ID: hsa-mir-1227
GENE: PLEKHJ1(1)
chr19:2234011-2234198-


(2)
AGO1.ip
(4)
AGO2.ip
(11)
B-CELL
(4)
BRAIN
(53)
BREAST
(63)
CELL-LINE
(9)
CERVIX
(1)
FIBROBLAST
(8)
HEART
(4)
HELA
(1)
KIDNEY
(8)
LIVER
(4)
OTHER
(1)
RRP40.ip
(69)
SKIN
(1)
TESTES
(4)
UTERUS

Sense strand
AGCAGCGAGGAGCAGTGTCAGGAGTGGATGGAGGCTCTGCGTCGGGCCAGGTGGGGCCAGGCGGTGGTGGGCACTGCTGGGGTGGGCACAGCAGCCATGCAGAGCGGGCATTTGACCCCGTGCCACCCTTTTCCCCAGCTACGAGTTCATGCGGAGAAGCCTCATCTTCTACAGGAACGAAATCCGGA
...................................................(((((..(((.((((((((((((((((...((((((......))).)))..))))).....)).)))...)))))))))..)))))...................................................
..................................................51.....................................................................................138................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR189782SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR038858(GSM458541)
MEL202. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR038857(GSM458540)
D20. (cell line)
SRR189783SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
TAX577738(Rovira)
total RNA. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038854(GSM458537)
MM653. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR189787SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR040015(GSM532900)
G623T. (cervix)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR191452(GSM715562)
178genomic small RNA (size selected RNA from . (breast)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR038862(GSM458545)
MM472. (cell line)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR038859(GSM458542)
MM386. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
GSM416733(GSM416733)
HEK293. (cell line)
SRR343334SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR038856(GSM458539)
D11. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR189785SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
TAX577743(Rovira)
total RNA. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038861(GSM458544)
MM466. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR191572(GSM715682)
66genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR040030(GSM532915)
G013N. (cervix)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR191508(GSM715618)
152genomic small RNA (size selected RNA from . (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)
SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR040011(GSM532896)
G529T. (cervix)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
GSM956925F181A(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)
SRR191569(GSM715679)
54genomic small RNA (size selected RNA from t. (breast)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR040019(GSM532904)
G701T. (cervix)
SRR029129(GSM416758)
SW480. (cell line)
SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR037938(GSM510476)
293Red. (cell line)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR191501(GSM715611)
8genomic small RNA (size selected RNA from to. (breast)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR040007(GSM532892)
G601T. (cervix)
TAX577744(Rovira)
total RNA. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR040028(GSM532913)
G026N. (cervix)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
TAX577579(Rovira)
total RNA. (breast)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR343335SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)
SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
......................................................................................................................CGTGCCACCCTTTTCCCCAGA.................................................211221.0037.0031.005.005.008.00-2.007.004.002.003.002.006.002.002.004.002.004.00-1.001.003.00--3.001.001.004.002.00-1.002.002.001.002.002.005.002.00--3.003.001.001.001.002.003.003.00-2.002.001.002.00-1.002.00-1.00-----2.001.00----1.001.001.00--2.002.001.00-3.001.00-1.001.001.00---2.00--2.00-1.00-1.00-1.001.00-1.001.00-1.00-1.00--1.002.00-1.00-1.00-2.00--1.00-1.001.00-2.00-1.002.00-------1.00-1.00--1.00----1.00---1.00----1.00------1.00-----1.00--1.00---1.001.00--1.001.00---1.001.00---1.00---1.00--1.00--1.001.00--1.00-1.00---------------1.00-1.001.00-1.00------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGT.................................................211188.0037.0010.002.002.0012.00-6.00-6.009.006.004.004.003.003.002.003.003.00-3.003.004.002.002.004.002.004.00-1.003.005.002.002.00-2.001.001.002.001.00-1.00---2.001.00--1.00-1.001.002.00-2.001.002.00--3.00--1.00-2.00-3.001.00-1.001.00------2.00----------1.001.00----1.00--1.002.00----1.001.00-2.00--1.001.00-----1.00---1.00-----1.00-1.00--1.00--1.00--1.00-1.00--1.00-1.00---1.00--1.00-1.001.00-----1.00-1.00-1.00--1.00--1.001.00---1.00---1.00-------1.00-1.00-----------1.00---------1.001.00-1.00-1.00-------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAG..................................................20137.0037.002.001.0010.00-----------------------------------5.00--2.00------1.00----1.001.00--1.00---1.00-----1.001.00------1.001.00-------2.00---1.00-------------------------------2.00------------------------1.00---------1.00-1.00-----------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGTT................................................22130.0037.001.001.00-------1.00-----1.001.00-1.001.00----1.00-1.002.001.00-------1.003.00----1.00-1.00--1.00--------------1.00-1.00--------------1.00--1.00--------1.00------1.00-1.00---------------------1.00----------------------------------------------------------------1.00-----------------1.00------1.00----------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGTTT...............................................23127.0037.003.002.002.00--2.00----2.00--1.002.00-1.00--------------1.00--------1.00-----------1.00--------1.00-------1.00--------1.00----1.00--------------------------------------------1.00---------------------------------1.00----------1.00----------------1.00---1.00----------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGTA................................................22116.0037.00------6.00---1.00----------1.00-----------1.00----------------1.00----2.00------------------------------------1.00-----------------2.00--------------------------------------------------------------------------------------------------1.00-------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGAA................................................22114.0037.001.00----2.00---1.00--------1.00-------------1.00-2.00--1.00--1.00-------------------------------1.001.00-------------1.00--1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGAT................................................22111.0037.00--------------1.00-----------------1.00--------------------------------------1.00-------------1.00----------------1.00-1.00---------2.00----------1.00----------------------1.00-------1.00------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGTTA...............................................23110.0037.00-2.00----------------1.00-----1.001.00------1.00----1.00---------------------1.00-----------------------1.00---------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGTTTT..............................................2417.0037.00------------2.00---------3.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----------1.00-------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGAAA...............................................2317.0037.00-1.00----------------------1.00----------------------------------1.00---------------------1.00--------------------------1.00---------------------------------------------------------------------------------------------1.00---1.00----------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGATT...............................................2316.0037.003.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------1.00---------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGTAT...............................................2316.0037.00------------1.00-----------1.00------------------------------------------------------1.00---------------------------------------------------1.00-----------------------------------------------1.00----------------------------1.00--------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGTAA...............................................2316.0037.00-1.00-----------------------1.00--------1.00---------------1.00--------------------------------------------1.00-------------------------------------------------------------------------------------------------1.00-----------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGC.................................................2116.006.00-------------1.00-2.00-----1.00---------------------------------------------------------1.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCA...................................................1915.005.00--1.00------------------------1.00-------------1.00-------------------------1.00----1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................ATGGAGGCTCTGCGTCGGGCCAGCATC......................................................................................................................................275.000.00-----------------5.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGAATC..............................................2414.0037.00-----------------4.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAAAA................................................2214.005.004.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................CCGTGCCACCCTTTTCCCCAGA.................................................2214.001.00----3.00------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCC....................................................1814.004.00-3.00-----------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................CCGTGCCACCCTTTTCCCCAGT.................................................2213.001.00----3.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGAAT...............................................2313.0037.00-------------------1.00-----------1.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAAA.................................................2113.005.00------------------------------------------------------------1.00----------------------------------------------------------------------------------------1.00-----------------------------------------------1.00-------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAAGT................................................2213.005.002.00--------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................CCGTGCCACCCTTTTCCCCAGTT................................................2313.001.00----3.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAATT................................................2213.005.00---------------------------------------------1.00------------------2.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGTTAT..............................................2413.0037.00-3.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGGGGCCAGGCGGTGGTGGGCATAAT...............................................................................................................272.000.00----------------------------------------------1.00---------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGTCT...............................................2312.0037.00-----1.00--------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGCT................................................2212.002.00--------------------------------1.00--------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................GGCTCTGCGTCGGGCCAG..........................................................................................................................................1812.002.00--------------------------------------------------------2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................ATGCGGAGAAGCCTCATCTTCC..................222.000.00----------------------------------------------------------------------------------------------2.00--------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGAGA...............................................2312.0037.00-------------------1.00--------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTGGGGCCAGGCGGTGG.........................................................................................................................1712.002.00----------------------2.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................GTGCCACCCTTTTCCCCAGA.................................................202.000.00------------------------------------1.00--------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................GTGCCACCCTTTTCCCCAGT.................................................202.000.00----------------------------------------------------1.00-----------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCTCAG..................................................2022.000.50--1.00-----------------------------------0.50---------------------------------------------------------------------------------------0.50------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGTAG...............................................2312.0037.00---------------------------------------1.00-----------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCCGA.................................................2112.004.00--------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGTTTA..............................................2412.0037.00---------------------2.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCCGTT................................................2211.004.00------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGATA...............................................2311.0037.00------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................CCGTGCCACCCTTTTCCCCAGTAA...............................................2411.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................AGGAGTGGATGGAGGCTC.......................................................................................................................................................1811.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------
..................................CTCTGCGTCGGGCCAG..........................................................................................................................................1611.001.00------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................GTGCCACCCTTTTCCCCAGATC...............................................221.000.00----------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAAAT................................................2211.005.00---------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
.....................................................................................................................CCGTGCCACCCTTTTCCCCAG..................................................2111.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGAAC...............................................2311.0037.00--------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................GTGGGCACTGCTGGGGTGGGCA....................................................................................................2211.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------
.....CGAGGAGCAGTGTCAGGAGTGGATGG.............................................................................................................................................................2611.001.00----------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................GTGCCACCCTTTTCCCCAGTA................................................211.000.00-------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................AGGAGTGGATGGAGGCTCTGCGTCGGGCCAG..........................................................................................................................................3111.001.00------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................AGCAGCCATGCAGAGTGCC................................................................................191.000.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------
............................TGGAGGCTCTGCGTCGGGCCAGC.........................................................................................................................................231.000.00------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................TGGGCACAGCAGCCATGCAGAGC...................................................................................2311.001.00------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGTAGT..............................................2411.0037.00----------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................CATTTGACCCCGTGCCACCCTTTTCCCCAGT.................................................311.000.00-------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................GTGCCACCCTTTTCCCCAGTT................................................211.000.00--------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................GTGCCACCCTTTTCCCCACT.................................................201.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AGTTCATGCGGAGAAGCCTCA........................2111.001.00---------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................CGGAGAAGCCTCATCTTCTACAGG.............2411.001.00-----------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................CCGTGCCACCCTTTTCCCCAGATT...............................................2411.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCATTAA...............................................2311.005.00----------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGCAC...............................................2311.006.00--------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
..................................................GTGGGGCCAGGCGGTGGG........................................................................................................................1811.002.00-------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAAAG................................................2211.005.00------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................CCGTGCCACCCTTTTCCCC....................................................1911.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................CAGAGCGGGCATTTGTTT.......................................................................181.000.00------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................GGCTCTGCGTCGGGCCAGCT........................................................................................................................................2011.002.00--------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------
........GGAGCAGTGTCAGGAGTGGATGGAGGCTCTGC....................................................................................................................................................3211.001.00------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................GCTCTGCGTCGGGCCAG..........................................................................................................................................1711.001.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................GTGCCACCCTTTTCCCCAGAT................................................211.000.00---------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCCTCG................................................2211.004.00---------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGGTT...............................................2311.0037.00------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
....................GGAGTGGATGGAGGCTCTGCGTCGGG..............................................................................................................................................2611.001.00----------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
........................TGGATGGAGGCTCTGCGTCGGGCCAG..........................................................................................................................................2611.001.00------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................CCGTGCCACCCTTTTCCCCAGTTA...............................................2411.001.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................GTGCCACCCTTTTCCCCAGTTT...............................................221.000.00-----------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................GGAGTGGATGGAGGCTCT......................................................................................................................................................1811.001.00----------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................GGAGTGGATGGAGGCTCTGCGTC.................................................................................................................................................2311.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------
...........................................................................................................................................TACGAGTTCATGCGGAGAAGCCTCATC......................2711.001.00-------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
.......AGGAGCAGTGTCAGGAGTGG.................................................................................................................................................................2011.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------
.......AGGAGCAGTGTCAGGAGTGGA................................................................................................................................................................2111.001.00---------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AGTTCATGCGGAGAAGCC...........................1811.001.00----------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCC...................................................1911.004.00----------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
................GTCAGGAGTGGATGGAGGC.........................................................................................................................................................1911.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
..................CAGGAGTGGATGGAGGCTC.......................................................................................................................................................1911.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCCGT.................................................2111.004.00------------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------
.............................................................................................................................................................AGCCTCATCTTCTACAGGA............1911.001.00------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGAAAT..............................................2411.0037.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............CAGTGTCAGGAGTGGATGGAG...........................................................................................................................................................2111.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCATA.................................................2111.005.00--------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGAGC...............................................2311.0037.00---------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGAC................................................2211.0037.00-------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................CCGTGCCACCCTTTTCCCCAGAT................................................2311.001.00-------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCTGT.................................................2111.004.00------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCCCCAGAG................................................2211.0037.00------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGTGCCACCCTTTTCC......................................................1620.500.50-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------0.50-----------------------
.......................GTGGATGGAGGCTCTGC....................................................................................................................................................1740.500.50----------------------------------------------------------------------------------0.25-------------------------------------------------------------------------------------------------------------------------------------------------0.25------------------
......................................................................................................................CGTGCCACCCTTTTCCTCAT..................................................2020.500.50--0.50----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................TGGAGGCTCTGCGTC.................................................................................................................................................1550.200.20------------0.20------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
AGCAGCGAGGAGCAGTGTCAGGAGTGGATGGAGGCTCTGCGTCGGGCCAGGTGGGGCCAGGCGGTGGTGGGCACTGCTGGGGTGGGCACAGCAGCCATGCAGAGCGGGCATTTGACCCCGTGCCACCCTTTTCCCCAGCTACGAGTTCATGCGGAGAAGCCTCATCTTCTACAGGAACGAAATCCGGA
...................................................(((((..(((.((((((((((((((((...((((((......))).)))..))))).....)).)))...)))))))))..)))))...................................................
..................................................51.....................................................................................138................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR189782SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR314796(SRX084354)
Total RNA, fractionated (15-30nt). (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR038858(GSM458541)
MEL202. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR038857(GSM458540)
D20. (cell line)
SRR189783SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
TAX577738(Rovira)
total RNA. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038854(GSM458537)
MM653. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR189787SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR040015(GSM532900)
G623T. (cervix)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR191452(GSM715562)
178genomic small RNA (size selected RNA from . (breast)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR038862(GSM458545)
MM472. (cell line)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR038859(GSM458542)
MM386. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
GSM416733(GSM416733)
HEK293. (cell line)
SRR343334SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR038856(GSM458539)
D11. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR189785SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
TAX577743(Rovira)
total RNA. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038861(GSM458544)
MM466. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR040010(GSM532895)
G529N. (cervix)
SRR191572(GSM715682)
66genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR015358(GSM380323)
Naïve B Cell (Naive39). (B cell)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR040030(GSM532915)
G013N. (cervix)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR191508(GSM715618)
152genomic small RNA (size selected RNA from . (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)
SRR191618(GSM715728)
148genomic small RNA (size selected RNA from . (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR040011(GSM532896)
G529T. (cervix)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
GSM956925F181A(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)
SRR191569(GSM715679)
54genomic small RNA (size selected RNA from t. (breast)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR040019(GSM532904)
G701T. (cervix)
SRR029129(GSM416758)
SW480. (cell line)
SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR037938(GSM510476)
293Red. (cell line)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR191501(GSM715611)
8genomic small RNA (size selected RNA from to. (breast)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR040007(GSM532892)
G601T. (cervix)
TAX577744(Rovira)
total RNA. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR040028(GSM532913)
G026N. (cervix)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
TAX577579(Rovira)
total RNA. (breast)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR343335SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)
SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
..............GTGTCAGGAGTGGATCA............................................................................................................................................................. 1711.170.00------------0.17------0.330.170.17-----0.330.17----------0.330.17--0.170.170.17------------0.330.170.170.17------------------0.330.33-0.170.17------------------------------------------0.330.330.330.170.170.170.17--0.170.170.170.170.170.17---------------------------------------------------------------------------------0.330.500.33-0.33-0.170.170.170.170.170.170.170.170.170.170.170.170.170.17-0.170.170.17
..............................................................................................................................................................GCCTCATCTTCTACAGGAACG......... 2112.002.00--------------------------2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................CCTCATCTTCTACAGGAA........... 181.000.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------
..............................................................................................................................................................GCCTCATCTTCTACAGGA............ 1811.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
........GGAGCAGTGTCAGGAGTGGATG.............................................................................................................................................................. 2211.001.00------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................AGCCTCATCTTCTACAGGA............ 1911.001.00---------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................CCTCATCTTCTACAGGAACGAAATCCGA. 281.000.00-----------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................AGAAGCCTCATCTTCTACAGGAAC.......... 2411.001.00-----------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CCTTTTCCCCAGCTACGAGTTCA....................................... 2311.001.00------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CATGCGGAGAAGCCTCATCTTCTACAGGAACGAAAT..... 3611.001.00----------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................CCCCAGCTACGAGTTCATGCGGAGAAG............................. 2711.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................TGGATGGAGGCTCTGCGTCGGGC............................................................................................................................................. 2311.001.00--------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................CAGCCATGCAGAGCGA................................................................................. 161.000.00-----------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................GCCACCCTTTTCCCCAGCTTGT............................................. 221.000.00----------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............AGTGTCAGGAGTGGAA............................................................................................................................................................... 161.000.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------------
..................................................................................................................................................................CATCTTCTACAGGAACGAAA...... 2011.001.00-------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GAGTTCATGCGGAGATG............................. 171.000.00-------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................TCATCTTCTACAGGAACGAAA...... 2111.001.00---------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GCTACGAGTTCATG..................................... 1430.670.67------------------------------------------------------------------------------------------------------------------------------0.33---------------------------------------------------------------------------------------------------0.33--------------------
.................................................................................GTGGGCACAGCAGCCAT.......................................................................................... 1720.500.50---------------------------------------------------------0.50---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............GTGTCAGGAGTGGATCAAA........................................................................................................................................................... 190.330.00--------------------------------------------------------------------------------------------------------------------------------------0.17------------------------------------------------------------------------------------------------------------0.17---
..............GTGTCAGGAGTGGAT............................................................................................................................................................... 1560.170.17-----0.17-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............GTGTCAGGAGTGGATCAA............................................................................................................................................................ 180.170.00---------------------------------------------------------------------------------------------------------------------------------------0.17---------------------------------------------------------------------------------------------------------------