ID: rheMac3_genscan_chr15.1893_10.3p
GENE: Other-Ubqln1(11)
chr15:93297682-93298031-


Display Libraries
(1)
HEART 		(2)
KIDNEY 		(3)
OTHER 		(2)
TESTES

Sense strand
CGGCGAAGGGCCGTGGGGGAAGGGGCAGGGAGGAGGAAGCGGTGGCTGCTGCGGATGTCGATGTGAGCGAGCGGCGCCTGAACACACGGCGACTGCCGAGCGCCTGACCCGGGCCTGCGCCAGAGCCTGCACCGAGCTCCGAGGCCCCACACCCGCTAGGGTGGCCCTGCGCCCGTTGCTAGTGAGGCGGCGTGCTCTGCATTCTTCGCTGTCCAGGCCTGTCGGCTTTGGTGTCTGCTGGCTCCTCCTTGCTCGCCTGCTCACTCCTGCTTGCCTGAGTCACCGCCGCCGCCGCTGCAGCCATGGCCGAGAGTGGTGAAAGCGGCGGTCCTCCGGGCTCCCAGGATAGC
...................................................((((..(((.(((..((....(((((.........((((....))))...(((((...)))))..)))))...))..))).)))..)))).................................................................................................................................................................................................................
..................................................51.............................................................................................146..........................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553605(SRX182811)
source: Frontal Cortex. (Frontal Cortex)		SRR553577(SRX182783)
source: Frontal Cortex. (Frontal Cortex)		SRR553580(SRX182786)
source: Kidney. (Kidney)		SRR553578(SRX182784)
source: Cerebellum. (Cerebellum)		SRR553579(SRX182785)
source: Heart. (Heart)		SRR553606(SRX182812)
source: Kidney. (Kidney)		SRR553581(SRX182787)
source: Testis. (testes)		SRR553607(SRX182813)
source: Testis. (testes)
.....................................................GATGTCGATGTGAGCGAG.......................................................................................................................................................................................................................................................................................18112.0012.001.004.002.005.00----
........................................................GTCGATGTGAGCGAGCGG....................................................................................................................................................................................................................................................................................1819.009.002.002.001.002.00-2.00--
.....................................................GATGTCGATGTGAGCGAGC......................................................................................................................................................................................................................................................................................1915.005.001.002.00--1.001.00--
.......................................................................CGGCGCCTGAACACACGG.....................................................................................................................................................................................................................................................................1815.005.001.001.002.00--1.00--
.....................................................GATGTCGATGTGAGCGAGCGG....................................................................................................................................................................................................................................................................................2113.003.001.00-1.00--1.00--
....................................................GGATGTCGATGTGAG...........................................................................................................................................................................................................................................................................................1513.003.002.00-----1.00-
......................................................ATGTCGATGTGAGCGAG.......................................................................................................................................................................................................................................................................................1712.002.00-1.00-1.00----
.......................................................................CGGCGCCTGAACACACGGC....................................................................................................................................................................................................................................................................1912.002.00----2.00---
........................................................................................................................CAGAGCCTGCACCGAGCTCCGAGGC.............................................................................................................................................................................................................2512.002.002.00-------
.....................................................GATGTCGATGTGAGCG.........................................................................................................................................................................................................................................................................................1612.002.00-1.00-1.00----
...................................................CGGATGTCGATGTGAGCGAGC......................................................................................................................................................................................................................................................................................2112.002.00----1.00-1.00-
..................................................GCGGATGTCGATGTGAGCGAGCGG....................................................................................................................................................................................................................................................................................2411.001.00--1.00-----
........................................................................GGCGCCTGAACACACGG.....................................................................................................................................................................................................................................................................1711.001.00-1.00------
.............................................................................CTGAACACACGGCGACTGC..............................................................................................................................................................................................................................................................1911.001.00--1.00-----
...................................................CGGATGTCGATGTGAGCGAGCGG....................................................................................................................................................................................................................................................................................2311.001.00----1.00---
...............................................GCTGCGGATGTCGATG...............................................................................................................................................................................................................................................................................................1611.001.001.00-------
.............................................................................CTGAACACACGGCGACTGCCGAGCGCCTG....................................................................................................................................................................................................................................................2911.001.001.00-------
............................................................................CCTGAACACACGGCGAC.................................................................................................................................................................................................................................................................1711.001.001.00-------
.................................................TGCGGATGTCGATGTGAGCGAGC......................................................................................................................................................................................................................................................................................2311.001.00--1.00-----
.............................................................................CTGAACACACGGCGA..................................................................................................................................................................................................................................................................1511.001.001.00-------
......................................................ATGTCGATGTGAGCGAGCGG....................................................................................................................................................................................................................................................................................2011.001.00-----1.00--
.............................................................................CTGAACACACGGCGACTG...............................................................................................................................................................................................................................................................1811.001.00----1.00---
..............................................................................................................................CTGCACCGAGCTCCGAGGC.............................................................................................................................................................................................................1911.001.00--1.00-----
......................................................................GCGGCGCCTGAACACACGG.....................................................................................................................................................................................................................................................................1911.001.00-----1.00--
................................................CTGCGGATGTCGATGTGAG...........................................................................................................................................................................................................................................................................................1911.001.00--1.00-----
...............................................................................................................................TGCACCGAGCTCCGA................................................................................................................................................................................................................1511.001.00------1.00-
............................................................................CCTGAACACACGGCGACTGC..............................................................................................................................................................................................................................................................2011.001.00-1.00------
......................................................................GCGGCGCCTGAACACACGGC....................................................................................................................................................................................................................................................................2011.001.00-1.00------
...................................................CGGATGTCGATGTGAATC.........................................................................................................................................................................................................................................................................................181.000.00-----1.00--
....................................................................GAGCGGCGCCTGAACACAC.......................................................................................................................................................................................................................................................................1911.001.00----1.00---
..............................................................................................GCCGAGCGCCTGACCCGG..............................................................................................................................................................................................................................................1811.001.00--1.00-----
..................................................................GCGAGCGGCGCCTGAACACACGGC....................................................................................................................................................................................................................................................................2411.001.00----1.00---
...................................................................................................GCGCCTGACCCGGGCCTGC........................................................................................................................................................................................................................................1911.001.00----1.00---
....................................................................GAGCGGCGCCTGAACACACGG.....................................................................................................................................................................................................................................................................2111.001.00------1.00-
..................................................................................................AGCGCCTGACCCGGGCCTG.........................................................................................................................................................................................................................................1911.001.001.00-------
..............................................................................TGAACACACGGCGACTGC..............................................................................................................................................................................................................................................................1811.001.00--1.00-----
.....................................................................AGCGGCGCCTGAACACACGGC....................................................................................................................................................................................................................................................................2111.001.00----1.00---
...................................................CGGATGTCGATGTGAGCGAGCGGCGCC................................................................................................................................................................................................................................................................................2711.001.00-----1.00--
..............................AGGAGGAAGCGGTGGCTG..............................................................................................................................................................................................................................................................................................................1811.001.00---1.00----
.............................................................................................................CGGGCCTGCGCCAGAGCC...............................................................................................................................................................................................................................1811.001.00---1.00----
.....................................................GATGTCGATGTGAGC..........................................................................................................................................................................................................................................................................................1520.500.50--0.50-----

Antisense strand
CGGCGAAGGGCCGTGGGGGAAGGGGCAGGGAGGAGGAAGCGGTGGCTGCTGCGGATGTCGATGTGAGCGAGCGGCGCCTGAACACACGGCGACTGCCGAGCGCCTGACCCGGGCCTGCGCCAGAGCCTGCACCGAGCTCCGAGGCCCCACACCCGCTAGGGTGGCCCTGCGCCCGTTGCTAGTGAGGCGGCGTGCTCTGCATTCTTCGCTGTCCAGGCCTGTCGGCTTTGGTGTCTGCTGGCTCCTCCTTGCTCGCCTGCTCACTCCTGCTTGCCTGAGTCACCGCCGCCGCCGCTGCAGCCATGGCCGAGAGTGGTGAAAGCGGCGGTCCTCCGGGCTCCCAGGATAGC
...................................................((((..(((.(((..((....(((((.........((((....))))...(((((...)))))..)))))...))..))).)))..)))).................................................................................................................................................................................................................
..................................................51.............................................................................................146..........................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553605(SRX182811)
source: Frontal Cortex. (Frontal Cortex)		SRR553577(SRX182783)
source: Frontal Cortex. (Frontal Cortex)		SRR553580(SRX182786)
source: Kidney. (Kidney)		SRR553578(SRX182784)
source: Cerebellum. (Cerebellum)		SRR553579(SRX182785)
source: Heart. (Heart)		SRR553606(SRX182812)
source: Kidney. (Kidney)		SRR553581(SRX182787)
source: Testis. (testes)		SRR553607(SRX182813)
source: Testis. (testes)
....................................................................................................................................................................................................................................................................................ggtGCGGCGGCGGTGATGG....................................................... 191.000.00------1.00-
....................................................................................................................................................................................................................................................................................aggtGCGGCGGCGGTGTGGA...................................................... 201.000.00-1.00------
..................................................................................................................................................................................................................................................cctAGGCGAGCAAGGATCC......................................................................................... 191.000.00-------1.00
....................................................................................................................................................................................................................................................................................................................................TATCCTGGGAGCCCGGAGGACCGC.. 2411.001.00------1.00-
........................................................................................................................................................................................................................................................................................agggAGCGGCGGCGGCGGGA.................................................. 201.000.00--1.00-----