dme-mir-4986
Changes
| Species | Chrom | Pos | Ref base | Type | A | C | G | T | RNAseq Total | A | C | G | T | Trace Total | Decision | Partition |
| droGri2 | scaffold_15110 | 4482489 | C | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0.083 | 0.917 | 0 | 12 | Genomic Error | miR |
| droSim1 | chr3L | 9107381 | T | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0.778 | 0 | 0.222 | 9 | Genomic Error | miR |
| droSim1 | chr3L | 9107460 | T | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.667 | 0.333 | 9 | Genomic Error | 5' flanking region |
Corrected alignment
| Species | Coordinate | Alignment |
|---|---|---|
| dm3 | chr3L:9726743-9726895 - | AGACTGCCAACTGGGTTC------TGCCGCTT---TTGCTGTGGCTTCTCTGCATGGGATTCCCCATTCTGCATGGCGCCGATCTCTGCCAGCCCATCGGATGGCGGAACTTCCAGTGCAGCGAGGTCGCTTCTCTGCAGGATCTGGTGGACTTGGGCG---------CCG |
| droSim1 | chr3L:9107366-9107518 - | CAACTGCCAACTGGGTTC------TGCCGCTT---TTGCTGTGGCTTCTCTGCGTGGGATTCCCCATCCTGCATGGCGCCGATCTCTGCCAGCCCATCGGCTGGCGGAACTTCCAGTGCAACGAAGTCGCCTCGCTGCAGGATCTGGTGGATTTGGGCG---------CCG |
| droSec1 | super_0:1960228-1960380 - | CAACTGCCAACTGGGTTC------TGTCGCTT---TTGCTGTGCCTTCTCTGCGTGGGATTCCCCATCCTGCATGGCGCCGATCTCTGCCAGCCCATCGGCTGGCGCAACTTCCAGTGCAACGAAGTCGCCTCGCTGCAGGATCTGGTGGACCTGGGCG---------CCG |
| droYak2 | chr3L:9698225-9698377 - | CAACTGCCAATTGGGTTC------TGCCGCTT---TTTCTGTGGCTTCTCTGCGCGGGATTCCCCAGCCTGCATGGTGCCGATCTCTGCCAGCCCATCGGCTGGCGGAACTTCCAGTGCAACGAGGTCGCTTCTCTGCAGGATCTGGTCGAATTGGGCG---------CCG |
| droEre2 | scaffold_4784:9713780-9713932 - | CAACTGCCAATTGGGTTC------TGCCGCTC---TTTCTGTGCCTTCTCTGCGCGGGATTCCCCAGCCTGCATGGAGCTGATCTCTGCCAGCCCGTCGGGTGGCGGAACTTCCAGTGCAACGAGGTCGCTTCTCTGCAGGATCTGGTCGACCTGGGCG---------CCG |
| droAna3 | scaffold_13337:3652327-3652482 + | TGCCAGTCAAATGGACTC------TGTTGCCTTGCTTTTTGTGGCTCTTCTCGAAGGGGCTTCCCTCCACAAGAGCTCAAGATCTTTGCCAGCCCCGAGGTTGGCGCAACTTCGAGTGCCTTGAAGTGGCTTCTCTGCAGGATCTAGTGGATTTGGGGG---------CCG |
| dp4 | chrXR_group6:9932877-9933023 + | TGAATGCCAATTGGGTTT------TGTCC------GCTCTGTGGCTCTGCTGCAGGGGCTTCCCCC---AGGTCGGGGCTCTTCCCTGCCGGACTCTGGCCTGGCGCAGCTTCGAGTGTCGTGAATTAGCCAGTCTGCAGGATCTGTCTGATGTGGGGG---------CCG |
| droPer1 | super_61:212952-213098 + | TGAATGCCAATTGGGTTT------TGTCC------GCTCTGTGGCTCTGCTGCAGGGGCTTCCCCC---AGGTCGGGGCTCTTCCCTGCCGGACTCTGGCCTGGCGCAGCTTCGAGTGTCGTGAATTAGCCAGTCTGCAGGATCTGTCTGATGTGGGGG---------CCG |
| droWil1 | scaffold_180949:1195301-1195459 + | CGAATTTCCAGTGGTTTT------GGCCGTTG---GCTTTATGGCTTGTATGTCGGTGCTTCCCGC---GGTGCACAGCTCAAGTCTGTAATCCCCGCGGCTGGCGTAACTACGAATGCAGCGAATTGGCTAGTCTAGAGGATTTAATAAATTCTGAAGGCTTGTCCACTG |
| droVir3 | scaffold_13049:8736379-8736540 + | CGAATGCCAAACAGTTCTGGACTTGG---TCA---GTTCTCTGGCTGCTCTGCTGGGCTGTGCCCC---GTGCGTTGGCGCAGTTGTGCGAGGCGCAGGGCTGGCGCAGCTTTGAGTGCCGCGAGCTGGGCAGCCTGCAGGAGCTGATCAATGAGAAGGCCTTGCCCACTG |
| droMoj3 | scaffold_6680:6608267-6608428 - | TGAATGCGCAACCTTTGCGCCTAGGT---CCA---GTCCTCTGGCTGCTGTGCTGCGGCCTTTCCC---AGGTGCTGAGTCAGATATGCGAGGCTCAAGGCTGGCGCAGCTTCGAGTGTCGTGAGCTGAGCAGCCTGAAGGAGCTGAAGAACGTTAGGAACTTTCCCAAAG |
| droGri2 | scaffold_15110:4482444-4482593 + | TGTTCTACACTTGG---------------CCA---ATTCTTTGCCTGCTCTGCTTTGGGTTTTGC--CCTGGAT-TGGCTGTGGTCTGTGAGGCTCAAGGCTGGCGTAGTTTTGAGTGCCGCGAATTGAGCAGCCTGCAGGAGCTGATCGATGTGAAGGCATTTCCCACCG |