dme-mir-3641
Changes
| Species | Chrom | Pos | Ref base | Type | A | C | G | T | RNAseq Total | A | C | G | T | Trace Total | Decision | Partition |
| droSim1 | chrX | 1441510 | T | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0.7 | 0 | 0.3 | 10 | Genomic Error | miR* |
Corrected alignment
| Species | Coordinate | Alignment |
|---|---|---|
| dm3 | chrX:2065104-2065202 + | GGCGAACTTTTTAATGTGAGTGTCCTGTTT------------ACAGCTGGTATATTTT---------TCGAAA---AGCC----------CTCTAAAC---------TGG------------T---CACTTCCAC-TCTACAGATCTATAACTACATA |
| droSim1 | chrX:1441441-1441539 + | GGCGAACTGTTCAATGTGAGTTTCCTACTT------------ACAGCTGGTATATTTC---------TCGAAC---AGTC----------CTCTAAAC---------TGG------------T---CCCTTCCGC-TCCGCAGATCTACAACTACATA |
| droSec1 | super_10:1848730-1848828 + | GGCGAACTGTTCAATGTGAGTTTCCTACTT------------ACAGCTGGTATATTTC---------GCGAAC---AGTC----------CTCTAAAC---------TGG------------T---CCCTTCCGC-TCCGCAGATCTACAACTACATA |
| droYak2 | chrX:6259202-6259289 - | GGCGAACTCTTCAATGTGAGTTTCCTATGT------------TTCGCATGTACATAT---------------------------------ATCTAAAT---------TGG------------T---TCCTTCTCC-TCTGCAGATCTACAACTACATA |
| droEre2 | scaffold_4644:2028284-2028382 + | GGCGAACTGTTCAATGTGAGTATCCTGTGA------------TCCGCTTGTACTTATC---------TCGAGC---AGTT----------CTCTAAAC---------TGG------------T---CCCTGATCC-TCTGCAGATCTACAACTACATA |
| droAna3 | scaffold_13117:1070684-1070773 - | GGCGAGCTCTTCAACGTAAGTTTCCCCGCT------------TAAAC------------GCCTAAGA-----T----TTT----------CCCTAAAC---------CGT------------T---GCTGTTCTG-TCTCTAGATCTACAACTATATC |
| dp4 | chrXL_group1e:3790116-3790235 - | GGCGAGTTGTTCAACGTAAGTTCCAGCATT------------TCAGCCT---------CGAATTCGG-----C---AGTCACTTGATAC---------TCTCCCACCTCCCTCTCCCTCTGCCTCTCCATCATCCTCTTCCAGATCTACAACTACATC |
| droPer1 | super_17:723995-724114 - | GGCGAGTTGTTCAACGTAAGTTCCAGCATT------------TCAGCCT---------CGAATTCGG-----C---AGTCACTTAATAC---------TCTCCCACCTCCCTCTCCCTCTGCCTCTCCATCATCCTCTTCCAGATCTACAACTACATC |
| droWil1 | scaffold_181096:7421152-7421244 - | GGCGAGCTTTTCAACGTGAGTTACTCAGTC------------CA----A---------AGAAACTGG-----TTTTAGTTA--TGAT-----------TAACTC-----A------------C----TTTTTTTT-GTTATAGATTTACAACTATATA |
| droVir3 | scaffold_12928:7113520-7113613 + | GGCGAGTTGTTCAACGTAAGTCGATGACCTCGCG--------T------------------ATGTGGGCGTAC---TTTC----------A------CTGACGC---CTG------------C---CTCTTTGTC-TATTCAGATTTACAACTACATT |
| droMoj3 | scaffold_6328:2787435-2787524 + | GGGGAGTTGTTCAACGTAAATTCT--ATTC------------TCACTTAACACA----AGAATCAAA-----T----CTC---------------ATC---------TAA------------T---T-TTTCGCT-CGTTTAGATTTACAACTACATT |
| droGri2 | scaffold_14853:3491672-3491772 - | GGAGAGTTGTTTAATGTAAGCTAA--ACTTCGCCCATCCTCTCCAGCTG-----------------------------TT---TGGTTAACTTTCAAC---------TGT------------TTGTC-CTCCATC-TCCTCAGATTTACAACTACATT |