dme-mir-1015
No changes
| Species | Chrom | Pos | Ref base | Type | A | C | G | T | RNAseq Total | A | C | G | T | Trace Total | Decision | Partition |
| droGri2 | scaffold_14906 | 156670 | A | 3 | 0 | 0 | 0 | 0 | 0 | 0.4 | 0 | 0.6 | 0 | 10 | Invalid- Polymorphism located within species specific insertion | Loop |
Uncorrected alignment
| Species | Coordinate | Alignment |
|---|---|---|
| dm3 | chr3R:20164939-20165032 + | TCATGGGCTACGACGGTGAGTG----ATGCTCCAGTTAGCTTGGCTGAGTGAG-G--------A----TT------TAAGTCCTGGGAC-----ATCTCTCTTGCAGTCAAGATCCTGAAAG |
| droSim1 | chr3R:19998542-19998635 + | TCATGGGCTACGACGGTGAGTG----ATGCTCCAGTTAGCTTGGCTGAGTGAG-G--------A----TT------TAAGTCCTGGGAC-----ATCTCTCTTGCAGTCAAGATCCTAAAAG |
| droSec1 | super_0:20503496-20503589 + | TCATGGGCTACGACGGTGAGTG----ATGCTCCAGTTAGCTTGTCTGAGTGAG-A--------C----TT------TAAGTCCTGGGAC-----ATCTCTCTTGCAGTCAAGATCCTAAAAG |
| droYak2 | chr3R:26340571-26340664 - | TCATGGGCTACGACGGTGAGTG----ATGCTCCAGATAGCTTGACTGGGTGAG-G--------A----TT------TAAGTCCTGGGAC-----ATCTCTCTTGCAGTCAAGATCCTGAAAC |
| droEre2 | scaffold_4820:7895693-7895786 - | TCATGGGCTACGACGGTGAGTG----ATGCTCCAGATAGCTTGGCTGAGTGAG-G--------A----CT------TAAGTCCTGGGAC-----ATCTCTCTTGCAGTCAAAATCCTAAAAC |
| droAna3 | scaffold_13088:204245-204339 + | TCATGGGCTACGACAGTGAGTG----ATGCTCCAGATAGGTTGGCTTAGGAAGTC--------A----TT------AAAGCCCTGGGAT-----GTCTCTCTTGCAGTTAAGATCCTGAAAC |
| dp4 | chr2:18646206-18646298 - | TGATGGGCTACGATGGTAAGAG----CTAGCCA-CACAAATTA------TTAG-T--------A----TTTC----TATTTCTCAAAATATTT-CTTTCTTTTGCAGTCAAGATACTAAAGC |
| droPer1 | super_3:1376406-1376498 - | TGATGGGCTACGATGGTAAGAG----CTAGCCA-CACAAATTA------TTAG-T--------A----TTTC----TATTTCTCAAAATATTC-CTTTCTTTTGCAGTCAAGATCCTAAAGC |
| droWil1 | scaffold_181108:4541725-4541808 - | TAATGGGTTATGACAGTAAGTTA--GCTGGTAAAGTTGATTTCT------------------------TT------TAACTAATGT-GT-----ATATTTACTGTAGTAAGAATTTTAAAGC |
| droVir3 | scaffold_13047:3497490-3497590 + | TTGTGGGCTACGAAAGTAAGTA----T-TTACTTGATAACTCGTT------AA-ACCTAAAGTC----TGTT----AACCACTCTTATAACTATG-CATCTAAACAGTTAAGGTACTAAAGA |
| droMoj3 | scaffold_6540:20508341-20508431 + | TAATGGGCTACGATGGTAAATG-CTGATGTTCATGAATATTTATCCAAGTAAT-T--------T----------------CTTTACGTT-----GTCTTCTTAACAGTTAAGGTTTTGAAAA |
| droGri2 | scaffold_14906:156637-156731 + | TGGTGGGCTATGATAGTGAGTTG---ATTCTATTGT--AATAATC-AAATC-G-T--------T----TTTG----TTATTTTATAAAC---ATGCCATTTTAACAGTCAAGATACTCAAGA |