dme-mir-318
| Species | Chrom | Pos | Ref base | Type | A | C | G | T | RNAseq Total | A | C | G | T | Trace Total | Decision | Partition |
| droSim1 | chr3R | 15159188 | A | 3 | 0 | 0 | 0 | 0 | 0 | 0.4 | 0 | 0.6 | 0 | 20 | Genomic Error | Loop |

Corrected Alignment
| Species | Coordinate | Alignment |
|---|---|---|
| dm3 | chr3R:6234009-6234106 + | G-------TCCTT--CGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACAC-T--TCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA |
| droSim1 | chr3R:15159142-15159239 - | G-------TCCTT--CGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACAC-T--TCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA |
| droSec1 | super_0:15709308-15709405 - | G-------TCCTT--CGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACAC-T--TCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTATTCA |
| droYak2 | chr3R:10262524-10262621 + | G-------TCCTC--CGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCGCAC-T--ACAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTGTTCA |
| droEre2 | scaffold_4770:15383893-15383990 - | G-------TCCTC--CGGTTTCAGTTTATGGGATACACACAGTTCAGTTTTGTCACAC-T--TCAAGCATCACTGGGCTTTGTTTATCTCATGAGAGCGAAATTTGTTCA |
| droAna3 | scaffold_13340:867198-867296 - | G-------TCCTC--CGGTTTCAATTTGTGGGATACACACGGTTCAGTTGTGTCACTTTT--GCGAGCATCACTGGGCTTTGTTTATCTCATAAGACTGAAATTTGTTCA |
| dp4 | chr2:7233334-7233438 - | CGTGTGCCTCTTT--TGGTTTCAATTTATGGGATGCACCAAGTTCAGTTTTGTCACAT-T--TCGAGCATCACTGGGCTTTGTTTATCTCATAAGAGCGAAATTGATTCA |
| droPer1 | super_0:1094016-1094113 - | C-------TCTTT--TGGTTTCAATTTATGGGATGCACCAAGTTCAGTTTTGTCACAT-T--TCGAGCATCACTGGGCTTTGTTTATCTCATAAGAGCGAAATTGATTCA |
| droWil1 | scaffold_181108:652-751 + | G-------TCAGA--CGGTTTCAATTTATGGGATACACCAAGTTCAGTTTTGTCGCAT-TCCACGAGCATCACTGGGCTTTGTTTATCTCATAAAGGAGAAATGAATACA |
| droVir3 | scaffold_13047:1194317-1194415 + | T-------GATTT--GGATTTCAATTTATGGGATACACCAAGTTCAGTTTTGTCAGATGT--CCAAGCATCACTGGGCTTTGTTTATCTCATAAGAGTGAAATTTGTTCA |
| droMoj3 | scaffold_6540:5225327-5225427 + | G-------TGATTAAGGATTTCAATTTATGGGATACACTAAGTTCAGTTTTGTCAGATGT--CCAAGCATCACTGGGCTTTGTTTATCTCATAAGAGCGAAATTTGTTCA |
| droGri2 | scaffold_14906:5077291-5077389 - | G-------ATTTC--GGATTTCAATTTATGGGATACACCAAGTTCAGTTTTGTCAGATGT--CCAAGCATCACTGGGCTTTGTTTATCTCATAAGAGCGAAATTAGTTCA |