dme-mir-184

No changes

Species Chrom Pos Ref base Type A C G T RNAseq Total A C G T Trace Total Decision Partition
dp4 chr3 696774 A 2 0 0 0 1 21 1 0 0 0 27 Invalid- 3' RNA-editing 3' flanking region

 

Uncorrected Alignment:

dme-mir-184

Species Coordinate Alignment
dm3 chr2R:9216892-9217021 - CT----GGGCTGA-------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCACTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAACCAAT-----------------------------AC-------------------------CCATT--
droSim1 chr2R:7673827-7673955 - CT----GGGCTGA-------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGC-AAT-----------------------------CC-------------------------CCATT--
droSec1 super_1:6740004-6740132 - TT----GGGCTGA-------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGC-AAT-----------------------------CT-------------------------CCATT--
droYak2 chr2R:7742247-7742374 + CT----GGGCTGA-------------CCCGAGTGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATT-GAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAAGC-AAT-----------------------------CC-------------------------CCATT--
droEre2 scaffold_4845:16598085-16598213 + CT----GGGCTGA-------------CCCGAGGGTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGCATTTAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCGTCAAGC-AAT-----------------------------CC-------------------------CCAGT--
droAna3 scaffold_13266:16524568-16524693 - CCCA--GTGCCGG----------------CGAGTCCGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATAATGAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAATTCATCAGGT-TGT--------------------------------------------------------CCATC--
dp4 chr3:696696-696816 + ------GGGTCGG----CCCGGGGAC--TCCGGGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA----------------------------------------------------------------------
droPer1 super_2:863138-863258 + ------GGGTCGG----CCCGGGGAC--TCCGGGTCGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATTAAAAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCA----------------------------------------------------------------------
droWil1 scaffold_181009:2073162-2073280 - ACGCGAAGAGTCA-------------GT-TAAAGCTGACCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCAACA----------------------------------------------------------------------
droVir3 scaffold_12875:243286-243412 + TT----GGGCT-----------------------TTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTAGACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAAC-TAAGTGCAGCA---------------------AC-------------------------TATTT--
droMoj3 scaffold_6496:5255786-5255918 - AA----TGGCCAATCTGCCGT-------TGGGCATTGGCCGGTGCATTCGTACCCTTATCATTCTCGCGCCCCGTGTGCATATCTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAAGTCAACTAA---AT-----------------------------AC-------------------------ATGCG--
droGri2 scaffold_15245:10719551-10719668 - CC----AGCCTGC-------------ATATGGTTTTGGCCGGTGCATTCGTACCCTTATCATTCTCTCGCCCCGTGTGGATAACTATACAACTGGACGGAGAACTGATAAGGGCTCGTATCACCAACTCATCAAA--------------------------------------------------------------------