| Gene: Rbmy1a1 | ID: uc009uzq.1_intron_1_0_chrY_2088971_f | SPECIES: mm9 |
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(4) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(2) PIWI.mut |
(20) TESTES |
| AGAATAATATTATGTATCATTCTACAGTAAACAGCATACATCTCATCAGTGTGAGTATTTTTAAGTGAAAAAGAATAAAGTTTAGTAATTACAACCTTTCCCATACTTAATAAAAACTAGACCTGTTACAGTATGCTAATTGACCTTTTGCTTTCTTTCATTAAACAGTGCTGCACACCAGTAAGCTGAGTGGTAGATGTGTAGAAGCAAGAAGGGCCAGTTTCAGCTAAATAGAAAACGGTCATAAATAAAAAGGGGAAGGAAAAAACATTAGGATGTCAGGCTCTGTGGTTCCCTTTAGTTGTATTTTCTTATGTATATGAATCTTTTGTCTGCATATATGTCTGTGCAACATGTATTATATGATGTTCGTATGTGGAAGGCAGCAGTCCCCTTGAGCTGGAATTACTTTGAACCACCATGTATGTTGTTCTGGGAATCAGATCTCAATCTTCTGGAAGGGCAGTCAGTGTTCTTTAACTGAGCTATTTGTCCAGCTTTAAAAGTTTTAAGCATGCTATTTTATCCTTTTCTCTACTTATAGAAAAATGGCAGAAACTAATCAGCCTGGGAAAATTTTTATAGGAGGCCTCA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesWT4() Testes Data. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................TACTTAATAAAAACTAGACCTGTTACAGTATGCTAATTGACCTTTTGCTTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 52 | 6 | 24.17 | 24.17 | 24.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................TATGATGTTCGTATGTGGAAGGCAGC............................................................................................................................................................................................................... | 26 | 6 | 1.00 | 1.00 | - | - | - | - | - | - | 0.83 | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGATCTCAATCTTagt......................................................................................................................................... | 19 | agt | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TAAGCTGAGTGGTAGATGTGTgg...................................................................................................................................................................................................................................................................................................................................................................................................... | 23 | gg | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TAAGCTGAGTGGTAGATGTGTAGAAGCAt................................................................................................................................................................................................................................................................................................................................................................................................ | 29 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCAGCCTGGGAAAATTTTTATAGGt....... | 28 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCAGCCTGGGAAAATTTTTATAG......... | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCCTGGGAAAATTTTTATAGGAGGC.... | 28 | 6 | 0.33 | 0.33 | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TAAGCTGAGTGGTAGATGTGTAGAAGC.................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 6 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | 0.17 | - | - | - |
| ..........................................................................................................................................................................................TGAGTGGTAGATGTGTAGAAGCAAGA.............................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 6 | 0.17 | 0.17 | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................GTGGTAGATGTGTAGAAGCAAGAAGGGCC........................................................................................................................................................................................................................................................................................................................................................................................ | 29 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................GATGTTCGTATGTGGAAGGCA................................................................................................................................................................................................................. | 21 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................TAGATGTGTAGAAGCAAGAAG............................................................................................................................................................................................................................................................................................................................................................................................ | 21 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................TGCTGCACACCAGTAAGCTGAGTGGT................................................................................................................................................................................................................................................................................................................................................................................................................ | 26 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................GAGTGGTAGATGTGTAGAAGCAAGAAG............................................................................................................................................................................................................................................................................................................................................................................................ | 27 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................GTGCAACATGTATTATATGATGTTCGT............................................................................................................................................................................................................................. | 27 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTATAGGAGGCCTCA | 18 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - |
| .................................................................................................................................................................................................TAGATGTGTAGAAGCAAGAAGGGCC........................................................................................................................................................................................................................................................................................................................................................................................ | 25 | 6 | 0.17 | 0.17 | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................TAGATGTGTAGAAGCAAGAAGGGCCAG...................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGAAAATTTTTATAGGAGGCCTCA | 26 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - |
| .............................................................................................................................................................................CACACCAGTAAGCTGAGTGGTAGATGTGTAGA..................................................................................................................................................................................................................................................................................................................................................................................................... | 32 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................TGATGTTCGTATGTGGAAGGCAGCAGT............................................................................................................................................................................................................ | 27 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................TAGGATGTCAGGCTCTG.................................................................................................................................................................................................................................................................................................................. | 17 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - |
| AGAATAATATTATGTATCATTCTACAGTAAACAGCATACATCTCATCAGTGTGAGTATTTTTAAGTGAAAAAGAATAAAGTTTAGTAATTACAACCTTTCCCATACTTAATAAAAACTAGACCTGTTACAGTATGCTAATTGACCTTTTGCTTTCTTTCATTAAACAGTGCTGCACACCAGTAAGCTGAGTGGTAGATGTGTAGAAGCAAGAAGGGCCAGTTTCAGCTAAATAGAAAACGGTCATAAATAAAAAGGGGAAGGAAAAAACATTAGGATGTCAGGCTCTGTGGTTCCCTTTAGTTGTATTTTCTTATGTATATGAATCTTTTGTCTGCATATATGTCTGTGCAACATGTATTATATGATGTTCGTATGTGGAAGGCAGCAGTCCCCTTGAGCTGGAATTACTTTGAACCACCATGTATGTTGTTCTGGGAATCAGATCTCAATCTTCTGGAAGGGCAGTCAGTGTTCTTTAACTGAGCTATTTGTCCAGCTTTAAAAGTTTTAAGCATGCTATTTTATCCTTTTCTCTACTTATAGAAAAATGGCAGAAACTAATCAGCCTGGGAAAATTTTTATAGGAGGCCTCA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesWT4() Testes Data. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAACTAATCAGaggt............................ | 18 | aggt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................AGTAATTACAACCTTTCCCATACTTAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - |
| ...................TTCTACAGTAAACAGCATACAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 22 | 6 | 0.17 | 0.17 | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TCTACAGTAAACAGCATACATCTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGTGTTCTTTAAC................................................................................................................. | 16 | 15 | 0.07 | 0.07 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.07 | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGTTCTTTAACTG............................................................................................................... | 16 | 16 | 0.06 | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.06 |