| Gene: 1810030O07Rik | ID: uc009sqy.1_intron_0_0_chrX_12233613_r.3p | SPECIES: mm9 |
|
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(3) OTHER.mut |
(7) PIWI.ip |
(1) PIWI.mut |
(20) TESTES |
| GTGGTTCTGGAAATGCTAGGAAAGTGCTTGGAAACTTCATTCTTAGCAGTAGTCAAACAAAACTTTCTCTTTCACCGTGCTCATAAATTCATTCCCAGCTCTGCTCTTCTTGAACTGTGTGGAAGCCTTGTACTATTGTGTGCAGTGTTCTGTGGGAGTCAGACTCACTTCCATTTCTTCCTCGGTCTGCTCATTCCCAGGGTCTTTGCCATTAGACTGCTTCATGTCACCTCTGGACGTTACTATGTTC ......................................................................................................((((((...((((.((......)).((((((......)))))).))))...))))))........................................................................................... .....................................................................................................102.........................................................162...................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesWT3() Testes Data. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................TTCTTGAACTGTGTGGAAGCCTTGTA...................................................................................................................... | 26 | 1 | 38.00 | 38.00 | 22.00 | 8.00 | 6.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................TGAACTGTGTGGAAGCCTTGTACTATT................................................................................................................. | 27 | 1 | 29.00 | 29.00 | 7.00 | 12.00 | 6.00 | 2.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TGAACTGTGTGGAAGCCTTGTACTATTG................................................................................................................ | 28 | 1 | 14.00 | 14.00 | 5.00 | 5.00 | - | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......TGGAAATGCTAGGAAAGTGCTTGGAAAC....................................................................................................................................................................................................................... | 28 | 1 | 9.00 | 9.00 | 1.00 | - | - | 1.00 | - | - | 2.00 | - | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| ...........................................................................................................TCTTGAACTGTGTGGAAGCCTTGTAC..................................................................................................................... | 26 | 1 | 7.00 | 7.00 | 3.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TGAACTGTGTGGAAGCCTTGTACTAT.................................................................................................................. | 26 | 1 | 7.00 | 7.00 | 2.00 | 4.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TGCCATTAGACTGCTTCATGTCACCTCT................ | 28 | 1 | 6.00 | 6.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......TGGAAATGCTAGGAAAGTGCTTGGAA......................................................................................................................................................................................................................... | 26 | 1 | 5.00 | 5.00 | - | 4.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TTCTTGAACTGTGTGGAAGCCTTGTAC..................................................................................................................... | 27 | 1 | 5.00 | 5.00 | 2.00 | - | - | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TGAACTGTGTGGAAGCCTTGTACTATTGT............................................................................................................... | 29 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TGCCATTAGACTGCTTCATGTCACCTC................. | 27 | 1 | 4.00 | 4.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .......................................TTCTTAGCAGTAGTCAAACAAAACTTTC....................................................................................................................................................................................... | 28 | 1 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................TGTCACCTCTGGACGTTACTATGTTC | 26 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................TCTGCTCTTCTTGAACTGTGTGGAAGC............................................................................................................................ | 27 | 1 | 3.00 | 3.00 | - | 1.00 | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TAGACTGCTTCATGTCACCTCTGGACGT.......... | 28 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................TCTTGAACTGTGTGGAAGCCTTGTACT.................................................................................................................... | 27 | 1 | 3.00 | 3.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .TGGTTCTGGAAATGCTAGGAAAGTGC............................................................................................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TGAACTGTGTGGAAGCCTTGTACTATTGTG.............................................................................................................. | 30 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................TCTTGAACTGTGTGGAAGCCTTGTA...................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................TCTTCTTGAACTGTGTGGAAGCCTTGTA...................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TGCTCATTCCCAGGGTCTTTGCCATT..................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TTCTTGAACTGTGTGGAAGCCTTGTACT.................................................................................................................... | 28 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................TTCTTGAACTGTGTGGAAGCCTTGTAt..................................................................................................................... | 27 | t | 2.00 | 38.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TAGGAAAGTGCTTGGAAACTTCATTC................................................................................................................................................................................................................ | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........GAAATGCTAGGAAAGTGCTT............................................................................................................................................................................................................................. | 20 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| .......TGGAAATGCTAGGAAAGTGCTTGGA.......................................................................................................................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TAGGAAAGTGCTTGGAAACTTCATTCT............................................................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCTCTTCTTGAACTGTGTGGAAGCCT.......................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................TTCCCAGGGTCTTTGCCATTAGACTGCTTC........................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................TTGAACTGTGTGGAAGCCTTGTACTATTG................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TCTTTGCCATTAGACTGCTTCATGTC...................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................TTTGCCATTAGACTGCTTCATGTCA..................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................TACTATTGTGTGCAGTGTTCTGTGGG.............................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................ATTAGACTGCTTCATGTCACCTCTGGAC............ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................TTGTGTGCAGTGTTCTGTGGGAGT........................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TTGCCATTAGACTGCTTCATGTCACCTCT................ | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................TTGTGTGCAGTGTTCTGTGGG.............................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................TATTGTGTGCAGTGTTCTGTGGGAG............................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................TTGAACTGTGTGGAAGCCTTGTACTA................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TTAGACTGCTTCATGTCACCTCTGGACGT.......... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................................................................................................................GTACTATTGTGTGCAGTGTTCTttg................................................................................................ | 25 | ttg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................................................................................................................................................................................ATTAGACTGCTTCATGTCACCTCTGGA............. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...........................................................................................................TCTTGAACTGTGTGGAAGCCTTttac..................................................................................................................... | 26 | ttac | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................CATTAGACTGCTTCATGTCACCTCTG............... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................CTCTTCTTGAACTGTGTGGAAtcct.......................................................................................................................... | 25 | tcct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................CTATTGTGTGCAGTGTTCTGTGGGAG............................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TTCCCAGCTCTGCTCTTCTTGAACTGTGT.................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TAAATTCATTCCCAGCTCTGCTCTTCT............................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCTCTTCTTGAACTGTGTGGAAGCC........................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................TGTGGAAGCCTTGTACTATTGTGTGC........................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................TTGTGTGCAGTGTTCTGTGGGAGTCAGACT..................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................TATTGTGTGCAGTGTTCTGTGGGAGT........................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TCCATTTCTTCCTCGGTCTGCTCATT....................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TGAACTGTGTGGAAGCCTTGTACTtgt................................................................................................................. | 27 | tgt | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................TTGGAAACTTCATTCTTAGCAGTAGTC.................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................CTTGAACTGTGTGGAAGCCTTGTACTATT................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................TCTTCTTGAACTGTGTGGAAGCCTTGT....................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................TTGCCATTAGACTGCTTCATGTCACCT.................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................CTTAGCAGTAGTCAAACAAAACTTTCTCTT................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TGAACTGTGTGGAAGCCTTGTAC..................................................................................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................TGTGTGCAGTGTTCTGTGGGAGTC.......................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TTAGACTGCTTCATGTCACCTCTGGAC............ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................AACTGTGTGGAAGCCTTGTACTATTGT............................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..GGTTCTGGAAATGCTAGGAAAGTGCTT............................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................TATTGTGTGCAGTGTTCTGTGGGtgt........................................................................................... | 26 | tgt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................CCAGCTCTGCTCTTCTTGAACTGTGTG................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................TGTCACCTCTGGACGTTACTATGTTCccca | 30 | ccca | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| GTGGTTCTGGAAATGCTAGGAAAGTGCTTGGAAACTTCATTCTTAGCAGTAGTCAAACAAAACTTTCTCTTTCACCGTGCTCATAAATTCATTCCCAGCTCTGCTCTTCTTGAACTGTGTGGAAGCCTTGTACTATTGTGTGCAGTGTTCTGTGGGAGTCAGACTCACTTCCATTTCTTCCTCGGTCTGCTCATTCCCAGGGTCTTTGCCATTAGACTGCTTCATGTCACCTCTGGACGTTACTATGTTC ......................................................................................................((((((...((((.((......)).((((((......)))))).))))...))))))........................................................................................... .....................................................................................................102.........................................................162...................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesWT3() Testes Data. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................................TCATTCCCAGGGTCTTTGCCA....................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................CTGCTCATTCCCAGGGTCTTTGCCATTAGA.................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |