| Gene: BC100492 | ID: uc009tyg.1_intron_1_0_chrX_98990524_f.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(4) PIWI.ip |
(3) PIWI.mut |
(17) TESTES |
| TGTCCATATTCCCCCTTCTGTACTGTCCAGTGCTACCTGGGGAGTCAGCTCAGGCATGGAAAGGCAGGCTTCAGGAGAACAGGAAAGCTCTTTGGCTAAGAAAAAGCCAAATATGGTCTGGGGCAAAGAAGGGAGCAGGCCCAGCCACCATGGAGTGACTGCAGCTGCTGCCACCGCCTCTGCTGCTGCCCCTGCCTCAGCTTCTACAGCTTCAGGTGCCCTGCCCAAGACCAGTCCCAAAAAGAAGCAA ..................................................(((.(((((...(((..((..((((......(((....)))((((((.......))))))......))))..))......(((......))).))).)))))..((....))..)))................................................................................... ..................................................51...................................................................................................................168................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT3() Testes Data. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................TGGAAAGGCAGGCTTCAGGAGAACAGG....................................................................................................................................................................... | 27 | 1 | 22.00 | 22.00 | 9.00 | 10.00 | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................TGGAAAGGCAGGCTTCAGGAGAACAG........................................................................................................................................................................ | 26 | 1 | 10.00 | 10.00 | 2.00 | 4.00 | - | 2.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................TGGAAAGGCAGGCTTCAGGAGAACA......................................................................................................................................................................... | 25 | 1 | 4.00 | 4.00 | - | - | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ........................................................TGGAAAGGCAGGCTTCAGGAGAACAGGA...................................................................................................................................................................... | 28 | 1 | 3.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ........................................................TGGAAAGGCAGGCTTCAGGAGAACAGGt...................................................................................................................................................................... | 28 | t | 2.00 | 22.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................GAAAGGCAGGCTTCAGGAGAACAGGA...................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................ACAGGAAAGCTCTTTGGCTAAGAAAAAG................................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................TGGAGTGACTGCAGCTGCTG................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................CAAATATGGTCTGGGGCAAAGAAGGG..................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................ACAGGAAAGCTCTTTGGCTAAGAAAAAGC............................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................GGAGTCAGCTCAGGCATGGAAAGGCAG....................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................CAGGAGAACAGGAAAGCTCTTTGGCTA........................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................CCATGGAGTGACTGCAGCTGCTGCCACC........................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................TGGAAAGGCAGGCTTCAGGAGAACAGGtt..................................................................................................................................................................... | 29 | tt | 1.00 | 22.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................TGGAAAGGCAGGCTTCAGGAGAACAGa....................................................................................................................................................................... | 27 | a | 1.00 | 10.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................TTCAGGAGAACAGGAAAGCTCTTTGtcta........................................................................................................................................................ | 29 | tcta | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................TGGAAAGGCAGGCTTCAGGAGAAaagg....................................................................................................................................................................... | 27 | aagg | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................TGGAAAGGCAGGCTTCAGGAGAACAGtt...................................................................................................................................................................... | 28 | tt | 1.00 | 10.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................GGAAAGCTCTTTGGCTAAGAAAAAGCCAt............................................................................................................................................ | 29 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................................................................................................................................................................................TACAGCTTCAGGTGCCCTGCCCAAtta................... | 27 | tta | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................TGCCCAAGACCAGTCCCAAAAAGAAGCA. | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TCTGTACTGTCCAGTGCTACCTGGGG................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................ATGGTCTGGGGCAAAGAAGG...................................................................................................................... | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| TGTCCATATTCCCCCTTCTGTACTGTCCAGTGCTACCTGGGGAGTCAGCTCAGGCATGGAAAGGCAGGCTTCAGGAGAACAGGAAAGCTCTTTGGCTAAGAAAAAGCCAAATATGGTCTGGGGCAAAGAAGGGAGCAGGCCCAGCCACCATGGAGTGACTGCAGCTGCTGCCACCGCCTCTGCTGCTGCCCCTGCCTCAGCTTCTACAGCTTCAGGTGCCCTGCCCAAGACCAGTCCCAAAAAGAAGCAA ..................................................(((.(((((...(((..((..((((......(((....)))((((((.......))))))......))))..))......(((......))).))).)))))..((....))..)))................................................................................... ..................................................51...................................................................................................................168................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT3() Testes Data. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
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| ................................................................................................AAAAAGCCAAATATaagg........................................................................................................................................ | 18 | aagg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................CCCTGCCTCAGCTTCacag.............................................. | 19 | acag | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................GAGCAGGCCCAGCCAgct....................................................................................................... | 18 | gct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..CCATATTCCCCCTTCTGTACTGTCCAt............................................................................................................................................................................................................................. | 27 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |