ID: hsa-mir-1236
GENE: RDBP(7)
chr6:31924566-31924767-


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(5)
AGO2.ip 		(8)
B-CELL 		(5)
BRAIN 		(13)
BREAST 		(45)
CELL-LINE 		(7)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(9)
HELA 		(8)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(28)
SKIN 		(1)
TESTES 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
GAAGAAGCAAAGTAGCAGCAGCACAACCAGCCAAGGTGGTGTCAAACGCTGTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCTCTCCAGCACTATCAGAGCAGCCTGTCATGGACACAGCCACAGCAACAGAGCAGGCA
....................................................(((.((((((((((..((.(((((.........(((((((.....)))).)))))))).((((...))))........))..))))))).))).))).....................................................
..................................................51...................................................................................................152................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189782SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR189786SRR189787SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR189784RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR189783SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038861(GSM458544)
MM466. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR040031(GSM532916)
G013T. (cervix)		GSM416733(GSM416733)
HEK293. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR029126(GSM416755)
143B. (cell line)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM532889(GSM532889)
G576N. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		TAX577579(Rovira)
total RNA. (breast)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		GSM956925PAZD5TAX577453(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		DRR001483(DRX001037)
Hela long cytoplasmic cell fraction, control. (hela)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR040038(GSM532923)
G531N. (cervix)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040035(GSM532920)
G001T. (cervix)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR040008(GSM532893)
G727N. (cervix)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR040027(GSM532912)
G220T. (cervix)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
...................................................TGAGTGACAGGGGAAATGGGGA.................................................................................................................................22152.0052.0041.00---5.00-----2.00---------------------------2.00-1.00-------------------------1.00--------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGG....................................................................................................................................20141.0041.00--4.00-1.00----2.001.0010.0011.00----1.00------1.002.00----1.00-1.001.00--------------1.00----------1.00-1.00--1.00--1.00-------------------------------------------------------------------------
....................................................................................................................................TCTTCCCCTTGTCTCTCCAGT.................................................21129.008.005.00-3.00--4.00--2.00-1.00-------1.002.00-----------3.00-----------2.00------------1.00---------------------------------1.001.00-------------------------------------1.00-1.001.00--------
....................................................................................................................................TCTTCCCCTTGTCTCTCCAGA.................................................21128.008.001.00-2.00-1.006.00--1.00-1.00-------3.00----2.00----------1.00-------1.00-1.001.001.00--------1.00-------------------------------1.00-----------------1.00---1.00----------1.00-1.00------------------
...................................................TGAGTGACAGGGGAAATGGGGAT................................................................................................................................23120.0020.0015.00---1.00-----1.00------------------------1.00---------------------------------------------------------1.00--------1.00--------------------------------------
..................................................GTGAGTGACAGGGGAAATGGG...................................................................................................................................21120.0020.00--11.00-------------------------1.00------------1.00--------2.00-------1.00------------1.00-------1.00---------------------------1.00--------------------1.00------------
..................................................GTGAGTGACAGGGGAAATGGGG..................................................................................................................................22119.0019.001.00-----15.00---1.00------1.00----------------------------------1.00----------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGG..................................................................................................................................21116.0016.005.00---4.00-----1.001.00----4.00-------1.00--------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGACGG..............................................................................................................................25116.0052.00-------9.007.00------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGG...................................................................................................................................20115.0015.005.00--2.004.00-----1.00-------------1.00---------------------------1.00-----------------------------------------------1.00----------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGAA................................................................................................................................23112.0052.008.00--1.00------1.00---------------------------------------------------------------------1.00----------------------------------------------------1.00-------
..................................................GTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTC.........................................................9519.009.00-8.00-----------------------------------------------------------------------------------------------------------------------------1.00-------------
.......................................................................GATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCT.....................................................................6219.009.00-9.00-------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGA..................................................................................................................................2219.0020.00--4.00-1.00--------------2.00-------------------------------------------1.00----------------------------------------------------1.00------------------------
....................................................................................................................................TCTTCCCCTTGTCTCTCCAG..................................................2018.008.00-----7.00-------------------------------------------------------------------------------------------------------------------1.00-------------------
...................................................TGAGTGACAGGGGAAATGGGGACG...............................................................................................................................2418.0052.00-------4.003.00-----1.00------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGA.................................................................................................................................2318.008.003.00---1.001.00--------1.00--------------1.00-----------------------------------------------------------------------1.00---------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGC..................................................................................7018.008.00-8.00-------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGG....................................................................................................................................1918.008.00------------------------1.00-----1.00-------------1.001.001.00-1.00--------------------1.00-----------------------------------------------1.00-----------------------
.........................................................................TGGACTGGAAGTGGGCAGC..............................................................................................................1917.007.00---6.00-------------------------------------------------------------------------------------1.00---------------------------------------------------
...................................................TGAGTGACAGGGGAAATG.....................................................................................................................................1817.007.00---2.00-----1.00----1.00--1.00-------------------1.00---------------------------------------------1.00---------------------------------------------------------
.............................................................................................................................................................................TGGACACAGCCACAGCAACAGAGCAGG..2716.006.00-------------4.00----------------------------------------------------------------1.00-----------------------------------1.00--------------------------
..................................................................................................................................CCTCTTCCCCTTGTCTCTCCAGA.................................................2315.003.00------------------------------------------------------1.00--------------------1.00----------------------1.00------------1.00---1.00-------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCT........................................................9615.005.00-5.00-------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGA....................................................................................................................................2015.003.00--3.00------1.00----------------------------------------------------------------------------------------------------1.00------------------------------
.....................................................................GGGATGGACTGGAAGTGGGCA................................................................................................................2115.005.00---------------------------4.00----------------------------------------------1.00------------------------------------------------------------------
..................................................................................................................................CCTCTTCCCCTTGTCTCTCCAGT.................................................2314.003.00----------------------2.00-------------------------------------------------1.00----1.00---------------------------------------------------------------
...................................................TGAGTGACAGGGGAAAT......................................................................................................................................1714.004.004.00--------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAACG.....................................................................................................................................184.000.00--------------4.00------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGATAAT.............................................................................................................................2614.0020.004.00--------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATGG..............................................................................................................................2614.004.00--------------------------1.00----------------------2.00-----------------------------------------------------1.00-------------------------------------
...............................................................................................................................................................AGAGCAGCCTGTCATGGACACA.....................2213.003.00-----------------------------2.00--------------------------------------------------------------------------1.00------------------------------------
...................................................TGAGTGACAGGGGAAATGA....................................................................................................................................1913.007.00---------------------------------------2.00--------------------1.00--------------------------------------------------------------------------------
...................................................................................................................................CTCTTCCCCTTGTCTCTCCAGA.................................................223.000.00------------------1.00-------------------------------------------------1.00---------------------------------------1.00--------------------------------
..................................................GTGAGTGACAGGGGAAATAAT...................................................................................................................................2113.003.00---------------------3.00-----------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGATT...............................................................................................................................2413.0020.00---------2.00-------1.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATG...............................................................................................................................2513.003.003.00--------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATG.....................................................................................................................................1913.003.00---------2.00-----------------------1.00-----------------------------------------------------------------------------------------------------------
...................................................................................................................................CTCTTCCCCTTGTCTCTCCAGT.................................................223.000.00-------------------1.00---------------------------2.00---------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGAAA...............................................................................................................................2413.0052.00-------3.00-------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGATA...............................................................................................................................2413.0020.00---2.00-------------1.00---------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGA..................................................................................................................................2113.0015.00--1.00-------1.00------------------------------------------1.00---------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGAA..................................................................................................................................2113.008.00---3.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAAT......................................................................................................................................1813.003.00----------------------------------------------------------------------1.00-------------1.00---1.00----------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATT...............................................................................................................................2513.002.003.00--------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CCTCTTCCCCTTGTCTCTCCAG..................................................2213.003.00---------------3.00-----------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGATGGA.............................................................................................................................2612.002.00----1.00---------------1.00------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATA.....................................................................................................................................1812.004.00---2.00-----------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGATCA..............................................................................................................................2512.0020.002.00--------------------------------------------------------------------------------------------------------------------------------------------
......................................................................GGATGGACTGGAAGTGGGCA................................................................................................................2012.002.00-------------------------2.00-------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATA.....................................................................................................................................1912.003.00----------------------------------2.00----------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGT..................................................................................................................................2112.0015.00---1.00------------------1.00----------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGAT................................................................................................................................2412.002.00----1.00--------------------------------------------------------------------1.00-------------------------------------------------------------------
.................................................................................................................................................................AGCAGCCTGTCATGGACACA.....................2012.002.00--------------------------------1.00------------------1.00-----------------------------------------------------------------------------------------
.....................................................................................................................................CTTCCCCTTGTCTCTCCAT..................................................192.000.00--------------1.00-------------------------------------------------------------1.00----------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGT..................................................................................................................................2212.0020.00------1.00---------------------1.00----------------------------------------------------------------------------------------------------------------
...........................................................................GACTGGAAGTGGGCAGCATGGAGCTG.....................................................................................................2612.002.00---------2.00-----------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGATG...............................................................................................................................2412.002.00-----1.00-----------------1.00---------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGAAT...............................................................................................................................2412.0052.00---1.00--------------------------1.00--------------------------------------------------------------------------------------------------------------
.........................................................................TGGACTGGAAGTGGGCAG...............................................................................................................1821.501.50------------------------------------------------------------------------------------------------------------------------------1.00--------0.50-----
....................................................................................................................................TCTTCCCCTTGTCTCTCCAGTTT...............................................2311.008.00-----------------------------------------------------------------------------------------------1.00---------------------------------------------
..........................................................................................................................................................CTATCAGAGCAGCCTGTCAT............................2011.001.00-----------------------------------------1.00---------------------------------------------------------------------------------------------------
..................................................................................................................................CCTCTTCCCCTTGTCTCTCCA...................................................2111.001.00---------------------------------------------------------------------------------1.00-----------------------------------------------------------
..................................................................ATGGGGATGGACTGGAAGGGG...................................................................................................................211.000.00---1.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATGGACTGGA........................................................................................................................3211.001.00--------------------1.00------------------------------------------------------------------------------------------------------------------------
.......................................................................GATGGACTGGAAGTGGGCAGCA.............................................................................................................2211.001.00----------------------1.00----------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TCTTCCCCTTGTCTCTCCAGTA................................................2211.008.00--------------------------------------------------------------------------------------------------------------------------------------1.00------
......................................................................GGATGGACTGGAAGTGGGCAGCATGGAGCTGACC..................................................................................................3411.001.00---------------1.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CTCTTCCCCTTGTCTCTCCAGTA................................................231.000.00--------------------------------------------------------1.00------------------------------------------------------------------------------------
..........................................................................................................................................................................TCATGGACACAGCCACAGCAACAGAGCAG...2911.001.00-----------------------------------------------------------------1.00---------------------------------------------------------------------------
.....................................................................GGGATGGACTGGAAGTGGGC.................................................................................................................2011.001.00-------------1.00-------------------------------------------------------------------------------------------------------------------------------
.......................................................................GATGGACTGGAAGTGGGCAGC..............................................................................................................2111.001.00----1.00----------------------------------------------------------------------------------------------------------------------------------------
.....................................................................GGGATGGACTGGAAGTGGGCAGCA.............................................................................................................2411.001.00----------------------------------------------------------------------------------------------------------------------1.00----------------------
.........................................................ACAGGGGAAATGGGGATGGA.............................................................................................................................2011.001.00--------------------------------1.00------------------------------------------------------------------------------------------------------------
....................................................................................................................................TCTTCCCCTTGTCTCTCCCGTT................................................2221.001.00----------------------------------------------------------------------------------------------------------1.00----------------------------------
.........................................................................................................................................................ACTATCAGAGCAGCCTGTCATGGAC........................2511.001.00----------------------------------------------------------------------------------1.00----------------------------------------------------------
........................................................................................................................................CCCCTTGTCTCTCCAGTT................................................181.000.00----------------------------------------------------------------------------------------------1.00----------------------------------------------
...GAAGCAAAGTAGCAGCAGCACAACC..............................................................................................................................................................................2511.001.00--------------------------1.00------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................AGAGCAGCCTGTCATGGACACAG....................2311.001.00----------------1.00----------------------------------------------------------------------------------------------------------------------------
.........................................................................TGGACTGGAAGTGGGCAGCA.............................................................................................................2011.001.00----------------------------------------------------------------------------------------------------------------1.00----------------------------
....................................................................................................................................TCTTCCCCTTGTCTCTCCAT..................................................201.000.00----------------------------------------------------------------------------------------------------------------------------1.00----------------
.............................................................................................................................................................................TGGACACAGCCACAGCAACAGAGCAGT..271.000.00-------------1.00-------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................ATGGACACAGCCACAGCAACAGAGCAGGCCA311.000.00--------------------1.00------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGAAA...............................................................................................................................2511.008.00-----------------------------------1.00---------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGTAA..................................................................................................................................2111.007.00---------------------1.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................AATGCCTCTTCCCCTTGTCTCTC.....................................................2311.001.00-----------------------------------------------------------------------------------------------------------------1.00---------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATGGA.............................................................................................................................2711.001.00---------------------------------------------------1.00-----------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGAA.................................................................................................................................2211.0015.00----------------------------------------1.00----------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGAA................................................................................................................................2411.008.00----1.00----------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGAT.................................................................................................................................2311.0020.00--------------------------------------------------------------------------------------1.00------------------------------------------------------
.........................................................................TGGACTGGAAGTGGGCAGCATGGAG........................................................................................................2511.001.00---------------1.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................CTCTTCCCCTTGTCTCTCCCGA.................................................221.000.00-------------------------------------1.00-------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGT.................................................................................................................................2311.0019.00---------1.00-----------------------------------------------------------------------------------------------------------------------------------
.................GCAGCACAACCAGCCAAGGTGGTGTCAAACGCT........................................................................................................................................................3311.001.00-----------------------------------------------------------------------------------------------------------------------------1.00---------------
....................................................................................................................................TCTTCCCCTTGTCTCTCCAGTAT...............................................2311.008.00------------------------------------------1.00--------------------------------------------------------------------------------------------------
....................................................................GGGGATGGACTGGAAGTG....................................................................................................................1811.001.00----------------------------1.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................TAATGCCTCTTCCCCTTGTCTCTCCAG..................................................2711.001.00---------------------------------------------------------------------------------------------------------------------------1.00-----------------
.............................................................................................................................................................................TGGACACAGCCACAGCAACAGAGCAGGC.2811.001.00-------------1.00-------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGAGGG..............................................................................................................................2611.008.00--------1.00------------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGATGG..............................................................................................................................2511.001.00--------------------1.00------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCTCTC.....................................................9911.001.00-------------------------------------------------------------------------------------1.00-------------------------------------------------------
...................................................................................................................................CTCTTCCCCTTGTCTCTCCATT.................................................221.000.00------------------------------------------------------------------------------------------------1.00--------------------------------------------
.............................................................................................................................................................................TGGACACAGCCACAGCAACAGATTAG...261.000.00-------------1.00-------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................CTTCCCCTTGTCTCTCCAGT.................................................201.000.00---------------------------------------------------------1.00-----------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCTCTCCAG..................................................10111.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TCTTCCCCTTGTCTCTCCATA.................................................211.000.00---------------------------------------------------------------------------------------------------1.00-----------------------------------------
........................................GTCAAACGCTGTGAGTGAC...............................................................................................................................................1911.001.00-------------------------------------------------------1.00-------------------------------------------------------------------------------------
..........................................................................................................................ACATAATGCCTCTTCCCCTTGT..........................................................2211.001.00-------------------------------------------------------------------------------------------------1.00-------------------------------------------
....................................................GAGTGACAGGGGAAATGGGGAT................................................................................................................................2211.001.00---------1.00-----------------------------------------------------------------------------------------------------------------------------------
.........................................................................TGGACTGGAAGTGGGTGG...............................................................................................................181.000.00----------------------------------------------------------------------------------------------------------------------------------1.00----------
...................................................TGAGTGACAGGGGAAATGGGGATTT..............................................................................................................................2511.0020.00------------------------------------------------------1.00--------------------------------------------------------------------------------------
......................................................................GGATGGACTGGAAGTGGGCAGCATGGAGCTG.....................................................................................................3111.001.00---------------1.00-----------------------------------------------------------------------------------------------------------------------------
....................................................GAGTGACAGGGGAAATGGGGA.................................................................................................................................2111.001.00---------------------------------1.00-----------------------------------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGGATGGAC............................................................................................................................2811.001.00---1.00-----------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................CATGGACACAGCCACAGCAACAGAGCAG...2811.001.00---------------1.00-----------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TCTTCCCCTTGTCTCTCCAGC.................................................2111.001.00-----------------------1.00---------------------------------------------------------------------------------------------------------------------
.........................................................................TGGACTGGAAGTGGGCAGCATGGAGCT......................................................................................................2711.001.00---1.00-----------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................TCTTCCCCTTGTCTCTCC....................................................1821.001.00--0.50-------------------------------------------------------------------------------------------------------------------------------------0.50----
..................................................GTGAGTGACAGGGGAAATGGGGATGGACTGG.........................................................................................................................3111.001.00-------------1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGGAAG................................................................................................................................2311.0015.00----------1.00----------------------------------------------------------------------------------------------------------------------------------
........................................................................ATGGACTGGAAGTGGGCAGCATTT..........................................................................................................241.000.00--------------------------------------------------------------1.00------------------------------------------------------------------------------
..................................................GTGAGTGACAGGGGAAATGGGTT.................................................................................................................................2311.0020.00-----------------------------------------------------1.00---------------------------------------------------------------------------------------
...................................................TGAGTGACAGGGGAAATGGTAA.................................................................................................................................2211.008.00---1.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................................ATGGGGATGGACTGGAA.......................................................................................................................1750.400.40----------------------------0.20-------------------------------------------------------------------------------------------------------------0.20--
......................................................................GGATGGACTGGAAGTGG...................................................................................................................1730.330.33----------------------------------------------------------0.33----------------------------------------------------------------------------------
..........................................................................................................................................................................TCATGGACACAGCCAC................1630.330.33---------------------------------------------------------0.33-----------------------------------------------------------------------------------
.........................................................................................................................................................................................CAGCAACAGAGCAGGC.1680.120.12--------------------------------------------------------------------------------------------------------------------------------------------0.12

Antisense strand
GAAGAAGCAAAGTAGCAGCAGCACAACCAGCCAAGGTGGTGTCAAACGCTGTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCATCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCTCTCCAGCACTATCAGAGCAGCCTGTCATGGACACAGCCACAGCAACAGAGCAGGCA
....................................................(((.((((((((((..((.(((((.........(((((((.....)))).)))))))).((((...))))........))..))))))).))).))).....................................................
..................................................51...................................................................................................152................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189782SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)		SRR189786SRR189787SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR189784RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		SRR189783SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038861(GSM458544)
MM466. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR040031(GSM532916)
G013T. (cervix)		GSM416733(GSM416733)
HEK293. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR029126(GSM416755)
143B. (cell line)		DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM532889(GSM532889)
G576N. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		TAX577579(Rovira)
total RNA. (breast)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		GSM956925PAZD5TAX577453(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		DRR001483(DRX001037)
Hela long cytoplasmic cell fraction, control. (hela)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR040038(GSM532923)
G531N. (cervix)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040035(GSM532920)
G001T. (cervix)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR040008(GSM532893)
G727N. (cervix)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR040027(GSM532912)
G220T. (cervix)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
.......................................................................................................................CCAACATAATGCCTCTG.................................................................. 171.000.00------------------------------------1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................ACCTTCATCATGGCTGAC................................................................................... 181.000.00------------------------------------1.00--------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCCTTGTCTCTCCAGCACTAT............................................ 2211.001.00--------------------------------------------------------------------------------------------1.00------------------------------------------------
.....................................................................................................................................CTTCCCCTTGTCTCTCCAGCACT.............................................. 2311.001.00--------------------------1.00------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................CAGCCTGTCATGGACACAGCGT................. 221.000.00--------------------------1.00------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................GACACAGCCACAGCAA........... 1640.250.25-----------------------------------------------------------------------------------------------------------------------------------------0.25---
..................................................................................................................................................................................ACAGCCACAGCAACAG........ 1670.140.14-------------------------------------------------------------------------------------------------------------------------------------------0.14-