| Gene: Uxt | ID: uc009sue.1_intron_5_0_chrX_20538913_r | SPECIES: mm9 |
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(4) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(21) TESTES |
| CTAACAGTTATTGCCGGTGGCCCTACGGTAAACGCCGTACTCCTGTACCGGTGAGTGAACGAGTTCCAAAATCGGGTTGGGCAGAAGCAACTCCGTAGCTCGAGCCGAAAGAAGTCATCCCCAACGTTGAGTGGCTGGAGAGAATTTTGTGAAGTTTAAATAGAGCGCTCAACGTGCCCCCCCCTTTACTCCCCCAGGTGCCCGTCATGGCGACGCCCCCGAAACGGCGGGCCTTGGATACGGTGGG ..................................................................................................(((.(((((...((.((........)).))...))))).)))........................................................................................................... ......................................................................................87...........................................................148................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | GSM475281(GSM475281) total RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................TCCGTAGCTCGAGCCGAAAGAAGTCAT................................................................................................................................. | 27 | 1 | 5.00 | 5.00 | - | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ............................TAAACGCCGTACTCCTGTACCGGTGc................................................................................................................................................................................................. | 26 | c | 5.00 | 0.00 | 1.00 | - | - | - | - | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...........................................................................................TCCGTAGCTCGAGCCGAAAGAAGTCA.................................................................................................................................. | 26 | 1 | 4.00 | 4.00 | 1.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................CGAAACGGCGGGCCTTGGATACGGTG.. | 26 | 1 | 4.00 | 4.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................................................ATCGGGTTGGGCAGAAGC............................................................................................................................................................... | 18 | 1 | 3.00 | 3.00 | - | - | - | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TACGGTAAACGCCGTACTCCTGTACCGt.................................................................................................................................................................................................... | 28 | t | 2.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................................................................................................................................................................................................CGAAACGGCGGGCCTTGGATACGGTGt. | 27 | t | 2.00 | 4.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................GAAGCAACTCCGTAGCTCGAGCCGAA.......................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................TCCGTAGCTCGAGCCGAAAGAAGTCATC................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................TAAACGCCGTACTCCTGTACCGGTGccc............................................................................................................................................................................................... | 28 | ccc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................GAAGCAACTCCGTAGCTCGAGCCGAAA......................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TCCAAAATCGGGTTGGGC..................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................GTTGAGTGGCTGGAGAGAA....................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................CGAAACGGCGGGCCTTGGATACGG.... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........ATTGCCGGTGGCCCTACGGTAAACGCCG.................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................TACCGGTGAGTGAACagg........................................................................................................................................................................................ | 18 | agg | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................CGAAACGGCGGGCCTTGGATACGGTGGG | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TACGGTAAACGCCGTACTCCTGTACCGGT................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TCGAGCCGAAAGAAGTCATCCCCAACGT........................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TACGGTAAACGCCGTACTCCTGTACCGtt................................................................................................................................................................................................... | 29 | tt | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................TAGCTCGAGCCGAAAGAAGTCATCCCC............................................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................GTAGCTCGAGCCGAAAGAAG..................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................CGAAACGGCGGGCCTTGGATACcct... | 25 | cct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................GTGAGTGAACGAGTTCCAAAATCGGGT.......................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .TAACAGTTATTGCCGGTGGCCCTACG............................................................................................................................................................................................................................ | 26 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TGAGTGGCTGGAGAGAATTTTGTGAA.............................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TACCGGTGAGTGAACGAGTTCCAAAA................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................AAATCGGGTTGGGgtc................................................................................................................................................................... | 16 | gtc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................TGGCCCTACGGTAAACGC.................................................................................................................................................................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ........TATTGCCGGTGGCCCTACGGTAAACGC.................................................................................................................................................................................................................... | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....AGTTATTGCCGGTGGCCCTACGGTA......................................................................................................................................................................................................................... | 25 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................GGCTGGAGAGAATTTT................................................................................................... | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CTAACAGTTATTGCCGGTGGCCCTACGGTAAACGCCGTACTCCTGTACCGGTGAGTGAACGAGTTCCAAAATCGGGTTGGGCAGAAGCAACTCCGTAGCTCGAGCCGAAAGAAGTCATCCCCAACGTTGAGTGGCTGGAGAGAATTTTGTGAAGTTTAAATAGAGCGCTCAACGTGCCCCCCCCTTTACTCCCCCAGGTGCCCGTCATGGCGACGCCCCCGAAACGGCGGGCCTTGGATACGGTGGG ..................................................................................................(((.(((((...((.((........)).))...))))).)))........................................................................................................... ......................................................................................87...........................................................148................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | GSM475281(GSM475281) total RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................AACTCCGTAGCTCGAGCCGAAAGAA...................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................CTCCGTAGCTCGAGCCGAAAGAAGTCA.................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................GCCGTACTCCTGTACCGGTGAGTGAACGAGTTCCAA.................................................................................................................................................................................. | 36 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................GTACCGGTGAGTGAACGAGTTCCAAAA................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................CCGGTGAGTGAACGAGTTCCAAAATCG............................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........TTGCCGGTGGCCCTACGGTAAACGCCG.................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................CCGAAAGAAGTCATCCCCAACGTTGA..................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................GAACGAGTTCCAAAATCGGGTTGGGCA.................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......GTTATTGCCGGTGGCCCTACGGTAAACG..................................................................................................................................................................................................................... | 28 | 2 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .CAGTTATTGCCGGTGGCCCTACGGTAcca......................................................................................................................................................................................................................... | 29 | cca | 0.50 | 0.00 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....CAGTTATTGCCGGTGGCCCTACGGTA......................................................................................................................................................................................................................... | 26 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....AGTTATTGCCGGTGGCCCTACGGTAAAC...................................................................................................................................................................................................................... | 28 | 2 | 0.50 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |