ID: hsa-mir-1909
GENE: REXO1
chr19:1816104-1816273-


(4)
AGO2.ip
(1)
AGO3.ip
(12)
B-CELL
(5)
BRAIN
(19)
BREAST
(47)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(5)
HEART
(4)
HELA
(6)
LIVER
(3)
OTHER
(1)
RRP40.ip
(19)
SKIN
(2)
UTERUS
(1)
XRN.ip

Sense strand
CCTGCGGAACCTCATGGCCGACTACCTCAGACAGATCATCCAGGACAATGGTGAGTGCCGGTGCCTGCCCTGGGGCCGTCCCTGCGCAGGGGCCGGGTGCTCACCGCATCTGCCCCGCAGTGGATGGGCACAGCTCCAGCGAGGACGCCGGCGCCTGCATGCACCTGGTG
..................................................(((((..(((((.(((((...(((.....)))...))))).))).))..)))))..................................................................
..................................................51.........................................................110..........................................................
SizePerfect hitTotal NormPerfect NormSRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR189782SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR189786SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR037931(GSM510469)
293GFP. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343336SRR343334SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
GSM416733(GSM416733)
HEK293. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR038855(GSM458538)
D10. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR038861(GSM458544)
MM466. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
GSM956925Ago2(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR189784SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR343337SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
TAX577739(Rovira)
total RNA. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR038859(GSM458542)
MM386. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR038857(GSM458540)
D20. (cell line)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR040008(GSM532893)
G727N. (cervix)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR038862(GSM458545)
MM472. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR189787GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
....................................................................................CGCAGGGGCCGGGTGCTCACCG................................................................22116.0016.004.00--1.00--------1.00--------------1.00----1.001.00-2.00--------------1.00---------------------------------1.00-1.00------1.00--------------------1.00-----------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGT...............................................................23114.0016.001.006.00-------1.00--1.00------2.00---------------------------------1.00-----1.00------------1.00-----------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCCTGT.................................................................................................2319.009.00---1.00-----------1.00---------------------1.00-------------1.00----------------------------------------1.00---------1.00--1.00------1.00---------1.00---------
..................................................GTGAGTGCCGGTGCCTGCCCT...................................................................................................2119.009.00---2.00-------------3.00---------------1.00---------1.00-----------1.00-------------------------------------------------------------------1.00--------
..................................................GTGAGTGCCGGTGCCTGCCCTG..................................................................................................2219.009.00---1.001.00----1.00---------------1.00-------------------1.00---------------------1.00-----1.001.00----------------------------------------1.00----------------
..................................................GTGAGTGCCGGTGCCTGCCC....................................................................................................2018.008.00-----1.00--1.00-------1.00-----1.00---1.00------------------------------------1.00-----1.00---------------------------1.00----------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCAC..................................................................2017.007.00-2.00----1.00-------1.00-----1.00------------------------------------------------------------------1.00----------------------1.00---------------------
....................................................................................CGCAGGGGCCGGGTGCTCACC.................................................................2117.007.001.001.00---1.00--------------1.00------------------------------------------------------1.00---------------------------1.00----1.00-----------------------
....................................................................................CGCAGGGGCCGGGTGCTCACATC...............................................................2315.007.00--5.00---------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCATC..................................................................................................225.000.00--5.00---------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGC...............................................................2315.005.001.00--1.00-------1.00-----------------1.00----1.00-------------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCACCGCAT.............................................................2615.005.00-------5.00----------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGA...............................................................2315.0016.00------1.00--1.00-------------------1.00----1.00-----------------------------------------------------------------------------------1.00-------------
...................................................................................GCGCAGGGGCCGGGTGCTCACCGT...............................................................244.000.001.00------------------------------------------------1.00---------------------------------------------1.00-----------1.00------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCC................................................................2214.007.00-1.00---------1.00-------------------------------------------------------------------------------------------------1.00------------------1.00---
..................................................GTGAGTGCCGGTGCCTGCCCTGTT................................................................................................2414.009.00--------2.00-----------------------------------------------------------------------------------------------1.00----------------------1.00----
..................................................GTGAGTGCCGGTGCCTGCCCTGA.................................................................................................2314.009.00----------------2.00-----------------------------------------------1.00-------------------------1.00-----------------------------------------
.................................GATCATCCAGGACAATG........................................................................................................................1714.004.00---------1.00--------------------------1.00----------------------------------------------------1.00----1.00-------------------------------------
.......AACCTCATGGCCGACTACCTCAGA...........................................................................................................................................2413.003.00-------------------------------2.00--------------------------1.00-------------------------------------------------------------------------
.....................................................................................GCAGGGGCCGGGTGCTCACCGA...............................................................223.000.001.00---1.00-------------------------------------------1.00-----------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCCTGTA................................................................................................2413.009.00--------2.00------------------------------------------------------------------------------------------1.00--------------------------------
...................................................TGAGTGCCGGTGCCTGCCCTGT.................................................................................................223.000.00-1.00-----------------------------------------------------------1.00----------------------------------------------------------------1.00-----
.....................................................................................GCAGGGGCCGGGTGCTCACCGT...............................................................223.000.001.00-----1.00---1.00-------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCA...................................................................1913.003.00-1.00-------------------------------------1.00------------------------------------------------------------1.00-------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCACCCT...............................................................242.000.00----------1.00-------------------------1.00-----------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGCTA.............................................................2512.005.00----------------------------------------2.00-------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGAAA.............................................................2512.0016.00------2.00-----------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGCCGGTGCCTGCCCTGG.................................................................................................2212.002.00---------------2.00--------------------------------------------------------------------------------------------------------------------
.............................GACAGATCATCCAGGACA...........................................................................................................................1822.002.00--------------------0.50--------------------0.50----------------------------------------------------------------------------------------0.500.50
..................................................GTGAGTGCCGGTGCCTG.......................................................................................................1712.002.00----------------------1.00---------------1.00---------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCCTTT.................................................................................................2312.009.00------------------1.00---------------------------------------------------------------------------------------------------------1.00-------
...........................CAGACAGATCATCCAGGAC............................................................................................................................1912.002.00------------------------------1.00---------------------------------------1.00-------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCTTT..............................................................2412.007.002.00-----------------------------------------------------------------------------------------------------------------------------------
................................AGATCATCCAGGACAATG........................................................................................................................1812.002.00--------------------------------------------1.00-------------------------------------------1.00-------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCCT...............................................................2312.007.00-----------------------------------------------------------------------------------1.00-------------------------------------1.00----------
..................................................................................TGCGCAGGGGCCGGGTGCTCTT..................................................................222.000.00------------------2.00-----------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACAAGA..............................................................2412.007.00-----------------------------------------------------------------1.00----------1.00-------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGTA..............................................................2412.0016.00----1.00-----------------------1.00-------------------------------------------------------------------------------------------------------
........................CCTCAGACAGATCATCCAGGACA...........................................................................................................................2312.002.00----------------------------------------------------------------------------------1.00------------------------------------------1.00------
.............................GACAGATCATCCAGGACAAT.........................................................................................................................2012.002.00-----2.00------------------------------------------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCAC..................................................................2112.002.00----2.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCA................................................................2212.007.002.00-----------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCT................................................................2211.007.001.00-----------------------------------------------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCCGT.................................................................231.000.00------------1.00-----------------------------------------------------------------------------------------------------------------------
..............................ACAGATCATCCAGGACAATG........................................................................................................................2011.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------
..............................ACAGATCATCCAGGACAATGTGG.....................................................................................................................2311.001.00-----------------------1.00------------------------------------------------------------------------------------------------------------
....................ACTACCTCAGACAGATCATCCAGGACA...........................................................................................................................2711.001.00------------------------------------------------------------------------------1.00-----------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCCCC.................................................................231.000.001.00-----------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGAAT.............................................................2511.0016.00-----1.00------------------------------------------------------------------------------------------------------------------------------
...........................CAGACAGATCATCCAGGACAATGTGG.....................................................................................................................2611.001.00-----------------------1.00------------------------------------------------------------------------------------------------------------
.........................................................................................GGGCCGGGTGCTCACCGGTT.............................................................201.000.00-----------------------------------------------1.00------------------------------------------------------------------------------------
............................AGACAGATCATCCAGGACAAT.........................................................................................................................2111.001.00---------------------------------------------------------------------------------------------------------------1.00--------------------
............................AGACAGATCATCCAGGACAA..........................................................................................................................2011.001.00--------------------------------------------------------------------------------------------------------------------1.00---------------
....................................................................................CGCAGGGGCCGGGTGCTTA...................................................................191.000.00-----------------------------------------------------------------------------------------------------------------------1.00------------
.............................GACAGATCATCCAGGCCA...........................................................................................................................181.000.00-----------------------------------------1.00------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCCC..................................................................221.000.00----1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCAA..................................................................211.000.00------1.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCTATA................................................................231.000.00----------------------------------------------1.00-------------------------------------------------------------------------------------
........................................................................................................................TGGATGGGCACAGCTCCAGCGAGGACG.......................2711.001.00-----------------------------------------------------------------------------------------------------------------1.00------------------
.........................CTCAGACAGATCATCCAGGA.............................................................................................................................2011.001.00--------------------------------------------------------------1.00---------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCTCC.................................................................221.000.001.00-----------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGC......................................................................................................1811.001.00---------------------------------------------------------1.00--------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCCTAT.............................................................2511.007.00----------------------------1.00-------------------------------------------------------------------------------------------------------
.....................................................................................GCAGGGGCCGGGTGCTCATT.................................................................2031.001.00--------------1.00---------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCAAT.................................................................2111.003.00--------------1.00---------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTT....................................................................181.000.00------------------------------------------------------------------------------------------------1.00-----------------------------------
...................................................................................................................................AGCTCCAGCGAGGACGCCGGCGC................2311.001.00-----------------------------------------------------------------------------------------------------1.00------------------------------
..................................................GTGAGTGCCGGTGCCTGCCAT...................................................................................................211.000.00--------------------------------------------------------------------------------------------------1.00---------------------------------
.......................................................................................................................GTGGATGGGCACAGCTCCAGCGAGGACG.......................2811.001.00-------------1.00----------------------------------------------------------------------------------------------------------------------
.......AACCTCATGGCCGACTACCTCAG............................................................................................................................................2311.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCAT..................................................................2011.003.00-----------------------------------------------------------------------------1.00------------------------------------------------------
..............TGGCCGACTACCTCATG...........................................................................................................................................171.000.00--------------------------------1.00---------------------------------------------------------------------------------------------------
..............................ACAGATCATCCAGGACAACG........................................................................................................................201.000.00--------------------------------------------------------1.00---------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCACCTT...............................................................241.000.00---------------------------------------1.00--------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCCTGC.................................................................................................2311.009.00------------------------------------------------------1.00-----------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCTACC................................................................221.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCACCGA...............................................................251.000.001.00-----------------------------------------------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCCC..................................................................211.000.00----1.00-------------------------------------------------------------------------------------------------------------------------------
........................CCTCAGACAGATCATCCAGG..............................................................................................................................2011.001.00--------------------------------------1.00---------------------------------------------------------------------------------------------
...................................................TGAGTGCCGGTGCCTGCCCTGA.................................................................................................221.000.00-----------------------------------------------------------------------1.00------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCAGCAT...............................................................2311.003.00----------1.00-------------------------------------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCACCGTC..............................................................251.000.00-----------1.00------------------------------------------------------------------------------------------------------------------------
...........................CAGACAGATCATCCAGGA.............................................................................................................................1811.001.00-------------------------------------------------------------------------------------1.00----------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGAT..............................................................2411.0016.00----1.00-------------------------------------------------------------------------------------------------------------------------------
...........................CAGACAGATCATCCAGGACAATG........................................................................................................................2311.001.00---------------------------1.00--------------------------------------------------------------------------------------------------------
.........................CTCAGACAGATCATCCAGGACAATGTGG.....................................................................................................................281.000.00--------------------------------------------------------------------1.00---------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCAGAAA...............................................................2311.003.00-------------------1.00----------------------------------------------------------------------------------------------------------------
...............................................................................CCCTGCGCAGGGGCCGGGTGCTCA...................................................................2411.001.00----------1.00-------------------------------------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCATCGT...............................................................241.000.00------------1.00-----------------------------------------------------------------------------------------------------------------------
......................................................GTGCCGGTGCCTGCCCTGT.................................................................................................191.000.00------------------------------------------------------------------1.00-----------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGAAC....................................................................................................2011.002.00-------------------------------------------------------------------------------1.00----------------------------------------------------
........................................................................................................................................CAGCGAGGACGCCGGCGCCTGCA...........2311.001.00-------------------------1.00----------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGTTTT............................................................2611.0016.00------------------------1.00-----------------------------------------------------------------------------------------------------------
....................................CATCCAGGACAATGGTGAGTGCCGGTGC..........................................................................................................2811.001.00------------------------------------------------------------1.00-----------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTT....................................................................201.000.00------------------------1.00-----------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGTTT.............................................................2511.0016.00--------------------------------------------------------------------------------1.00---------------------------------------------------
......................................................................................................................................TCCAGCGAGGACGCCGGC..................1811.001.00---------------------------------------------------------------------------------1.00--------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGCTC.............................................................2511.005.00-----------1.00------------------------------------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCAT...............................................................2311.007.00-----1.00------------------------------------------------------------------------------------------------------------------------------
......................TACCTCAGACAGATCATCCAGGACA...........................................................................................................................2511.001.00-------------1.00----------------------------------------------------------------------------------------------------------------------
.....................................................................................GCAGGGGCCGGGTGCTCA...................................................................1831.001.00------------------------------------------------------------------------------------------------------------------------1.00-----------
...................................................................................................................................AGCTCCAGCGAGGACGCCGG...................2011.001.00-------------1.00----------------------------------------------------------------------------------------------------------------------
.......................................................................................AGGGGCCGGGTGCTCACCGCTAT............................................................231.000.00-------------------------------------1.00----------------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGTCA.............................................................2511.0016.00-------------------------------------------------------------------------------------------1.00----------------------------------------
..................................................GTGAGTGCCGGTGCCTGCCCTTA.................................................................................................2311.009.00---1.00--------------------------------------------------------------------------------------------------------------------------------
.........................CTCAGACAGATCATCCAGGACAAT.........................................................................................................................2411.001.001.00-----------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGCCGGTGCCTGCAAA...................................................................................................2111.001.00----------------------------------------------------------------------------------------------------------1.00-------------------------
..................................................................................TGCGCAGGGGCCGGGTGCTCACC.................................................................2311.001.00----------------------------------------------------1.00-------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCCC..................................................................201.000.00------------------------------------------1.00-----------------------------------------------------------------------------------------
....................................................................................CGCAGGGGCCGGGTGCTCACCGTT..............................................................2411.0016.00----1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................................................GCGCAGGGGCCGGGTGCTCAGA.................................................................221.000.00--------------------------1.00---------------------------------------------------------------------------------------------------------
.................................................................................CTGCGCAGGGGCCGGGTGCTCAC..................................................................2311.001.00---------------------1.00--------------------------------------------------------------------------------------------------------------
..................................................................................................................................CAGCTCCAGCGAGGACG.......................1720.500.50---------------------------------------------------------------------------------------------------------------------------------0.50--

Antisense strand
CCTGCGGAACCTCATGGCCGACTACCTCAGACAGATCATCCAGGACAATGGTGAGTGCCGGTGCCTGCCCTGGGGCCGTCCCTGCGCAGGGGCCGGGTGCTCACCGCATCTGCCCCGCAGTGGATGGGCACAGCTCCAGCGAGGACGCCGGCGCCTGCATGCACCTGGTG
..................................................(((((..(((((.(((((...(((.....)))...))))).))).))..)))))..................................................................
..................................................51.........................................................110..........................................................
SizePerfect hitTotal NormPerfect NormSRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR189782SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR189786SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR037931(GSM510469)
293GFP. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343336SRR343334SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
GSM416733(GSM416733)
HEK293. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR038855(GSM458538)
D10. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR038861(GSM458544)
MM466. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR343332(GSM796035)
KSHV (HHV8), EBV (HHV-4). (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
GSM956925Ago2(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR189784SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR343337SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
TAX577739(Rovira)
total RNA. (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR038859(GSM458542)
MM386. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR038857(GSM458540)
D20. (cell line)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR040008(GSM532893)
G727N. (cervix)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR038862(GSM458545)
MM472. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR189787GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
..................................................................................................GCTCACCGCATCTGCCCCGC.................................................... 2011.001.00------------------------------1.00-----------------------------------------------------------------------------------------------------
............................................................................................................................................GAGGACGCCGGCGCCTCTT........... 191.000.00---------------------------------------------------------------------------------------------------------------------1.00--------------
......................TACCTCAGACAGATCATTA................................................................................................................................. 191.000.00---1.00--------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................CGCCTGCATGCACCTGGC. 181.000.00---------------------1.00--------------------------------------------------------------------------------------------------------------
..................................................................................TGCGCAGGGGCCGG.......................................................................... 1450.200.20---------------------0.20--------------------------------------------------------------------------------------------------------------