dme-mir-4967

Changes

Species Chrom Pos Ref base Type A C G T RNAseq Total A C G T Trace Total Decision Partition
droSim1 chr2R 4528992 T 3 0 0 0 0 0 0.091 0 0.455 0.455 11 Genomic Error 5' flanking region

Corrected alignment

dme-mir-4967

Species Coordinate Alignment
dm3 chr2R:5899582-5899719 - CATAGATATGGC--TAACTATAGCGTTGTCTCTTGCGCAAATTGCATTTTC---------TCTCTGTTAACATGTACACATAATTCCTGTAACAAAGGGCATTT-----GCAA--TGTGTGAGTCAGCAAA--CCGCATCCGCTTCCCGGC-CCCTCCT
droSim1 chr2R:4528976-4529111 - CGAGGAAATAGC--TAACTATAGCGTTCTCTCTTGCGCAAATTGCATTTTC---------TCTCTGTAAACATGTACACATAATTCCTGTAACAAAGGGCATTT-----GCAA--TGTGTGAGTCAGCAAA--CCGCATCCGCCCC-C--CGCCCTCCC
droSec1 super_1:3512309-3512447 - CGAGGAAATATCTTTAACTATAGCGTTCTCTCTTGCGCAAATTGCATTTCC---------TCTCTGTAAACATGTACACATAATTCCTGTAACAAAGGGCATTT-----GCAA--TGTGTGAGTCAGCAAA--CCGCATCCGCCCCTC--TGCCCTCCT
droYak2 chr2L:18527608-18527740 - CGGGAAACTCG-----ACTATAGCGTTCTCTCTTGTTTAAATTGTATTTTC---------TCTCTGTTAAAATGTACACATAATTCCTATTTCAAAGGGCTTTG-----GAAA--AGTGTGAGTCAGCAAA--CCGCATCCGCCCG-A--TTTCTTCCT
droEre2 scaffold_4929:8470755-8470887 + CGGTAAATTCG-----ACTAAAGCGTTCTCTCTTGCTTAAATTGTATTTTC---------TCTCTGTTAACATGTATACATATTTCCTGTAACAAAGGCCATTG-----GAAA--TGTGTGAGTCAGCAAA--CCGCATCCGCCCC-C--TTTCTTCCT
droAna3 scaffold_13266:17255662-17255760 + TGCTATA-TATCTGTACCTATA----------------------------------------------TGTATGTACGGGTG-TTTATGTAACAAAAGGCATTTTGGTGGAAA--TGCGTGAGTCAGCGGA--CCGCATTAT-------GC-CCTTTGT
dp4 chr3:6114287-6114365 - C-------------------------------------------------------------TCCATCCATATGTAC--------TTTATAACAAAGGGCATTT-----GGAATATGTGTGAGTCAGCACATGCCGCATCCGTG-----GC-CCCTTCC
droPer1 super_2:6317550-6317666 - TTTTGACA--GC-----TTTAAGCGTTCC----------------ATTTCCATTCACGAACCTCCATCCATATGTAC--------TTTATAACAAAGGGCATTT-----GGAATATGTGTGAGTCAGCACATGCCGCATCCGTG-----GC-CCCTTCC
droWil1 scaffold_180700:5327370-5327375 - CCC---------------------------------------------------------------------------------------------------------------------------------------------------------TTT
droVir3 scaffold_12875:417241-417243 - CCT------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:5073155-5073192 + GAGACACTTA-------------------------------------------------------------------------------------ACTCCGTTC-----ACCT--TGTGCGA----------------------------C-TCCCTAA
droGri2 Unknown ---------------------------------------------------------------------------------------------------------------------------------------------------------------