dme-mir-307b
Changes
| Species | Chrom | Pos | Ref base | Type | A | C | G | T | RNAseq Total | A | C | G | T | Trace Total | Decision | Partition |
| droSim1 | chr2R | 4140604 | T | 3 | 0 | 0 | 0 | 0 | 0 | 0.688 | 0 | 0 | 0.313 | 16 | Genomic Error | 5' MOR |
| droSim1 | chr2R | 4140613 | T | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0.688 | 0 | 0.313 | 16 | Genomic Error | 5' MOR |
| droSim1 | chr2R | 4140738 | T | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0.75 | 0 | 0.25 | 20 | Genomic Error | 3' MOR |
Corrected Alignment
| Species | Coordinate | Alignment |
|---|---|---|
| dm3 | chr2R:5508724-5508873 + | TT--------CACTGGTGCCAGTTAGTTTCGTGGATACTCTGTCCTGCTATCGCTCACTCAAGGAGGTTGTGATGGATACCATATCG-AAATAACATCACACCCAGGTTGAGTGAGTCAAAGCAAGACAAAAT-GCTGC--TAACTTTGCA-------------------------TCGGTTTCACT- |
| droSim1 | chr2R:4140592-4140741 + | TT--------CACTGGTGCCAGTTAGCTTCGTGGATACTCTGTCCTGCTATCGCTCACTCAAGGAGGTTGTGATGGATACCATATCG-AAATAACATCACACCCAGGTTGAGTGAGTCAAAGCAAGACAAAAT-GCTGC--TAACTTTGCA-------------------------TCGGTTTCACT- |
| droSec1 | super_1:3126024-3126173 + | TA--------CACTGGTGCCAGTTAGCTTCGTGGATACTCTGTCCTGCTATCGCTCACTCAAGGAGGTTGTGATGGATACCATATCG-AAATAACATCACACCCAGGTTGAGTGAGTCAAAGCAAGACAAAAT-GCTGC--TAACTTTGCA-------------------------TCGGTTTCACT- |
| droYak2 | chr2L:18140614-18140763 + | CT--------CACTGGTGCCAGTTAGTTTCGTGGATACTCTGTCCTGCTATCGCTCACTCAAGGAGGTTGTGATGGATACCATATCG-AAATAACATCACACCCAGGTTGAGTGAGTCAAAGCAAGACAAAAT-GCTGC--TAACTTTGCA-------------------------TCGGTTTCACT- |
| droEre2 | scaffold_4929:8848853-8848999 - | TA--------TTTTG----TAGTTAGTTTCGTGGATACTCTGTCCTGCTATCGCTCACTCAAGGAGGTTGTGATGGATACCATATCG-AAATAACATCACACCCAGGTTGAGTGAGTCAAAGCAAGACAAAAT-GCTGC--TAACTTTGCA-------------------------TCGGCTTCACTT |
| droAna3 | scaffold_13266:12795452-12795608 + | TTAA------CATT----CTAGTTAGTCTTGTGGATACTCTGTCCTGCTATCGCTCACTCAAGGAGGTTGTGATGGATACCATATCG-AAATAACATCACACCCAGGTTGAGTGAGTCAAAGCAAGACAAAAAGGCTGC--TAACTTTC----------------GTTTCGGAT--TGGGGTTCACTG |
| dp4 | chr3:14135673-14135829 + | TA--------TTCTTTTGTCCG---GCTTTGTGGATATTCTATCCTGCTATCGCTCACTCAAGGAGGTTGTGATGGATACCATATCG-AAATAACATCACACCCAGGTTGAGTGAGTCAAAGCAAGACAAAAT-GCGACCCGAACTTTTTCTCAGTTTTCA-----------------GTTTTCACT- |
| droPer1 | super_4:1183038-1183202 - | TGAATCACTATTCTGTTGTCCG---GCTTTGTGGATATTCTATCCTGCTATCGCTCACTCAAGGAGGTTGTGATGGATACCATATCG-AAATAACATCACACCCAGGTTGAGTGAGTCAAAGCAAGACAAAAT-GCGACCCGAACTTTTTCTCAGTTTTCA-----------------GTTTTCACT- |
| droWil1 | scaffold_180701:3433631-3433773 + | GTAATAAAT---C---TTTCATTGAACTTTGTGGATATTCTATCCTGCTATCGCTCACTCAAGGAGGTTGTGATGGATACCATATTATAAATAACATCACACCCAGGTTGAGTGAGTCAAAGCAAGGCAAAAT-GT-GT--TAAG----------------------------------TTCTATAA- |
| droVir3 | scaffold_12875:5789437-5789575 + | ---------------------GTTGGCTTAGTGGATACTCTATCCTGCTATCGCTCACTCAAGGAGGTTGTGATGGATACCAAATCG-AACTAACATCACACCCAGGTTGAGTGAGTCAAAGCAAGACAAAAT-GTT----------------------CGGTTTATTTT---GTCACTTTTGCACT- |
| droMoj3 | scaffold_6496:24271651-24271794 - | TC--------TATTGGT-----TTAGCTTTGTGGATATTCTATCCTGCTATCGCTCACTCAAGGAGGTTGTGATGGATACCGAATCG-AAATAACATCACACCCAGGTTGAGTGAGTCAAAGCAAGACAAAAT-TCT----TAGTTTT-----------CT--------T---G--TTGTTTTTATT- |
| droGri2 | scaffold_15112:722926-723081 + | TC--------GCCTGTCGCCTGTTTTC-TTGTGGATATTCTATCCTGCTATCGCTCACTCAAGGAGGTTGTGATGGATACCAAATCG-AAATAACATCACACCCAGGTTGAGTGAGTCAAAGCAAGACAAAAT-GTT---------------TAGTTCTT---TTATTTTTATT--TAATTTTTTCT- |