| Gene: 4932441K18Rik | ID: uc009uui.1_intron_8_0_chrX_159249321_r | SPECIES: mm9 |
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(4) OTHER.mut |
(4) PIWI.ip |
(2) PIWI.mut |
(15) TESTES |
| GCACAATGGAAGAAGCTAGAATTTGTGGGTTAGGAGTAAAAGCAGACATGGTATGTAACTCTCAAGCAAATGATATTCTTCAACATCAAGACCCCAGTTGTGGTGGCACAACTAAGAAACATTCACTGGAAGGGGATGAAGGCAGTGACTTTATTACAAAGAACAGAAATTTGGTGAGCTCAGTATTCTGTACACAGGAGAAAAGAGAAGAAATTCCTGGACGAGAAGCTCGAACAGGTCCTCCTGA ...........................................................((((..((...(((......)))...(((...((((.((((((....))))))...((.....)).......)))).)))..)).(((.((((.....)))).((((((..((((.....))))..)))))).)))..)))).............................................. ...........................................44..............................................................................................................................................................204......................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
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| ................................................TGGTATGTAACTCTCAAGCAAATGATATTC......................................................................................................................................................................... | 30 | 1 | 5.00 | 5.00 | 2.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................GACATGGTATGTAACTCTCAAGCAAATGA.............................................................................................................................................................................. | 29 | 1 | 3.00 | 3.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TGGTATGTAACTCTCAAGCAAATGATATT.......................................................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................GACATGGTATGTAACTCTCAAGCAAATG............................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................GGTATGTAACTCTCAAGCAAATGATATTC......................................................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................TAAAAGCAGACATGGTATGTAACTCTCA....................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................CATGGTATGTAACTCTCAAGCAAATGATA............................................................................................................................................................................ | 29 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................AAGAGAAGAAATTCCTGGACGAGAAGCT................. | 28 | 2 | 1.50 | 1.50 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGAGCTCAGTATTCTGTACACAGGAG............................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................................................GGAAGGGGATGAAGGCAGTGACTTTATT............................................................................................ | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTATGTAACTCTCAAGCAAATGATATTC......................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................ATGGTATGTAACTCTCAAGCAAATGATA............................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTATGTAACTCTCAAGCAAATG............................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................................................................................AAGGCAGTGACTTTATTACAAAGAACAG................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................................................................................TTGGTGAGCTCAGTATTCTG......................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................................AAAAGCAGACATGGTATGTAACTC.......................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................CAACTAAGAAACATTCACTGGAAGGGGtt.............................................................................................................. | 29 | tt | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GTGACTTTATTACAAAGAAC................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................................CTGGAAGGGGATGAAGGCAGTGA................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..............................................................................................................ACTAAGAAACATTCACTGGAAGGGGATt............................................................................................................. | 28 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................TGGTATGTAACTCTCAAGCAAATGATAT........................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................CATGGTATGTAACTCTCAAGCAAATGA.............................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................TGTAACTCTCAAGCAAATGATATTCTT....................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTATGTAACTCTCAAGCAAATGATATTCT........................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................GGTATGTAACTCTCAAGCAAATGATATTCT........................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................TTACAAAGAACAGAAATTTGGTGAGCTCt................................................................. | 29 | t | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................CAAAGAACAGAAATTTGGTGAGCTCAGT............................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................AAGCAGACATGGTATGTAACTCTCAA...................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................AGGAGTAAAAGCAGACATGGTATGTAACTC.......................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................AAAAGCAGACATGGTATGTAACTCTC........................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TGTGGGTTAGGAGTAAAAGCAGACATG..................................................................................................................................................................................................... | 27 | 2 | 1.00 | 1.00 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................GTAAAAGCAGACATGGTATGTAACTCTCAAGCAA.................................................................................................................................................................................. | 34 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................CAAAGAACAGAAATTTGGTGAGCTCA................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................CATGGTATGTAACTCTCAAGCAAATGATAT........................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TATGTAACTCTCAAGCAAATGATATTC......................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................GAATTTGTGGGTTAGGAGTAAAAGC............................................................................................................................................................................................................ | 25 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ................................................................................................................................................................................................................AGAAATTCCTGGACGAGAAGCTCG............... | 24 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| ................TAGAATTTGTGGGTTAGGAGTAAAAGC............................................................................................................................................................................................................ | 27 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................GTGGGTTAGGAGTAAAAGCAGACATG..................................................................................................................................................................................................... | 26 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........AGAAGCTAGAATTTGTGGGTTAGGAGTA................................................................................................................................................................................................................. | 28 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................TTGTGGGTTAGGAGTAAAAGCAGACA....................................................................................................................................................................................................... | 26 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| GCACAATGGAAGAAGCTAGAATTTGTGGGTTAGGAGTAAAAGCAGACATGGTATGTAACTCTCAAGCAAATGATATTCTTCAACATCAAGACCCCAGTTGTGGTGGCACAACTAAGAAACATTCACTGGAAGGGGATGAAGGCAGTGACTTTATTACAAAGAACAGAAATTTGGTGAGCTCAGTATTCTGTACACAGGAGAAAAGAGAAGAAATTCCTGGACGAGAAGCTCGAACAGGTCCTCCTGA ...........................................................((((..((...(((......)))...(((...((((.((((((....))))))...((.....)).......)))).)))..)).(((.((((.....)))).((((((..((((.....))))..)))))).)))..)))).............................................. ...........................................44..............................................................................................................................................................204......................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
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