| Gene: Pja1 | ID: uc009tvk.1_intron_0_0_chrX_96662913_r.3p | SPECIES: mm9 |
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(6) OTHER.mut |
(6) PIWI.ip |
(2) PIWI.mut |
(17) TESTES |
| GAGAGGGAGAGGCAGAATTTACCAGCTCGTCCTAGCAGGGCTCCTGTGAGTATTTGTGGTGGTGGGGAAAACACCCCAAAGAGTGCCGAGGAACCGGTGGTGAGACCCAAAGTCCGGAATGTGGCGACTCCAAACTGCATGAAACCCAAAGTGTTTTTTGATACTGATGATGATGATGATGTACCACACAGTACTTCCAGGTGGCGGGATGCTGCCGATGCTGAGGAGGCTCATGCCGAGGGCCTAGCCA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) |
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| ............................................................................................................................................................TTTGATACTGATGATGATGATGATGT.................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TGATACTGATGATGATGATGATGTAC.................................................................. | 26 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TGATACTGATGATGATGATGATGTACC................................................................. | 27 | 1 | 3.00 | 3.00 | - | - | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................AAAGTCCGGAATGTGGCGACTCCAAACTGC................................................................................................................ | 30 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................TACTGATGATGATGATGATGTACCACACA............................................................ | 29 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TGCCGATGCTGAGGAGGCTCATGCCta........... | 27 | ta | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TGCTGCCGATGCTGAGGAGGCTCATGCCGt........... | 30 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................................................GATGATGATGATGATGTACCACACAGT.......................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................ATTTGTGGTGGTGGGGgact................................................................................................................................................................................... | 20 | gact | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGGTGAGACCCAAAGTCCGGAATGTGGCGA........................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .......................................................................................................................................................................TGATGATGATGATGTACCACACAGTAC........................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................CCCAAAGTCCGGAATGTGGCGACTCCAAACTGC................................................................................................................ | 33 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TACCACACAGTACTTCCAGGTGGCGGGATGt...................................... | 31 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................................................................................................TGATGATGATGATGTACCACACAGTA......................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................CAGTACTTCCAGGTGGCGGGATGCT..................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................................................................................................................................................................................................TGCTGCCGATGCTGAGGAGGCTCATGCC............. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................ACTTCCAGGTGGCGGGATGCTGCCGAT............................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .................................................................................................................................................................TACTGATGATGATGATGATGTACCACAC............................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TGCTGCCGATGCTGAGGAGGCTCATG............... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................TACTGATGATGATGATGATGTACCACA.............................................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TGCCGATGCTGAGGAGGCTCATGCCGAG.......... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TGCTGCCGATGCTGAGGAGGCTCATGa.............. | 27 | a | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................CCTAGCAGGGCTCCTGTGA......................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................TTTGATACTGATGATGATGATGATG..................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................ATGATGATGATGATGTAC.................................................................. | 18 | 7 | 0.29 | 0.29 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.29 |
| GAGAGGGAGAGGCAGAATTTACCAGCTCGTCCTAGCAGGGCTCCTGTGAGTATTTGTGGTGGTGGGGAAAACACCCCAAAGAGTGCCGAGGAACCGGTGGTGAGACCCAAAGTCCGGAATGTGGCGACTCCAAACTGCATGAAACCCAAAGTGTTTTTTGATACTGATGATGATGATGATGTACCACACAGTACTTCCAGGTGGCGGGATGCTGCCGATGCTGAGGAGGCTCATGCCGAGGGCCTAGCCA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) |
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