ID: rheMac3_genscan_chr4.1677_18.5p
GENE: Other-PHIP(19)
chr4:76977336-76977685-


Display Libraries
(1)
HEART
(2)
KIDNEY
(3)
OTHER
(2)
TESTES

Sense strand
ATTGTGAAATCTGCTAAATTCGTGACTGATCTTCTTCTACATTTTATAAAGTAAGTTATTTTTTCATACGTAATTATGATAGTTTTAATAATTAATGGCACTATAGTTCCTCTTAAAATAGAAAACATACTGTTTGTAAAGAGGAAACGTTTACGAGTAGCCAAAATAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTTGATCCTGGGTTTTGGAAGAAACAGGTCATTGGCTAATAATAAGAATGAAATCATAAAAGCTGCATTACCATTGTGTTTTAAGGTTAAAATTTTTTTTAAAAGATTCTTTTCGCAATCTAACTGTTAGACAATAAT
........................................................................................................................................................................((((........)))).((((((((..((((....))))..)))))))).....................................................................................................................................
......................................................................................................................................................................167.....................................................223.............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553580(SRX182786)
source: Kidney. (Kidney)
SRR553606(SRX182812)
source: Kidney. (Kidney)
SRR553579(SRX182785)
source: Heart. (Heart)
SRR553578(SRX182784)
source: Cerebellum. (Cerebellum)
SRR553577(SRX182783)
source: Frontal Cortex. (Frontal Cortex)
SRR553605(SRX182811)
source: Frontal Cortex. (Frontal Cortex)
SRR553607(SRX182813)
source: Testis. (testes)
SRR553581(SRX182787)
source: Testis. (testes)
...........................................................................................................................................................................CAGTTGGGAGAGCATTA..................................................................................................................................................................1735.675.674.001.67------
...........................................................................................................................................................................CAGTTGGGAGAGCATT...................................................................................................................................................................1634.674.674.330.33------
.............................................................................................................................................................................GTTGGGAGAGCATTAGACTGAAGATC.......................................................................................................................................................2613.003.001.00-1.00--1.00--
...........................................................................................................................................................................CAGTTGGGAGAGCATTAGA................................................................................................................................................................1932.672.670.331.330.330.67----
..............................................................................................................................................................................................CTGAAGATCTAAAGGTCCCTGGT.........................................................................................................................................2392.112.111.11-0.67-0.11--0.22
.............................................................................................................................................................................GTTGGGAGAGCATTAGACTGAAGAT........................................................................................................................................................2512.002.00-2.00------
............................................................................................................................................................................AGTTGGGAGAGCATTAGACTGAAGATCTAA....................................................................................................................................................3012.002.00-1.00----1.00-
..........................................................................................................................................................................TCAGTTGGGAGAGCACC...................................................................................................................................................................172.000.00-2.00------
...........................................................................................................................................................................CAGTTGGGAGAGCATTAGACTGAAGATC.......................................................................................................................................................2812.002.002.00-------
...........................................................................................................................................................................CAGTTGGGAGAGCATTAGACTGAAGAT........................................................................................................................................................2712.002.001.001.00------
.........................................................................................................................................................................CTCAGTTGGGAGAGCTTA...................................................................................................................................................................182.000.002.00-------
............................................................................................................................................................................AGTTGGGAGAGCATTAGACTGAA...........................................................................................................................................................2331.671.67--0.670.33---0.67
.............................................................................................................................................................................GTTGGGAGAGCATTAGACTGAA...........................................................................................................................................................2231.671.670.330.670.330.33----
..........................................................................................................................................................................TCAGTTGGGAGAGCATTAGA................................................................................................................................................................2031.331.330.67--0.33--0.33-
..............................................................................................................................................................................TTGGGAGAGCATTAGACTGAAGATC.......................................................................................................................................................2511.001.00-1.00------
.........................................................................................................................................................................CTCAGTTGGGAGAGCTTTA..................................................................................................................................................................191.000.001.00-------
......................................................................................................................................................................................................CTAAAGGTCCCTGGT.........................................................................................................................................15131.001.000.08-0.460.080.080.230.08-
............................................................................................................................................................................AGTTGGGAGAGCATTAGACTGAAGAT........................................................................................................................................................2611.001.00--1.00-----
........................................................................................................................................................................................................AAAGGTCCCTGGTTTCCCG...................................................................................................................................191.000.00-1.00------
...........................................................................................................................................................................................AGACTGAAGATCTAAAGGTCCCTGGTTTT......................................................................................................................................291.000.00--1.00-----
...........................................................................................................................................................................................AGACTGAAGATCTAAAGGTCCCTGGT.........................................................................................................................................2690.670.670.110.110.44-----
...........................................................................................................................................................................CAGTTGGGAGAGCATTAG.................................................................................................................................................................1830.670.67-0.67------
.............................................................................................................................................................................GTTGGGAGAGCATTAGA................................................................................................................................................................1730.670.67-0.33-0.33----
...........................................................................................................................................................................CAGTTGGGAGAGCATTAGACTGAA...........................................................................................................................................................2430.670.67-0.67------
............................................................................................................................................................................AGTTGGGAGAGCATTAGACTGA............................................................................................................................................................2230.670.67-0.33-0.33----
..............................................................................................................................................................................................CTGAAGATCTAAAGGTCCCTGG..........................................................................................................................................2290.560.560.110.110.11-0.22---
..............................................................................................................................................................................................CTGAAGATCTAAAGGTCCCTG...........................................................................................................................................2190.440.44---0.110.33---
.....................................................................................................................................................................................................TCTAAAGGTCCCTGG..........................................................................................................................................15170.350.35--0.240.060.06---
............................................................................................................................................................................AGTTGGGAGAGCATTAGACTGAAAA.........................................................................................................................................................250.331.67---0.33----
............................................................................................................................................................................AGTTGGGAGAGCATTAGACTGAAAATC.......................................................................................................................................................270.331.67------0.33-
..........................................................................................................................................................................TCAGTTGGGAGAGCATTA..................................................................................................................................................................1830.330.330.33-------
..........................................................................................................................................................................TCAGTTGGGAGAGCATTAG.................................................................................................................................................................1930.330.330.33-------
............................................................................................................................................................................AGTTGGGAGAGCATTAGACTGAACAT........................................................................................................................................................260.331.670.33-------
.........................................................................................................................................................................CTCAGTTGGGAGAGCATTA..................................................................................................................................................................1930.330.330.33-------
.........................................................................................................................................................................CTCAGTTGGGAGAGCATTAGA................................................................................................................................................................2130.330.330.33-------
...............................................................................................................................................................................................TGAAGATCTAAAGGTCCCTGT..........................................................................................................................................210.330.11--0.110.22----
..............................................................................................................................................................................................CTGAAGATCTAAAGGTCCC.............................................................................................................................................1990.330.330.33-------
.............................................................................................................................................................................GTTGGGAGAGCATTAGACTGA............................................................................................................................................................2130.330.330.33-------
...........................................................................................................................................................................CAGTTGGGAGAGCAT....................................................................................................................................................................1560.330.330.170.17------
....................................................................................................................................................................................................ATCTAAAGGTCCCTGGTTCC......................................................................................................................................200.270.27---0.090.18---
....................................................................................................................................................................................................ATCTAAAGGTCCCTGGTTCGTT....................................................................................................................................220.270.270.09----0.18--
....................................................................................................................................................................................................ATCTAAAGGTCCCTGGTT........................................................................................................................................18110.270.27----0.180.09--
.....................................................................................................................................................................................................TCTAAAGGTCCCTGGT.........................................................................................................................................16120.250.25-0.08-0.08---0.08
....................................................................................................................................................................................................ATCTAAAGGTCCCTGG..........................................................................................................................................16130.230.23----0.15--0.08
..........................................................................................................................................................................................TAGACTGAAGATCTAAAGGTCCCTGGT.........................................................................................................................................2790.220.22--0.11-0.11---
............................................................................................................................................................................................GACTGAAGATCTAAAGGTCCCTGGT.........................................................................................................................................2590.220.22--0.22-----
...........................................................................................................................................................................................AGACTGAAGATCTAAAGGTCCC.............................................................................................................................................2290.220.220.11-0.11-----
................................................................................................................................................................................................GAAGATCTAAAGGTCCCTGG..........................................................................................................................................2090.220.22-----0.22--
..............................................................................................................................................................................................CTGAAGATCTAAAGGTCCCTGGTT........................................................................................................................................2490.220.220.22-------
............................................................................................................................................................................................GACTGAAGATCTAAAGG.................................................................................................................................................17110.180.18--0.090.09----
....................................................................................................................................................................................................ATCTAAAGGTCCCTG...........................................................................................................................................15150.130.13----0.070.07--
.......................................................................................................................................................................AGCTCAGTTGGGAGAG.......................................................................................................................................................................16170.120.120.12-------
...............................................................................................................................................................................................TGAAGATCTAAAGGTCCCTGGT.........................................................................................................................................2290.110.110.11-------
...............................................................................................................................................................................................TGAAGATCTAAAGGTCCCTGG..........................................................................................................................................2190.110.110.11-------
............................................................................................................................................................................................GACTGAAGATCTAAAGGTCCCTG...........................................................................................................................................2390.110.11----0.11---
.............................................................................................................................................................................................ACTGAAGATCTAAAGGTCCCTGG..........................................................................................................................................2390.110.11-------0.11
...............................................................................................................................................................................................TGAAGATCTAAAGGTCCCTGGTA........................................................................................................................................230.110.11-----0.11--
..............................................................................................................................................................................................CTGAAGATCTAAAGGTCCCT............................................................................................................................................2090.110.110.11-------
...............................................................................................................................................................................................TGAAGATCTAAAGGTCCCTG...........................................................................................................................................2090.110.11-----0.11--
..............................................................................................................................................................................................CTGAAGATCTAAAGGTCCCTGTTTT.......................................................................................................................................250.110.44--0.11-----
..............................................................................................................................................................................................CTGAAGATCTAAAGGTCCCTGTA.........................................................................................................................................230.110.44----0.11---
..............................................................................................................................................................................................CTGAAGATCTAAAGGT................................................................................................................................................1690.110.11----0.11---
..................................................................................................................................................................................................AGATCTAAAGGTCCCTGGT.........................................................................................................................................19100.100.10--0.10-----
....................................................................................................................................................................................................ATCTAAAGGTCCCTGGTCGAT.....................................................................................................................................210.090.09-----0.09--
....................................................................................................................................................................................................ATCTAAAGGTCCCTGGT.........................................................................................................................................17110.090.09-0.09------
.....................................................................................................................................................................................................TCTAAAGGTCCCTGGTT........................................................................................................................................17110.090.09----0.09---
....................................................................................................................................................................................................ATCTAAAGGTCCCTGGTTCGGT....................................................................................................................................220.090.27----0.09---
......................................................................................................................................................................................................CTAAAGGTCCCTGGTT........................................................................................................................................16110.090.09----0.09---
...................................................................................................................................................................................................GATCTAAAGGTCCCT............................................................................................................................................15130.080.08----0.08---
......................................................................................................................................................................TAGCTCAGTTGGGAGAGC......................................................................................................................................................................18140.070.07-0.07------
.....................................................................................................................................................................ATAGCTCAGTTGGGAGAGC......................................................................................................................................................................19140.070.07-0.07------
........................................................................................................................................................................GCTCAGTTGGGAGAGC......................................................................................................................................................................16140.070.07----0.07---
....................................................................................................................................................................................................ATCTAAAGGTCCCTGAGA........................................................................................................................................180.070.130.07-------
...................................................................................................................................................................AAATAGCTCAGTTGGGAGAG.......................................................................................................................................................................20160.060.06---0.06----
....................................................................................................................................................................AATAGCTCAGTTGGGAGAG.......................................................................................................................................................................19160.060.06---0.06----
.......................................................................................................................................................................................................TAAAGGTCCCTGGTT........................................................................................................................................15170.060.060.06-------
......................................................................................................................................................................TAGCTCAGTTGGGAGAG.......................................................................................................................................................................17170.060.06--0.06-----
...................................................................................................................................................................AAATAGCTCAGTTGGGAG.........................................................................................................................................................................18170.060.06---0.06----
..............................................................................................................................................................................................CTGAAGATCTAAAGG.................................................................................................................................................15180.060.06--0.06-----

Antisense strand
ATTGTGAAATCTGCTAAATTCGTGACTGATCTTCTTCTACATTTTATAAAGTAAGTTATTTTTTCATACGTAATTATGATAGTTTTAATAATTAATGGCACTATAGTTCCTCTTAAAATAGAAAACATACTGTTTGTAAAGAGGAAACGTTTACGAGTAGCCAAAATAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTTGATCCTGGGTTTTGGAAGAAACAGGTCATTGGCTAATAATAAGAATGAAATCATAAAAGCTGCATTACCATTGTGTTTTAAGGTTAAAATTTTTTTTAAAAGATTCTTTTCGCAATCTAACTGTTAGACAATAAT
........................................................................................................................................................................((((........)))).((((((((..((((....))))..)))))))).....................................................................................................................................
......................................................................................................................................................................167.....................................................223.............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553580(SRX182786)
source: Kidney. (Kidney)
SRR553606(SRX182812)
source: Kidney. (Kidney)
SRR553579(SRX182785)
source: Heart. (Heart)
SRR553578(SRX182784)
source: Cerebellum. (Cerebellum)
SRR553577(SRX182783)
source: Frontal Cortex. (Frontal Cortex)
SRR553605(SRX182811)
source: Frontal Cortex. (Frontal Cortex)
SRR553607(SRX182813)
source: Testis. (testes)
SRR553581(SRX182787)
source: Testis. (testes)
...................................................................................................................................................................................................AACCAGGGACCTTTAGATC........................................................................................................................................ 19110.180.18-------0.18
.....................................................................................................................................................................................................AACCAGGGACCTTTAGA........................................................................................................................................ 17110.090.09------0.09-
...................................................................................................................AGTATGTTTTCTATTT........................................................................................................................................................................................................................... 16130.080.08-0.08------