| Gene: Slc6a8 | ID: uc009tmf.1_intron_3_0_chrX_70922793_f.3p | SPECIES: mm9 |
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(8) OTHER.mut |
(12) TESTES |
| GGTAGTCCCTCACTCAGGAATAGAATCAGTGCTACTGGCTTTCCTAATCAAATTCTGAGCATGACTGCAATTTGGGGATATGACTGTTGCCCACGTTATGAGCTCACAGTAGCGCTGGGAACCAGCCACCAAGCTTAGGCAGGAGGCATCTTAAGGGGGATCAGGGATCCAGAGCCTCTCTGAGCACCCTGGCCCCCCAGATCGTGTACTTCACTGCTACATTCCCCTACGTGGTCCTCGTTGTGCTGCT ..........................................................................................................(((.....))).......(((.((..((....)).)).))).......(((((..(((((...(((((...)))))....)))))..))))).................................................... .........................................................................................................106...........................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................AGGGGGATCAGGGATCCAGAGC........................................................................... | 22 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................CTGAGCACCCTGGCCCCCCAGA................................................. | 22 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................CTGAGCACCCTGGCCCCCC.................................................... | 19 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................CTGAGCACCCTGGCCCCCCAG.................................................. | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................AGGGGGATCAGGGATCCAGAGCCT......................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................................TAAGGGGGATCAGGtggg................................................................................. | 18 | tggg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......................................................................................................................................................TAAGGGGGATCAGGGATCCAGA............................................................................. | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................AGCGCTGGGAACCAagaa.......................................................................................................................... | 18 | agaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................................................................................................AAGGGGGATCAGGGATCCAGA............................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TGAGCACCCTGGCCCCCCAG.................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........TCACTCAGGAATAGAATCAGTGCTACTGGC................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................................................................................................TCTCTGAGCACCCTGGC......................................................... | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| GGTAGTCCCTCACTCAGGAATAGAATCAGTGCTACTGGCTTTCCTAATCAAATTCTGAGCATGACTGCAATTTGGGGATATGACTGTTGCCCACGTTATGAGCTCACAGTAGCGCTGGGAACCAGCCACCAAGCTTAGGCAGGAGGCATCTTAAGGGGGATCAGGGATCCAGAGCCTCTCTGAGCACCCTGGCCCCCCAGATCGTGTACTTCACTGCTACATTCCCCTACGTGGTCCTCGTTGTGCTGCT ..........................................................................................................(((.....))).......(((.((..((....)).)).))).......(((((..(((((...(((((...)))))....)))))..))))).................................................... .........................................................................................................106...........................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................AAGGGGGATCAGGGAgtga................................................................................... | 19 | gtga | 3.00 | 0.00 | - | - | - | - | 2.00 | 1.00 | - | - | - | - | - | - |