dme-mir-305

dme-mir-305

This miRNA is clustered with dme-mir-275
Changes

Species

Chrom

Pos

Ref base

Type

A

C

G

T

RNAseq Total

A

C

G

T

Trace Total

Decision

Partition

droSim1

chr2L

7217594

C

2

0

0.006

0

0.994

160

0

0.9

0

0.1

10

Genomic Error

miR*

Corrected Alignment

dme-mir-305

Species	Coordinate	Alignment
dm3	chr2L:7425957-7426059 +	GTAT--------CAAC-----------------------------------TGTCTCCCATGTCTATTGTACTTCATCAGGTGCTCTGGTGTGTC-TCGTAACCCGGCACATGTTGAAGTACACTCAATATGAGGCGATTTGCAT----------------AC
droSim1	chr2L:7217527-7217627 +	GTAT--------CA-C-----------------------------------TGTCTCCCATGTCTATTGTACTTCATCAGGTGCTCTGGTGTGTC-TCGTAACCCGGCACATGTTGAAGTACACTCAATATGAGGCGATTTGCAT----------------AC
droSec1	super_3:2941418-2941520 +	GTAT--------CAAC-----------------------------------TGTCTCCCATGTCTATTGTACTTCATCAGGTGCTCTGGTGTGTC-TCGTAACCCGGCACATGTTGAAGTACACTCAATATGAGGCGATTTGCAT----------------AC
droYak2	chr2L:5473614-5473716 -	GTAT--------CAAC-----------------------------------TGTCTCCCATGTCTATTGTACTTCATCAGGTGCTCTGGTGTGGC-CCGTAACCCGGCACATGTTGAAGTACACTCAATATGAGGCGATTTGCAT----------------AC
droEre2	scaffold_4929:16344683-16344785 +	GTAT--------CAAC-----------------------------------TGTCTCCCATGTCTATTGTACTTCATCAGGTGCTCTGGTGTGGT-CCGTAACCCGGCACATGTTGAAGTACACTCAATATGAGGCGATTTGCAT----------------AC
droAna3	scaffold_12916:15334141-15334251 +	GTATTTTTGAGAAATA-----------------------------------TGTCTCCCATGTCTATTGTACTTCATCAGGTGCTCTGGTGTCCA-CCGTAACCCGGCACATGTTGAAGTACACTCAATATGAGGCGAATGTCAA----------------AC
dp4	chr4_group1:4175881-4175974 +	G----------------------------------------------------TCTCCCATGTCTATTGTACTTCATCAGGTGCTCTGGTGTGTC-CTGTAACCCGGCACATGTTGAAGTACACTCAATATGTGGCGAAGTTCGT----------------GC
droPer1	super_5:1086315-1086408 -	G----------------------------------------------------TCTCCCATGTCTATTGTACTTCATCAGGTGCTCTGGTGTGTC-CTGTAACCCGGCACATGTTGAAGTACACTCAATATGTGGCGAAGTTCGT----------------GC
droWil1	scaffold_180772:5257378-5257513 -	GATT--------CT-CTTTTTTTTTTATTGGCATTTTTAATTTATTGTTGTTGTCTCCCATGTCTATTGTACTTCATCAGGTGCTCTGGTGTCCGTTTGTAACCCGGCACATGTTGAAGTACACTCAATATGTGGCGATCTTCAT------------------
droVir3	scaffold_12963:15419827-15419927 -	GTTT--------CA-------------------------------------TGTCTCCCATGTCTATTGTACTTCATCAGGTGCTCTGGTGTGAC-TTGTAACCCGGCACATGTTGAAGTACACTCAATATGCGTTGATTTGCAT----------------TT
droMoj3	scaffold_6500:18399247-18399346 -	GTGT--------C----------------------------------------TCCCCCATGTCTATTGTACTTCATCAGGTGCTCTGGTGTCAG-TGGAAACCCGGCACATGTTGAAGTACACTCAATATGCGGTGATTTGCAGTT--------------GC
droGri2	scaffold_15126:5008540-5008648 +	------------------------------------------------------CTCCCATGTCTATTGTACTTCATCAGGTGCTCTGGTGTCAC-TCGTAACCCGGCACATGTTGAAGTACACTCAATATGCGGTGATTGGCATTTGCTGCGTTTTAATTAA