| Gene: Thoc2 | ID: uc009tao.1_intron_37_0_chrX_39251028_r.5p | SPECIES: mm9 |
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(4) OTHER.mut |
(1) PIWI.mut |
(18) TESTES |
| GTTCCCGCAGAGTGGATAAAGAACTGGGAGAAATCAGGGAGAGGCGAATTGTGAGTGTTTCTGACCGAGGGAAGGCGCCGGGCCGCCCTGAGGTCGGGGCGCTGGGCGCAGTCGGAAGTGGGGTACAGGGGCCGGGGGGCAGCGGCGCCCCCTCCCCCACCCGCACCCGGGCGGCGGATGAGGATGGTTGGTTGGTCCGGAGTTTCCACTTGGCTGAGGAGCGGAGCCGGGAGCCGCCACTATCGCCGCC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................TGAGTGTTTCTGACCGAGGGAAGGCGC............................................................................................................................................................................ | 27 | 1 | 15.00 | 15.00 | 7.00 | 2.00 | 3.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................TGTGAGTGTTTCTGACCGAGGGAAGGC.............................................................................................................................................................................. | 27 | 1 | 8.00 | 8.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TTCTGACCGAGGGAAGGCGCCGGG........................................................................................................................................................................ | 24 | 1 | 4.00 | 4.00 | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................AGAACTGGGAGAAATCAGGGAGAGGC............................................................................................................................................................................................................. | 26 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........AGAGTGGATAAAGAACTGGG.............................................................................................................................................................................................................................. | 20 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........GTGGATAAAGAACTGGGAGAAATCAGGGAGAGGC............................................................................................................................................................................................................. | 34 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TGGATAAAGAACTGGGAGA........................................................................................................................................................................................................................... | 19 | 2 | 2.50 | 2.50 | 2.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................GAACTGGGAGAAATCAGGGAGAGGCGAA.......................................................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TCCACTTGGCTGAGGAGCGGAGCCG..................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...................AGAACTGGGAGAAATCAGGGAGAGG.............................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................TCAGGGAGAGGCGAATTGTGAG................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................CTGACCGAGGGAAGGCGCC........................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TGAGTGTTTCTGACCGAGGGAAGGCGt............................................................................................................................................................................ | 27 | t | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................CTTGGCTGAGGAGCGcggg....................... | 19 | cggg | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................AAAGAACTGGGAGAAATCAGGGAGAGt.............................................................................................................................................................................................................. | 27 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................GAACTGGGAGAAATCAGGGAGAGGCG............................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................AAAGAACTGGGAGAAATCAGGGAGA................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................TTGTGAGTGTTTCTGACCGAGGGAA................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TCCACTTGGCTGAGGAGCGG.......................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................GTGTTTCTGACCGAGGGA.................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................AAGAACTGGGAGAAATCAGGGAGAGG.............................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................TGTTTCTGACCGAGGGAAGG............................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........AGAGTGGATAAAGAACTGGGAG............................................................................................................................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...CCCGCAGAGTGGATAAAGAACTGGG.............................................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................CTGGGAGAAATCAGGGAGA................................................................................................................................................................................................................ | 19 | 2 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TGAGTGTTTCTGACCGAGGGAAGGCG............................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................AACTGGGAGAAATCAGGGAGAGGCG............................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ........AGAGTGGATAAAGAACTGGGAGAAATCAGGGAGAG............................................................................................................................................................................................................... | 35 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................AAAGAACTGGGAGAAATCAGGGAGAGGC............................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................AAAGAACTGGGAGAAATCAGGGAGAGG.............................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................ACTGGGAGAAATCAGGGA.................................................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TGGATAAAGAACTGGGAG............................................................................................................................................................................................................................ | 18 | 2 | 1.00 | 1.00 | - | - | - | - | - | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| ................................ATCAGGGAGAGGCGAATTGTGAG................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................TGTGAGTGTTTCTGACCGAGGGAAGG............................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........GAGTGGATAAAGAACTGG............................................................................................................................................................................................................................... | 18 | 2 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TGAGGATGGTTGGTTGGTCCGGAGT............................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........GAGTGGATAAAGAACTGGGAGAAATCA...................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................GGCGCAGTCGGAAGTctgc............................................................................................................................... | 19 | ctgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................TGTTTCTGACCGAGGGAAGGCGCCG.......................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........GTGGATAAAGAACTGGGAGAA.......................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........GAGTGGATAAAGAACTGGGA............................................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......CAGAGTGGATAAAGAACTGGGAGAAATCAGGG................................................................................................................................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................TTGTGAGTGTTTCTGACCGAGGGA.................................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TTCTGACCGAGGGAAGG............................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........GTGGATAAAGAACTGGGA............................................................................................................................................................................................................................. | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| ...................AGAACTGGGAGAAATCAG..................................................................................................................................................................................................................... | 18 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........GTGGATAAAGAACTGGG.............................................................................................................................................................................................................................. | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - |
| GTTCCCGCAGAGTGGATAAAGAACTGGGAGAAATCAGGGAGAGGCGAATTGTGAGTGTTTCTGACCGAGGGAAGGCGCCGGGCCGCCCTGAGGTCGGGGCGCTGGGCGCAGTCGGAAGTGGGGTACAGGGGCCGGGGGGCAGCGGCGCCCCCTCCCCCACCCGCACCCGGGCGGCGGATGAGGATGGTTGGTTGGTCCGGAGTTTCCACTTGGCTGAGGAGCGGAGCCGGGAGCCGCCACTATCGCCGCC |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................................................CCGGAGTTTCCtgga........................................... | 15 | tgga | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |