ID: rheMac3_genscan_chr5.333_1.5p
GENE: Other-(2)
chr5:17220110-17220459+


Display Libraries
(1)
HEART
(2)
KIDNEY
(3)
OTHER
(1)
TESTES

Sense strand
ACTGGCTGGAGGAACTGAGAAAGCTTATGGAGACAAAGCCTTTGGCAAATGTAAGTCAAAACAAATTTTCAGCCCAAGACAAAATTATGTTATGTTGAAAACAGCTCGGTTAGCTGAATGTTCTTATATGTGCCCAGGCAACAACATTTCTTTAGATATTTATCCACATTCTCTTTTATTGTTTTACTTCCATTGTGAAGAAAATGTAGCTGCTTTATACTGAGACGAAATTTTTAAATCCATTCAAAAGTGTGGAAGGACTCAAAGCAATCTTCACAATTCAAAAGTTCTATTGGGAGGTTTAAGACTTAGAGGAATGTAAAGAAGTAGCCAACTCTGTGAAAGAATTT


SizePerfect hitTotal NormPerfect NormSRR553579(SRX182785)
source: Heart. (Heart)
SRR553605(SRX182811)
source: Frontal Cortex. (Frontal Cortex)
SRR553606(SRX182812)
source: Kidney. (Kidney)
SRR553577(SRX182783)
source: Frontal Cortex. (Frontal Cortex)
SRR553581(SRX182787)
source: Testis. (testes)
SRR553580(SRX182786)
source: Kidney. (Kidney)
SRR553578(SRX182784)
source: Cerebellum. (Cerebellum)
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATGT..................20333.500.50151.50110.0065.007.00---
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATGTA.................21193.000.5089.0058.0043.502.50---
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATG...................1925.500.5014.508.003.00----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTAGTAT.................2023.000.0013.003.006.001.00---
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATTAT.................2017.431.434.006.296.710.14-0.140.14
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATTAT.................2111.000.502.004.004.500.50---
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTAT....................1810.000.506.501.002.000.50---
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATGA..................197.001.433.862.430.71----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTAGTTAT................215.000.003.00-2.00----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATGA..................205.000.502.502.000.50----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTAGGTAT................213.000.003.00------
..........................................................................................................................................................................................................................................................................................................................GAATGTAAAGAAGTAGTAT.................193.000.002.00-1.00----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTAGTAT.................213.000.00-3.00-----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATT...................192.500.501.001.50-----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATA...................192.500.501.000.501.00----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATAT..................192.431.431.000.710.71----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATTT..................192.431.430.291.290.86----
........GAGGAACTGAGAAAGGAAC...................................................................................................................................................................................................................................................................................................................................192.000.00--2.00----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATAT..................202.000.50-1.001.00----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGT......................1661.831.830.671.000.17----
..........................................................................................................................................................................................................................................................................................................................GAATGTAAAGAAGTATTAT.................191.820.060.290.530.880.06--0.06
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATTTA.................201.711.430.140.710.86----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTACGT..................191.571.43-0.291.29----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATGC..................191.571.430.291.140.14----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATGTT.................211.500.50-1.50-----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATGTG.................211.500.500.50-1.00----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTA.....................1671.431.430.86-0.430.14---
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTTAT...................181.371.320.530.370.420.05---
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGT......................15191.321.321.000.110.110.05-0.05-
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTTAT...................191.171.830.500.500.17----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATGCA.................201.141.430.290.430.43----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATGTT.................201.141.430.430.140.57----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTTTAT..................191.111.320.260.420.42----
..........................................................................................................................................................................................................................................................................................................................GAATGTAAAGAAGTAGTTAT................201.000.00--1.00----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTAAGT..................201.000.50-1.00-----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTACGT..................201.000.500.50-0.50----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTAGTTAT................221.000.00-1.00-----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTAGGC..................191.000.00-1.00-----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATGC..................201.000.50-1.00-----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTAGGT..................191.000.00-1.00-----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTAGCTAC................211.000.001.00------
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTAGCAT.................201.000.00-1.00-----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATCTA.................201.001.430.430.430.14----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTAGGTAT................221.000.00--1.00----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATGAT.................211.000.500.500.50-----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTAGTATA................211.000.001.00------
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATGAA.................201.001.430.710.140.14----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATTA..................190.861.43-0.430.43----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTACGTA.................200.711.43-0.71-----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATT...................180.711.430.140.290.29----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTTTAT..................200.671.830.170.170.33----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATGAT.................200.571.43--0.57----
..........................................................................................................................................................................................................................................................................................................................GAATGTAAAGAAGTATGA..................180.530.060.180.240.12----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTACGTA.................210.500.50-0.50-----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTGTGT..................200.501.83-0.50-----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATCTA.................210.500.500.50------
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATTT..................200.500.50--0.50----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATGAA.................210.500.500.50------
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTAC....................180.500.500.50------
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATTTA.................210.500.50-0.50-----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATGG..................200.500.50-0.50-----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATATA.................210.500.50-0.50-----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTA.....................1720.500.50-0.50-----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATTAC.................210.500.50-0.50-----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTAAT...................190.500.50-0.50-----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTATCT..................200.500.50-0.50-----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATTAA.................200.431.430.14-0.29----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATCT..................190.431.430.290.14-----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATTAC.................200.431.430.290.14-----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTAAGT..................190.431.43--0.43----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATGG..................190.431.430.29-0.14----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTCTAT..................190.421.320.260.050.11----
..........................................................................................................................................................................................................................................................................................................................GAATGTAAAGAAGTATTT..................180.350.06-0.120.24----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTCTAT..................200.331.830.33------
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTGTAT..................200.331.830.33------
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTGTAT..................190.321.320.210.050.05----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTGTGT..................190.321.320.050.210.05----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATGTG.................200.291.43-0.140.14----
..........................................................................................................................................................................................................................................................................................................................GAATGTAAAGAAGTATCT..................180.240.06-0.24-----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTTTGT..................190.211.320.16-0.05----
..........................................................................................................................................................................................................................................................................................................................GAATGTAAAGAAGTATCTA.................190.180.06--0.18----
..........................................................................................................................................................................................................................................................................................................................GAATGTAAAGAAGTATGTT.................190.180.06-0.060.12----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTTAAT..................200.171.83-0.17-----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAGTTATA..................200.171.83---0.17---
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTTAC...................180.161.320.050.050.05----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTATTC..................190.141.430.14------
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTAAGTA.................200.141.43--0.14----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTACTAT.................200.141.43-0.14-----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTAAGA..................190.141.430.14------
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTACG...................180.141.43-0.14-----
..........................................................................................................................................................................................................................................................................................................................GAATGTAAAGAAGTATTAC.................190.120.060.060.06-----
..........................................................................................................................................................................................................................................................................................................................GAATGTAAAGAAGTATGG..................180.120.060.12------
..........................................................................................................................................................................................................................................................................................................................GAATGTAAAGAAGTATTTA.................190.120.06--0.12----
..........................................................................................................................................................................................................................................................................................................................GAATGTAAAGAAGTACGT..................180.120.06--0.12----
..........................................................................................................................................................................................................................................................................................................................GAATGTAAAGAAGTATT...................170.120.06-0.12-----
........................................................................................................................................................................................................................................................................................................................AGGAATGTAAAGAAG.......................15180.110.11-0.060.06----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTCTA...................180.111.320.05-0.05----
..........................................................................................................................................................................................................................................................................................................................GAATGTAAAGAAGTATGC..................180.060.06-0.06-----
..........................................................................................................................................................................................................................................................................................................................GAATGTAAAGAAGTA.....................15170.060.06-0.06-----
..........................................................................................................................................................................................................................................................................................................................GAATGTAAAGAAGTATTA..................180.060.06--0.06----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTCTAC..................190.051.32--0.05----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTCTGT..................190.051.320.05------
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTGTAC..................190.051.320.05------
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTTTA...................180.051.32--0.05----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTTTAC..................190.051.32--0.05----
.........................................................................................................................................................................................................................................................................................................................GGAATGTAAAGAAGTTTTT..................190.051.32-0.05-----

Antisense strand
ACTGGCTGGAGGAACTGAGAAAGCTTATGGAGACAAAGCCTTTGGCAAATGTAAGTCAAAACAAATTTTCAGCCCAAGACAAAATTATGTTATGTTGAAAACAGCTCGGTTAGCTGAATGTTCTTATATGTGCCCAGGCAACAACATTTCTTTAGATATTTATCCACATTCTCTTTTATTGTTTTACTTCCATTGTGAAGAAAATGTAGCTGCTTTATACTGAGACGAAATTTTTAAATCCATTCAAAAGTGTGGAAGGACTCAAAGCAATCTTCACAATTCAAAAGTTCTATTGGGAGGTTTAAGACTTAGAGGAATGTAAAGAAGTAGCCAACTCTGTGAAAGAATTT


SizePerfect hitTotal NormPerfect NormSRR553579(SRX182785)
source: Heart. (Heart)
SRR553605(SRX182811)
source: Frontal Cortex. (Frontal Cortex)
SRR553606(SRX182812)
source: Kidney. (Kidney)
SRR553577(SRX182783)
source: Frontal Cortex. (Frontal Cortex)
SRR553581(SRX182787)
source: Testis. (testes)
SRR553580(SRX182786)
source: Kidney. (Kidney)
SRR553578(SRX182784)
source: Cerebellum. (Cerebellum)
....................................................................................................................................................................................................tggtCAGCTACATTTTTGGT...................................................................................................................................... 201.000.00---1.00---
.........................................................................................................................................................tttgTGTGGATAAATGTTT.................................................................................................................................................................................. 191.000.00----1.00--
....................................................................................................................................................................................................gttAGCTACATTTTCTTG........................................................................................................................................ 181.000.00---1.00---