| Gene: Arhgef6 | ID: uc009thd.1_intron_5_0_chrX_54495004_r.3p | SPECIES: mm9 |
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(5) OTHER.mut |
(2) PIWI.ip |
(23) TESTES |
| AAGAACTGGATTCTTTGGACTTTTGCATGAGGGTATTGCATCTGAGACTAATGTGGGAAATGTGGCGGTATTCTTTCTGTGTAATTGATGATAACACTAACATTTCAAATGTTGTTTTAGAACTATTGATAAATGGATGTGGTCATTATAACCATCAACCTCTCACGCTCATCTTTTCTTTCTTTACATATTCATTTTAGAGGATGTCTTATATCTTAAAGGTAAGGGTAGAACAGTGACATCGTAATGT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR037900(GSM510436) testes_rep1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) |
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| ....................................................GTGGGAAATGTGGCGtacg................................................................................................................................................................................... | 19 | tacg | 388.67 | 102.00 | 113.33 | 63.67 | 45.67 | 7.33 | 43.33 | 38.00 | 24.67 | 42.00 | - | 4.67 | 0.67 | 1.00 | 1.33 | 0.67 | 0.33 | 0.33 | 0.33 | - | - | 0.33 | 0.67 | 0.33 | - |
| ....................................................GTGGGAAATGTGGCGtac.................................................................................................................................................................................... | 18 | tac | 341.67 | 102.00 | 90.33 | 46.00 | 33.00 | 46.33 | 13.00 | 26.33 | 24.00 | 15.00 | 3.67 | 9.00 | 15.00 | 4.33 | 2.67 | 5.00 | 3.67 | 0.67 | 2.00 | 1.00 | - | 0.33 | - | - | 0.33 |
| ....................................................GTGGGAAATGTGGCGta..................................................................................................................................................................................... | 17 | ta | 302.00 | 102.00 | 94.33 | 40.67 | 23.00 | 11.33 | 22.33 | 23.67 | 19.33 | 19.67 | 26.67 | 3.67 | - | 4.67 | 2.67 | 1.67 | 2.33 | 5.33 | - | - | 0.67 | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGt...................................................................................................................................................................................... | 16 | t | 157.67 | 102.00 | 55.67 | 15.33 | 16.33 | 4.33 | 21.00 | 12.00 | 18.67 | 6.67 | - | 4.33 | - | 1.67 | 0.67 | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCG....................................................................................................................................................................................... | 15 | 3 | 102.00 | 102.00 | 30.67 | 17.33 | 14.00 | 5.00 | 11.67 | 2.67 | 13.33 | 2.33 | - | 2.33 | - | 0.67 | 1.67 | - | 0.33 | - | - | - | - | - | - | - | - |
| .....................................................TGGGAAATGTGGCGtac.................................................................................................................................................................................... | 17 | tac | 23.00 | 0.00 | - | - | - | 17.00 | - | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................TGGGAAATGTGGCGta..................................................................................................................................................................................... | 16 | ta | 15.00 | 0.00 | - | - | - | 13.00 | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................TGGGAAATGTGGCGtacg................................................................................................................................................................................... | 18 | tacg | 14.00 | 0.00 | - | - | - | 5.00 | - | - | - | - | 4.00 | - | - | - | 2.00 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - |
| ...................................................TGTGGGAAATGTGGCGtac.................................................................................................................................................................................... | 19 | tac | 6.00 | 0.00 | 1.00 | 3.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................GGGAAATGTGGCGtacg................................................................................................................................................................................... | 17 | tacg | 6.00 | 0.00 | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................TGTGGGAAATGTGGCGtacg................................................................................................................................................................................... | 20 | tacg | 3.00 | 0.00 | 1.00 | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TGTGGGAAATGTGGCGt...................................................................................................................................................................................... | 17 | t | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TGTGGGAAATGTGGCGta..................................................................................................................................................................................... | 18 | ta | 2.00 | 0.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGtat.................................................................................................................................................................................... | 18 | tat | 1.33 | 102.00 | - | 0.33 | 0.67 | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGGca.................................................................................................................................................................................... | 18 | ca | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGGacgg.................................................................................................................................................................................. | 20 | acgg | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................GTAAGGGTAGAACAGTGACATCGTA.... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGGac.................................................................................................................................................................................... | 18 | ac | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................TGGGAAATGTGGCGGac.................................................................................................................................................................................... | 17 | ac | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCttac.................................................................................................................................................................................... | 18 | ttac | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCtta..................................................................................................................................................................................... | 17 | tta | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGtcc.................................................................................................................................................................................... | 18 | tcc | 0.33 | 102.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGtgcg................................................................................................................................................................................... | 19 | tgcg | 0.33 | 102.00 | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGtaga................................................................................................................................................................................... | 19 | taga | 0.33 | 102.00 | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGtaca................................................................................................................................................................................... | 19 | taca | 0.33 | 102.00 | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGa...................................................................................................................................................................................... | 16 | a | 0.33 | 102.00 | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGcgga................................................................................................................................................................................... | 19 | cgga | 0.33 | 102.00 | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGaacg................................................................................................................................................................................... | 19 | aacg | 0.33 | 102.00 | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGcggc................................................................................................................................................................................... | 19 | cggc | 0.33 | 102.00 | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGtacc................................................................................................................................................................................... | 19 | tacc | 0.33 | 102.00 | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGtact................................................................................................................................................................................... | 19 | tact | 0.33 | 102.00 | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGcac.................................................................................................................................................................................... | 18 | cac | 0.33 | 102.00 | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................GTGGGAAATGTGGCGtagc................................................................................................................................................................................... | 19 | tagc | 0.33 | 102.00 | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AAGAACTGGATTCTTTGGACTTTTGCATGAGGGTATTGCATCTGAGACTAATGTGGGAAATGTGGCGGTATTCTTTCTGTGTAATTGATGATAACACTAACATTTCAAATGTTGTTTTAGAACTATTGATAAATGGATGTGGTCATTATAACCATCAACCTCTCACGCTCATCTTTTCTTTCTTTACATATTCATTTTAGAGGATGTCTTATATCTTAAAGGTAAGGGTAGAACAGTGACATCGTAATGT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR037900(GSM510436) testes_rep1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) |
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