------------------------------------
..............................................................................................................................................CAGGCAGGAGCCGGACTGGA........................................................................................2011.001.00---------------------------------1.00----------------------------------------------
............................................................................................................................................TCCAGGCAGGAGCCGGACT...........................................................................................1911.001.00-----------------------------------------------------------1.00--------------------
.....................................................................................................................................................................................................................GAACTGTGAGGAAAATATCGACGATTGT.........2811.001.00---------------------------------------1.00----------------------------------------
..............................................................................................................................................CAGGCAGGAGCCGGACTGGACC......................................................................................2211.001.00---------------------------------------------------------1.00----------------------
................................................................................GGGGCCCCAGGGCAGGCGG.......................................................................................................................................................191.000.00--1.00-----------------------------------------------------------------------------
.................................................................................................................................................................................................................GCCAGAACTGTGAGGAAAA......................1911.001.00-------------------------------------1.00------------------------------------------
.....................................................................................................................................................................................................................................ATCGACGATTGTCCAGGAAAC2111.001.00-----------------------------------------------------------------1.00--------------
......................................................................................................................................................................................................................AACTGTGAGGAAAATGAGT.................191.000.00-----------1.00--------------------------------------------------------------------
.............................................................................................................................................................................................................ACCGGCCAGAACTGTGAAG..........................191.000.00----------------------1.00---------------------------------------------------------
...........................................................................................................................................................................................................TCACCGGCCAGAACTGTGAGG..........................2111.001.00-----------1.00--------------------------------------------------------------------
............................GGGCGTGTCCCTCTG...............................................................................................................................................................................................................1520.500.50---------------------------------------------------------------------------0.50----
................................................................................................................TCTTGTGTCCAGAGCAG.........................................................................................................................1720.500.50------------------------------------------------------------------------0.50-------
..........................................................................................................................................................................................................TTCACCGGCCAGAAC.................................1520.500.50----------------------------------------------------------------------------0.50---
...............................................................................................................................................................................................................CGGCCAGAACTGTGAGGA.........................1820.500.500.50-------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................ACGATTGTCCAGGAA..1530.330.33-----------------------------------------------------------------------------0.33--
....................................................................................................................................................GGAGCCGGACTGGAC.......................................................................................1540.250.25-----0.25--------------------------------------------------------------------------
...................................................................................................................................................................................................................CAGAACTGTGAGGAAAAT.....................1840.250.25------------------------------------------------------------------------------0.25-
................................................................................................................................................................................................................GGCCAGAACTGTGAGGA.........................1740.250.25-------------------------------------------------------------------------------0.25
..........................................................................................................................................................................................................................................CGATTGTCCAGGA...13100.100.10-----------------------------------------------------------------------------0.10--

Antisense strand
GTCCTGTCCAAAATGATTCTTTCAAGCAGGGCGTGTCCCTCTGGGCACTGGAGTGAGGCAGGGGACGGGCACAGACCCCGGGGGCCCCAGGGCAGGGCCGTGGAGGCCAGGCTCTTGTGTCCAGAGCAGTGTGTCGGGGGTCCAGGCAGGAGCCGGACTGGACCTCAGGGAAGAGGCTGACCCGGCCCCTCTTGCGGCAGGCTTCACCGGCCAGAACTGTGAGGAAAATATCGACGATTGTCCAGGAAAC


SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189782SRR189784SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
TAX577746(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577738(Rovira)
total RNA. (breast)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR038855(GSM458538)
D10. (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040008(GSM532893)
G727N. (cervix)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577742(Rovira)
total RNA. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR038857(GSM458540)
D20. (cell line)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)
........................................................................................AGGGCAGGGCCGTGGACCC............................................................................................................................................... 191.000.00----------------------------------------------------------------------1.00---------
........................................................................................................................................................................................GCCCCTCTTGCGGCATCGG............................................... 191.000.00----------------------------------------------1.00---------------------------------
.........................................................................................................................................................................................................CTTCACCGGCCAGAAA................................. 161.000.00-------------1.00------------------------------------------------------------------
.......................................................................................................................................................GCCGGACTGGACCTCGATC................................................................................ 191.000.00-1.00------------------------------------------------------------------------------
.................................................GGAGTGAGGCAGGGGGCGC...................................................................................................................................................................................... 191.000.00----------------1.00---------------------------------------------------------------
......................................................GAGGCAGGGGACGGGC.................................................................................................................................................................................... 1611.001.00-----------------------------------------------------1.00--------------------------
...........................................................................................................................................................GACTGGACCTCAGGGATTG............................................................................ 191.000.00------------------------------------------------------------------1.00-------------
.........................GCAGGGCGTGTCCCT.................................................................................................................................................................................................................. 1520.500.50-------------------------------------------------------------------------0.50------
......................................................................................................................................................................................................................................TCGACGATTGTC........ 1220.500.50--------------------------------------------------------------------------0.50-----
...................................................................................................................TGTGTCCAGAGCAGT........................................................................................................................ 1580.120.120.12-------------------------------------------------------------------------------