dme-mir-282
No changes
| Species | Chrom | Pos | Ref base | Type | A | C | G | T | RNAseq Total | A | C | G | T | Trace Total | Decision | Partition |
| droSim1 | chr3L | 2784478 | G | 3 | 0 | 0 | 0 | 0 | 1 | 0.625 | 0 | 0.375 | 0 | 16 | Ambiguous - Suggested base change does not agree with neighboring species |
3' MOR |
Uncorrected Alignment:
| Species | Coordinate | Alignment |
|---|---|---|
| dm3 | chr3L:3251007-3251133 + | CCGTTCTTT---------AACTATAGTTTCCTTCTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAA-AGCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAATCAGC------------------GAAAACGGA |
| droSim1 | chr3L:2784381-2784507 + | CCGTTCTTA---------AACTAAAGTTTCCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAA-AGCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAATCAGC------------------GAAAACGGA |
| droSec1 | super_2:3244745-3244871 + | CCGTTCTTA---------AAATAAAGTTTCCTTTTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAA-AGCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGTGAACAATCAGC------------------GAAAACGGA |
| droYak2 | chr3L:3795918-3796050 + | TCGTTCTATATCCGTTATAT---CAGTTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TACGAA-AGCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGTGAAAAATCAGC------------------GAAAACGGA |
| droEre2 | scaffold_4784:5933708-5933834 + | TCGTTCTAT---------CACCACAGTTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCAAA-AGCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAAGCAGC------------------GAAAACGGA |
| droAna3 | scaffold_13337:7556585-7556720 + | CCGTTCTAA-TTCGAAA-ATCGAAAATTTCCTTATAGATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAA-AGTCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGACAAGACATC----------------ACAAAAACGGA |
| dp4 | chrXR_group8:3299974-3300083 - | ---------------------------TGCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGAAAACCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGAAGAAATGCATC------------------AAAAGCGGA |
| droPer1 | super_65:103931-104040 - | ---------------------------TGCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGAAAACCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGAAGAAATGCATC------------------AAAAGCGGA |
| droWil1 | scaffold_181136:1999668-1999787 + | TTTTCCTTTAT--GTAA-TATTAATATATCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGGA------TTCAGACATAGCCTATGAGAGGTTAGGTGTACCAAGGAGAAAATACAAC------------------A-------- |
| droVir3 | scaffold_12758:910696-910814 - | GCGTCCGAC--------------AAATTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTCGAT-ATACGGTCAGACATAGCCTATGAGAGGTTAGGTGTACCAAGGGG-ACAAGCAGC------------------GAGGGCG-- |
| droMoj3 | scaffold_6680:1963284-1963406 - | ATTTTTTTT-TGCG------GT-GCATTTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCA--TTTGAT-ATAAGATCAGACATAGCCTATGAGAGGTTAGGTGTAGCAAGGGG-TCAAACAGC------------------AGA----GA |
| droGri2 | scaffold_15110:607073-607202 + | ---------------------------TTCCTTATAAATCTAGCCTCTACTAGGCTTTGTCTGTGCACTTTTTCA-ATTCAATCAGACATAGCCTATGAGAGGTTAGGTGTACAAATGGATCAAAGCAACAAGGCTGCTGTCGGGGACTAAAAATGA |