dme-mir-3

This miRNA belongs to a cluster which includes dme-mir-309, dme-mir-3, dme-mir-286, dme-mir-4, dme-mir-5, dme-mir-6-1 - 6-3.
No changes
- Multiple substitutions in the miR* region of D. yakuba through D. grimshawi are supported by the majoirty or all the sRNAseq or trace reads.

dme-mir-3

Species	Coordinate	Alignment
dm3	chr2R:15549085-15549183 -	GCCA-C------------CTAA-GGTCCCGATCCTGGGATGCATCTTGTGCAGTTATGTTTC--AAT-------CT----CACATCACTGGGCAAAGTGTGTCTCAAGATCCTGGCCACATCG--------------TCG
droSim1	chr2R:14254518-14254616 -	ACCA-C------------CAAA-GGTCCCGATCCTGGGATGCATCTTGTGCAGTTATGTTCC--AAT-------CT----CACATCACTGGGCAAAGTGTGTCTCAAGATCCTGGCCACATCG--------------TCG
droSec1	super_1:13063812-13063910 -	ATCA-C------------CAAA-GGTCCCGATCCTGGGATGCATCTTGTGCAGTTATGTTTC--AAT-------CT----CACATCACTGGGCAAAGTGTGTCTCAAGATCCTGGCCACATCG--------------TCG
droYak2	chr2R:13623606-13623704 +	ACCA-T------------CAAA-GGTCCTGATCCTGGGATGCATCTTGTGCAGTCATGTTTC--CAT-------CT----CACATCACTGGGCAAAGTGTGTCTCAAGATCTTGGCCACTTCG--------------ACG
droEre2	scaffold_4845:9749329-9749427 -	ACCC-A------------CCAA-GGTCCTGATCCTGGGATGCATCTTGTGCAGTTATGTTTC--TAT-------CT----CACATCACTGGGCAAAGTGTGTCTCAAGATCCTGGCCACTTCG--------------ACG
droAna3	scaffold_13266:9731210-9731313 +	GCCC-C------------CAACTGGCTACGATCTTGGGACGCATTTTGTGCAGTTATGCACC--AAA-AATA------TATCCATCACTGGGCAAAGTGTGTCTCAGGATCTTGGCCATCTCA--------------ACG
dp4	chr3:12677741-12677846 -	ACGA-CGA--------TACCGA-GGCAACGATCCTGGGATGCATTTTGTGCAGTTATGTCTA--CGTGATCA------TCCTCATCACTGGGCAAAGTGTGTCTCAGGATTGCAGCCCCGCCA--------------A--
droPer1	super_2:8905820-8905925 +	ACGA-CGA--------TACCGA-GGCAACGATCCTGGGATGCATTTTGTGCAGTTATGTCTA--CGTGATCA------TCCTCATCACTGGGCAAAGTGTGTCTCAGGATTGCAGCCCCGCCA--------------A--
droWil1	scaffold_180701:1651920-1652025 -	TCGA-A------------TTTA-GACCATGATTTTGGGATGCATTTTGTGCAGTTATGTCTTCATGTGATAATTCT----CTCATCACTGGGCAAAGTGTGTCTCATAATTTTGGTAACCATA--------------T--
droVir3	scaffold_12875:4111929-4112038 +	AATAAAAATACCAGAATCTCAT-AGCTCTGCTTTTGGGATGCATTTTGTGCGGTTATGTCTG--CCT-------CCAAAACCCATCACTGGGCAAAGTGTGTCTCAAAATTGTGGCTACC--------------------
droMoj3	scaffold_6496:20936961-20937077 -	AACT-C------------TCGC-AGCTCTACTTTTGGGATGCATTTTGTGCAGATGTCTAAC--GAT-------TGGAAACCCATCACTGGGCAAAGTGTGTCTCAAAATTGGGGCAACTAGCACAAAGGAGGAGTGTTT
droGri2	scaffold_15112:2109003-2109099 -	AATT-T------------TCAT-AGCTCTGCTTTTGGGATGCATTCTGTACAGTAATGTTGA--CTCTTGTA------AAACCATCACTGGGCAAAGTGTGTCTCAAAATTGTGGCAA---------------------G