ID: rheMac3_genscan_chr11.143_30
GENE: Other-SCARNA11(31)
chr11:6786027-6786387-


Display Libraries
(1)
HEART 		(2)
KIDNEY 		(3)
OTHER 		(2)
TESTES

Sense strand
CACTCCAGGGGATACGCAGCCCAACACTCCTGCACCTGCCCCACCTGCTGGTAAGTCTGCCTGTCCTATCATTTTCTGTCCCTCTCTTTTTGTCCTGGCCTATTTTTCTGCTCCCCTGTGCTCAGTTCTAACAGGGTAGTCTGGCAGGACACACAGTAATTTCCCTCTCAGTTTAGGAGGGCCGTCCTAAGAATGGGGCTGGCTCTTAAAGGCACGAGAGGACAGTTTAAGATGAGACAAACTGGGAAGAAATGACCTTCTCTCTGATGTAGGACCTTCTTCCTAATTGATTGTCTCTTATTGTTCTGCAGAAGATGGGATCAAAATAGAGGAAAATAGCCTCAAAGAAGAAGAGAGCATA
..........................................................................................((((((.(((.........(((.((((((...........)))))).)))..)))))))))............((((((.((((..(((((((((((((....)))))).)))))))..))))..))))))............................................................................................................................................
...................................................................................84.................................................................................................................................................231................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553577(SRX182783)
source: Frontal Cortex. (Frontal Cortex)		SRR553605(SRX182811)
source: Frontal Cortex. (Frontal Cortex)		SRR553581(SRX182787)
source: Testis. (testes)		SRR553578(SRX182784)
source: Cerebellum. (Cerebellum)		SRR553579(SRX182785)
source: Heart. (Heart)		SRR553580(SRX182786)
source: Kidney. (Kidney)		SRR553606(SRX182812)
source: Kidney. (Kidney)		SRR553607(SRX182813)
source: Testis. (testes)
................................................................................................................................................................................................ATGGGGCTGGCTCTTAAAGGCACGAGAGGACAGT.......................................................................................................................................34166.0066.0027.0015.009.003.006.001.002.003.00
........................................................................................................................................................................................................GGCTCTTAAAGGCACGAGAGGACAGTT......................................................................................................................................27150.0050.0011.0012.001.0018.002.004.002.00-
..........................................................................................................................................................................................................CTCTTAAAGGCACGAGAGGACAGTT......................................................................................................................................25139.0039.001.002.0024.005.001.003.001.002.00
.................................................................................................................................................................................................TGGGGCTGGCTCTTAAAGGCACGAGAGGACAGTT......................................................................................................................................34135.0035.0017.004.002.001.008.001.002.00-
..................................................................................................................................................................................................GGGGCTGGCTCTTAAAGGCACGAGAGGACAGTT......................................................................................................................................33125.0025.009.007.002.00-3.002.00-2.00
................................................................................................................................................................................................ATGGGGCTGGCTCTTAAAGGCACGAGAGGACAG........................................................................................................................................33123.0023.005.005.007.00-1.00-2.003.00
....................................................................................................................................................................................................................CACGAGAGGACAGTT......................................................................................................................................15120.0020.00-3.003.002.006.002.003.001.00
........................................................................................TTTGTCCTGGCCTATTTTTCTGC..........................................................................................................................................................................................................................................................23114.0014.007.003.00-2.00-2.00--
................................................................................................................................................................................................ATGGGGCTGGCTCTTAAAGGCACGAGAGGACA.........................................................................................................................................32113.0013.00-2.0010.001.00----
.......................................................................................................................................................................................................TGGCTCTTAAAGGCACGAGAGGACAGTT......................................................................................................................................2819.009.004.001.00-1.002.00--1.00
.........................................................................................................................................................................................................GCTCTTAAAGGCACGAGAGGACAGTT......................................................................................................................................2617.007.00-1.00-3.00-3.00--
...............................................................................................................................................................................................................AAAGGCACGAGAGGACAGTT......................................................................................................................................2014.004.00-1.00-3.00----
........................................................................................................................................................................................................GGCTCTTAAAGGCACGAGAGGACAGT.......................................................................................................................................2614.004.001.00-1.00-1.001.00--
..................................................................................................................................................................................................GGGGCTGGCTCTTAAAGGCACGAGAGGACAGT.......................................................................................................................................3214.004.001.002.00-1.00----
.....................................................................................................................................................................................................................ACGAGAGGACAGTTTA....................................................................................................................................1613.003.00------3.00-
...........................................................................................................................................................................................................TCTTAAAGGCACGAGAGGACAGTT......................................................................................................................................2413.003.00---2.001.00---
........................................................................................................................................................................................................GGCTCTTAAAGGCACGAGAGGACAGTA......................................................................................................................................273.004.002.001.00------
................................................................................................................................................................................................ATGGGGCTGGCTCTTAAAGGC....................................................................................................................................................2113.003.002.00---1.00---
.........................................................................................TTGTCCTGGCCTATTTTTCTGCT.........................................................................................................................................................................................................................................................2313.003.001.001.001.00-----
................................................................................................................................................................................................ATGGGGCTGGCTCTTAAAGGCACGAGAGGACATT.......................................................................................................................................342.0013.002.00-------
.................................................................................................................................................................................................................AGGCACGAGAGGACAGTT......................................................................................................................................1812.002.00----2.00---
..............................................................................................................................................................................................GAATGGGGCTGGCTCTTAAAGGCACGA................................................................................................................................................2712.002.00-2.00------
...............................................................................................................................................................................................AATGGGGCTGGCTCTTAAAGGC....................................................................................................................................................2212.002.00-1.00---1.00--
...............................................................................................................................................GCAGGACACACAGTAATTTCCCTCTCAG..............................................................................................................................................................................................2812.002.00------2.00-
................................................................................................................................................................................................ATGGGGCTGGCTCTTAAAGGCACGAGAGGACAGA.......................................................................................................................................342.0023.00-1.00---1.00--
........................................................................................TTTGTCCTGGCCTATTTTTCTGCT.........................................................................................................................................................................................................................................................2412.002.001.001.00------
...................................................................................................................................................................................................GGGCTGGCTCTTAAAGGCACGAGAGGACAGTT......................................................................................................................................3212.002.001.00--1.00----
........................................................................................................................................................................................................GGCTCTTAAAGGCACGAGAGGACAG........................................................................................................................................2512.002.001.001.00------
.....................................................................................................................................................................................................GCTGGCTCTTAAAGGCACGAGAGGACAGT.......................................................................................................................................2912.002.00------2.00-
..................................................................................................................................................................................................................GGCACGAGAGGACAGTT......................................................................................................................................1712.002.00----2.00---
.............................................................................................................................................................................................AGAATGGGGCTGGCTCTTAAA.......................................................................................................................................................2112.002.002.00-------
...........................................................................................................................................................................TTTAGGAGGGCCGTCCTAAGAATGGGGCTGG...............................................................................................................................................................3112.002.00-2.00------
................................................................................................................................................................................................................AAGGCACGAGAGGACAGTT......................................................................................................................................1912.002.00--1.00--1.00--
................................................................................................................................................................................................ATGGGGCTGGCTCTTAAAGGCACGAGAGGAC..........................................................................................................................................3112.002.00--1.00----1.00
................................................................................................................................................................................................................AAGGCACGAGAGGACAGT.......................................................................................................................................1812.002.00-1.001.00-----
.....................................................................................................................................................................................................................ACGAGAGGACAGTTTT....................................................................................................................................162.000.00-1.00-1.00----
.............................................................................................................................................................................................AGAATGGGGCTGGCTCT...........................................................................................................................................................1711.001.001.00-------
........................................................................................................................................................................................................GGCTCTTAAAGGCACGAGAGGACAGGT......................................................................................................................................271.002.00---1.00----
..........................................................................................................................................................................................................CTCTTAAAGGCACGAGAGGACAGT.......................................................................................................................................2411.001.00-------1.00
.........................................................................................TTGTCCTGGCCTATTTTTCTCT..........................................................................................................................................................................................................................................................221.000.00-1.00------
.....................................................................................................................................................................................................GCTGGCTCTTAAAGGCACGAGAGGACAGTT......................................................................................................................................3011.001.001.00-------
................................................................................................................................................................................................ATGGGGCTGGCTCTTAAAGGCACGAGAGGATTT........................................................................................................................................331.000.00-1.00------
..........................................................................................................................................................................................CTAAGAATGGGGCTGGC..............................................................................................................................................................1711.001.001.00-------
..............................................................................................................................................................................................................TAAAGGCACGAGAGGACAGTT......................................................................................................................................2111.001.00-1.00------
..................................................................................................................................................................................................GGGGCTGGCTCTTAAAGGCACGAGAGGACAGGT......................................................................................................................................331.001.001.00-------
..................................................................................................................................................................................................GGGGCTGGCTCTTAAAGGCACGAGAGGACAG........................................................................................................................................3111.001.00-------1.00
.....................................................................................................................GTGCTCAGTTCTAACAGGGTAG..............................................................................................................................................................................................................................2211.001.00----1.00---
.......................................................................................TTTTGTCCTGGCCTATTTTTCTG...........................................................................................................................................................................................................................................................2311.001.00---1.00----
...............................................................................................................................................................................................AATGGGGCTGGCTCTTAAAGGCA...................................................................................................................................................2311.001.00-1.00------
.................................................................................................................................................AGGACACACAGTAATTTCCCTCTCAG..............................................................................................................................................................................................2611.001.001.00-------
....................................................................................................................................................................................................................CACGAGAGGACAGTTAA....................................................................................................................................171.0020.00-1.00------
....................................................................................................................................................................................................................CACGAGAGGACAGTTTA....................................................................................................................................1711.001.00------1.00-
.............................................................................................................................TTCTAACAGGGTAGTCTGG.........................................................................................................................................................................................................................1911.001.00-----1.00--
................................................................................................................................................................................................ATGGGGCTGGCTCTTAAAGGG....................................................................................................................................................211.000.001.00-------
.................................................................................................................................................................................................................AGGCACGAGAGGACAGTTT.....................................................................................................................................1911.001.00-----1.00--
.........................................................................................TTGTCCTGGCCTATTTTTCTGC..........................................................................................................................................................................................................................................................2211.001.00-1.00------
......................................................................................................................................................................................................CTGGCTCTTAAAGGCACGAGAGGACAGTT......................................................................................................................................2911.001.00----1.00---
..................................................................................................................................................................................................GGGGCTGGCTCTTAAAGGC....................................................................................................................................................1911.001.00------1.00-
..............................................................................................................................................................................AGGAGGGCCGTCCTAAGAATGGGGCTGG...............................................................................................................................................................2811.001.001.00-------
............................................................................................................................................................................................................CTTAAAGGCACGAGAGGACAGTT......................................................................................................................................2311.001.00------1.00-
................................................................................................................................................................................................ATGGGGCTGGCTCTTAAAGGCACGAGAGGTCA.........................................................................................................................................321.000.00--1.00-----
....................................................................................................................................................................................................GGCTGGCTCTTAAAGGCACGAGAGGACAGT.......................................................................................................................................3011.001.00--1.00-----
.............................................................................................................................................................................................AGAATGGGGCTGGCTCTTAAAG......................................................................................................................................................2211.001.001.00-------
.............................................................................................................................................................................TAGGAGGGCCGTCCTAAGAATGGGGCTGG...............................................................................................................................................................2911.001.00---1.00----
........................................................................................TTTGTCCTGGCCTATTTTTCTGCTCCCCTGTG.................................................................................................................................................................................................................................................3211.001.001.00-------
.....................................................................................................................................GGGTAGTCTGGCAGGA....................................................................................................................................................................................................................1611.001.001.00-------
................................................................................................................................................................................................ATGGGGCTGGCTCTTAAAGGCACGAGAGGACTT........................................................................................................................................331.002.00--1.00-----
............................................................................................................................................................................TTAGGAGGGCCGTCCTAAGAATGGGGCTGG...............................................................................................................................................................3011.001.00---1.00----
.................................................................................................................................................................................................TGGGGCTGGCTCTTAAAGGCA...................................................................................................................................................2111.001.00-1.00------
................................................................................................................................................................................................ATGGGGCTGGCTCTTAAAGGCACGAGAGGATAG........................................................................................................................................331.000.00-------1.00
........................................................................................TTTGTCCTGGCCTATTTTTCTG...........................................................................................................................................................................................................................................................2211.001.00-----1.00--
.............................................................................................................................................................................................................TTAAAGGCACGAGAGGACAGTTT.....................................................................................................................................2311.001.00-1.00------
................................................................................................................................................................................................ATGGGGCTGGCTCTTAAAGGCACGAGAGGACAA........................................................................................................................................331.0013.00-------1.00
................................................................................................................................................................................................ATGGGGCTGGCTCTTAAAGGCACGAGAGGACAGC.......................................................................................................................................341.0023.00-1.00------
...............................................................................................................................................................................................AATGGGGCTGGCTCTTAAAGGCACGAGAGGA...........................................................................................................................................3111.001.001.00-------
..........................................................................................................................CAGTTCTAACAGGGTAGTCTG..........................................................................................................................................................................................................................2111.001.001.00-------
.................................................................................................................................................................................................TGGGGCTGGCTCTTAAAGGCACGAGAGGACATTT......................................................................................................................................341.000.001.00-------
.........................................................................................TTGTCCTGGCCTATTTTTCTGCTC........................................................................................................................................................................................................................................................2411.001.00-1.00------
....................................................................................................................................AGGGTAGTCTGGCAGGACAC.................................................................................................................................................................................................................2011.001.00----1.00---
............................................................................................................................GTTCTAACAGGGTAGTCTGGCA.......................................................................................................................................................................................................................2211.001.00-1.00------
...........................................................................................................................AGTTCTAACAGGGTAGTCTGGCAGG.....................................................................................................................................................................................................................2511.001.00--1.00-----
...........................................................................................................................................................................................................TCTTAAAGGCACGAGAGGGCAG........................................................................................................................................221.000.00--1.00-----
........................................................................................TTTGTCCTGGCCTATTTTTCTGCTC........................................................................................................................................................................................................................................................2511.001.001.00-------
............................................................................................................................GTTCTAACAGGGTAGTCTGGCAG......................................................................................................................................................................................................................2311.001.00-1.00------
.................................................................................................................................................................TCCCTCTCAGTTTAGGAGGGC...................................................................................................................................................................................2111.001.001.00-------
........................................................................................TTTGTCCTGGCCTATT.................................................................................................................................................................................................................................................................1650.800.800.40--0.20-0.20--
...........................................................................................................................................................................................TAAGAATGGGGCTGGC..............................................................................................................................................................1630.670.670.330.33------
..........................................................................................................................................................................................CTAAGAATGGGGCTGG...............................................................................................................................................................1630.330.33-0.33------
.........................................................................................TTGTCCTGGCCTATT.................................................................................................................................................................................................................................................................1570.290.29--0.29-----
........................................................................................TTTGTCCTGGCCTAT..................................................................................................................................................................................................................................................................1560.170.17-----0.17--
..................................................................................................................................................................................................GGGGCTGGCTCTTAA........................................................................................................................................................1560.170.170.17-------
...........................................................................................................................................................................................TAAGAATGGGGCTGG...............................................................................................................................................................1590.110.110.11-------

Antisense strand
CACTCCAGGGGATACGCAGCCCAACACTCCTGCACCTGCCCCACCTGCTGGTAAGTCTGCCTGTCCTATCATTTTCTGTCCCTCTCTTTTTGTCCTGGCCTATTTTTCTGCTCCCCTGTGCTCAGTTCTAACAGGGTAGTCTGGCAGGACACACAGTAATTTCCCTCTCAGTTTAGGAGGGCCGTCCTAAGAATGGGGCTGGCTCTTAAAGGCACGAGAGGACAGTTTAAGATGAGACAAACTGGGAAGAAATGACCTTCTCTCTGATGTAGGACCTTCTTCCTAATTGATTGTCTCTTATTGTTCTGCAGAAGATGGGATCAAAATAGAGGAAAATAGCCTCAAAGAAGAAGAGAGCATA
..........................................................................................((((((.(((.........(((.((((((...........)))))).)))..)))))))))............((((((.((((..(((((((((((((....)))))).)))))))..))))..))))))............................................................................................................................................
...................................................................................84.................................................................................................................................................231................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553577(SRX182783)
source: Frontal Cortex. (Frontal Cortex)		SRR553605(SRX182811)
source: Frontal Cortex. (Frontal Cortex)		SRR553581(SRX182787)
source: Testis. (testes)		SRR553578(SRX182784)
source: Cerebellum. (Cerebellum)		SRR553579(SRX182785)
source: Heart. (Heart)		SRR553580(SRX182786)
source: Kidney. (Kidney)		SRR553606(SRX182812)
source: Kidney. (Kidney)		SRR553607(SRX182813)
source: Testis. (testes)
.....................................................................................................................................................................................................................................................................................................tcgaCAGAACAATAAAGCT................................................. 192.000.00--2.00-----
.........................................................................................................TAGAACTGAGCACAGGGGAGCAGAA....................................................................................................................................................................................................................................... 2511.001.00-------1.00
.....................................TAGGACAGGCAGACTTACCAGCAGGTGGGGC..................................................................................................................................................................................................................................................................................................... 3111.001.00-------1.00
....................................................................................................................................................................gccCTCCTAAACTGACCG................................................................................................................................................................................... 181.000.00-1.00------
...........................................TGATAGGACAGGCAGACTTACCAGCAGG.................................................................................................................................................................................................................................................................................................. 2811.001.00--1.00-----
..............................................GAAAATGATAGGACAGGCAGACTTACCAGC............................................................................................................................................................................................................................................................................................. 3011.001.00--1.00-----
.....................................................................................................................GTTAGAACTGAGCAC..................................................................................................................................................................................................................................... 1580.120.12----0.12---