dme-mir-284
Changes
| Species | Chrom | Pos | Ref base | Type | A | C | G | T | RNAseq Total | A | C | G | T | Trace Total | Decision | Partition |
| droSim1 | chr3R | 13050849 | C | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0.222 | 0 | 0.778 | 9 | Genomic Error | 5' MOR |
Corrected Alignment:
| Species | Coordinate | Alignment |
|---|---|---|
| dm3 | chr3R:8377222-8377351 - | ATAATCGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGC-AAGGCTTGAATAATGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGAT-----------------------------------ATTCCTCAACAATG |
| droSim1 | chr3R:13050845-13050974 + | ATAATGGGTAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGC-AAGGCTTGAATACTGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGAT-----------------------------------ATTCCGCAACAATG |
| droSec1 | super_0:13609227-13609356 + | ATAATGGGTAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGC-AAGGCTTGAATACTGCTCCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCGAT-----------------------------------ATTCCGCAACAATG |
| droYak2 | chr3R:12662228-12662357 - | ATAATGGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGC-AAGGCTTGAGTACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAT-----------------------------------ATTCCGCAACAATG |
| droEre2 | scaffold_4770:13275536-13275665 + | TTAATGGGTGATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGC-AAGGCTTGAGTACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAT-----------------------------------ATTCCGCAACAATG |
| droAna3 | scaffold_12911:3307955-3308116 - | ACAAAAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTGAGGGC-AAGGCTTGAGAACTGCTTCAGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAGTACAGCA---GAAAGAGCCGTGAACCGTGTTCAATATGCCACGACAATG |
| dp4 | chr2:2484958-2485100 - | ATCAGAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGGGAAGGC-AAGGCTTGAGCACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAGCACAACGCTGAATGG------------TGCTCAAAATAC---------- |
| droPer1 | super_7:2652948-2653090 - | ATCAGAGGCAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGGGAAGGC-AAGGCTTGAGCACTGCTTCTGAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAGCACAACGCTGAATGG------------TGCTCAAAATAC---------- |
| droWil1 | scaffold_181130:2186197-2186330 - | GTGTGTGACAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTTAGGGGAAAGGCTTGAGCATTGCATACTAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAGCTCAACGTT--------------------------------CAACAGTG |
| droVir3 | scaffold_12855:584465-584599 + | ATAAATGGAAATTGCGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTAAAGGG-AAGGCTTGTGCACTGCTTACAAAGTCAGCAACTTGATTCCAGCAATTGCGGCCCAAGGACAACGTTGGAAAG------------TGTC------------------ |
| droMoj3 | scaffold_6540:12381805-12381927 - | TGTAT---TAATTGCGTTGCAGTTCCTGGAATAAAGTTGACTGTGTCGCCTGTAAGGGG-AAGGCTTTTGCATTGCTTACAAAGTCAGCAACTTGATTCCAGCAACTGCGGCCCAAGCT---------------------------------------CAACGTGG |
| droGri2 | scaffold_14906:1700701-1700824 + | ATA--TGGAAATTGGGTTGCAGTTCCTGGAATTAAGTTGACTGTGTAGCCTGTAAGAGG-AAGGCTTGTGCACTGCTTACAAAGTCAGCAACTTGATTCCAGCAATTGCGGCTCAAACT---------------------------------------CAACGTTG |