| Gene: AK021262 | ID: uc009tes.1_intron_1_0_chrX_50409342_r | SPECIES: mm9 |
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(6) OTHER.mut |
(2) PIWI.ip |
(2) PIWI.mut |
(18) TESTES |
| AAATTTAAGAAGTTCTACGATTTCGGCGCCATTTTCGAGTGGAGTGAGAGGTGACTTAGAATCTAAAAAAGAAAAAAACGAGGGGGAAGGGAACTTTTTGGCCCGCCTCCCCCCGCCCCCAACTATGTCTCTGGTCACTACAGACTGTAACAGATACGGGGATAATTCTCAAAAAAATGTTATGCGTCGCGCTGGGTGGGGTGTGGGGGTGGAAAGCGTGTCCGGGGGTCGTGGTGGGGGGAGGACAGATCTTTAAAATGTCTAGCAAGTGAGTGTGGCCAGGGAACTTCTCAGAAAGTGGACTGAGAAGAGTAAACGGGGAGGGGTGGGGAGAGAGAAATGAGTGAGGGGCGGGCAGCCTCAGGCTGTCAGCCTTGCCAGGGTGGGGAGCAACTAGTTTTGACAGACTGTAAATGGGACTTTGGGCCACTCATTTGTAAGCAGTAAAGAATGTCCTGGAAAGAACCGTAAAATTCGTTTTCCATTGTCTCTCGCTAATTAAAACTTTTCAAGGTTGTTTAGTTGTTTTTTTTTTTTTTCCAGTATTGGAAAAGTTTGGCTGGAAGGTGCGGAGGACCTGTGCATCATGTTTT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................................................................................................................................................................................................................................................................TGACAGACTGTAAATGGGACTTTGGGC...................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................GACAGACTGTAAATGGGACTTTGGGCCACTC................................................................................................................................................................. | 31 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................AGTGTGGCCAGGGAACT................................................................................................................................................................................................................................................................................................................. | 17 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................GAACTTCTCAGAAAGTGGACTGAGA............................................................................................................................................................................................................................................................................................. | 25 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................GCGCCATTTTCGAGTGGAGTGAGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAAGCAGTAAAGAATGTCCTGGAAAGA................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................................................................................................................................................................................................GGAACTTCTCAGAAAGTGGACTGAG.............................................................................................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................AGCAAGTGAGTGTGGCCAGGGAACTT................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................................ACAGACTGTAACAGATACGGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAAGGTGCGGAGGACCTGT............ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................................................................................................................................................................................................................................AGTGTGGCCAGGGAACTTCTCAGAAAGTGGACT................................................................................................................................................................................................................................................................................................. | 33 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTATTGGAAAAGTTTGGCTGGAA............................ | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................GAGTGGAGTGAGAGGTGACTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................TGGGTGGGGTGTGGGGGTGGAA........................................................................................................................................................................................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................ACTACAGACTGTAACAGATACGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................................AGGCTGTCAGCCTTGCCAGGGTGGGGAGC.......................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGACTTAGAATCTAAAAAAGAAAAAAACGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................AACGGGGAGGGGTGcaaa..................................................................................................................................................................................................................................................................... | 18 | caaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..............................................................................................................................................................................................................................................................................GAGTGTGGCCAGGGAACT................................................................................................................................................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................CTATGTCTCTGGTCACTACAGACTGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................TTTTGACAGACTGTAAATGGGACTTTGGGCCACT.................................................................................................................................................................. | 34 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................CAGAAAGTGGACTGAGAAGAGTAA...................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................AAAGCGTGTCCGGGGGTCGc......................................................................................................................................................................................................................................................................................................................................................................... | 20 | c | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................GTGGCCAGGGAACTTCTCAGAAAGTGG.................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................AGGTGACTTAGAATCTAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAGAATGTCCTGGAAA................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................TGGGTGGGGTGTGGGGGTGGga........................................................................................................................................................................................................................................................................................................................................................................................... | 22 | ga | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTTTGGCTGGAAGGTGCGGAGGACCTGT............ | 32 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................TCTCAGAAAGTGGACTGAGA............................................................................................................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................CGAGTGGAGTGAGAGGTGACTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................TCAAAAAAATGTTATGCGTCGCGCTGGGTGG.......................................................................................................................................................................................................................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................GAAAGTGGACTGAGAAGAGT........................................................................................................................................................................................................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGAATGTCCTGGAAAG.................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................TTTGACAGACTGTAAATGGG............................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................ATTTTCGAGTGGAGTGAGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................GTGGACTGAGAAGAGTAAAC.................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATGTCCTGGAAAGAAC............................................................................................................................... | 20 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................GGCGCCATTTTCGAGTGGAGTGAGAGGTGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................GTGGAAAGCGTGTCCGGGGGTCGT......................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................AAAGCGTGTCCGGGGGTCGT......................................................................................................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................GAAAGTGGACTGAGAAG........................................................................................................................................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TACAGACTGTAACAGATACGGGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................GGAGGACAGATCTTTAAAATGTCTAGCAAGTG.................................................................................................................................................................................................................................................................................................................................. | 32 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................AGACTGTAACAGATACGGGGATAATTCTCAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................ATTTTCGAGTGGAGTGAGAGGTGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................CTTCTCAGAAAGTGGAatt................................................................................................................................................................................................................................................................................................ | 19 | att | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................AAAGTGGACTGAGAAGAGTAA...................................................................................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................TTTGACAGACTGTAAAT.................................................................................................................................................................................. | 17 | 3 | 0.33 | 0.33 | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................TGGACTGAGAAGAGTA....................................................................................................................................................................................................................................................................................... | 16 | 6 | 0.17 | 0.17 | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................GTGGACTGAGAAGAGT........................................................................................................................................................................................................................................................................................ | 16 | 7 | 0.14 | 0.14 | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................GGGGTGTGGGGGTGGAA........................................................................................................................................................................................................................................................................................................................................................................................... | 17 | 11 | 0.09 | 0.09 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.09 |
| ..........................................................................................................................................................................................................................................................................................................TGGACTGAGAAGAGT........................................................................................................................................................................................................................................................................................ | 15 | 12 | 0.08 | 0.08 | - | - | - | - | 0.08 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AAATTTAAGAAGTTCTACGATTTCGGCGCCATTTTCGAGTGGAGTGAGAGGTGACTTAGAATCTAAAAAAGAAAAAAACGAGGGGGAAGGGAACTTTTTGGCCCGCCTCCCCCCGCCCCCAACTATGTCTCTGGTCACTACAGACTGTAACAGATACGGGGATAATTCTCAAAAAAATGTTATGCGTCGCGCTGGGTGGGGTGTGGGGGTGGAAAGCGTGTCCGGGGGTCGTGGTGGGGGGAGGACAGATCTTTAAAATGTCTAGCAAGTGAGTGTGGCCAGGGAACTTCTCAGAAAGTGGACTGAGAAGAGTAAACGGGGAGGGGTGGGGAGAGAGAAATGAGTGAGGGGCGGGCAGCCTCAGGCTGTCAGCCTTGCCAGGGTGGGGAGCAACTAGTTTTGACAGACTGTAAATGGGACTTTGGGCCACTCATTTGTAAGCAGTAAAGAATGTCCTGGAAAGAACCGTAAAATTCGTTTTCCATTGTCTCTCGCTAATTAAAACTTTTCAAGGTTGTTTAGTTGTTTTTTTTTTTTTTCCAGTATTGGAAAAGTTTGGCTGGAAGGTGCGGAGGACCTGTGCATCATGTTTT |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
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