| Gene: C85492 | ID: uc009sem.1_intron_1_0_chr9_121904069_r | SPECIES: mm9 |
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(2) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(1) PIWI.mut |
(15) TESTES |
| CAGAGTGAAAAAAGACCTTCTTTGAAGAATTGCTGTGAGGCTTCCATGAGGTAATGCTGGCAAAGCTTTCTGTCTGGGTTCTGAACACATCAAATGTTAGCATGCACGACCACCAACTCTATAGACAAGGTTGGAGTTCTGGTTCCGGGTCCTGTCTTTTCCACAGACTAGCTGCTCTCAGGCTTTTAGGATCAGCCGGCCCTTTCACATGAAGGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................TAGACAAGGTTGGAGTTCTGGTTCC...................................................................... | 25 | 1 | 11.00 | 11.00 | 4.00 | - | 1.00 | 4.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ...............................................................................TCTGAACACATCAAATGTTAGCATGCACGAC.......................................................................................................... | 31 | 1 | 7.00 | 7.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................TCTGAACACATCAAATGTTAGCATGCAC............................................................................................................. | 28 | 1 | 6.00 | 6.00 | - | - | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................TAGACAAGGTTGGAGTTCTGGTTCCGGG................................................................... | 28 | 1 | 3.00 | 3.00 | - | - | 1.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ......................TGAAGAATTGCTGTGAGGCTTCCAT......................................................................................................................................................................... | 25 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TGGAGTTCTGGTTCCGGGTCCTGT............................................................. | 24 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................TAGACAAGGTTGGAGTTCTGGTTCCG..................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................CCACCAACTCTATAGAC.......................................................................................... | 17 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................TATAGACAAGGTTGGAGTTCTGGTT........................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................GACAAGGTTGGAGTTCTGGTTCCGGt................................................................... | 26 | t | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................GGGTTCTGAACACATCAAATGTTAGCAT................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................AAGCTTTCTGTCTGGGTTCTGAACAC................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .................................................................................................TAGCATGCACGACCACCAACTCTATAGAC.......................................................................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TGGAGTTCTGGTTCCGGGTCCTGTC............................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TCTGGTTCCGGGTCCTGTCTTTTCC...................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................TAGGATCAGCCGGCCCTTTCACATGAAG.. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................TAGGATCAGCCGGCCCTTTCACATG..... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ............................................................................................................................................................................TGCTCTCAGGCTTTTAGGATCAGCtggc................ | 28 | tggc | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ......................................................................TGTCTGGGTTCTGAACACATCAAATGT....................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................TCTTTTCCACAGACTAGCTGCTCTCA.................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................TCTATAGACAAGGTTGGAGTTCTGGTT........................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................TGCACGACCACCAACTCTATAGACAAGGT..................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...............................................................................................................................................................................TCTCAGGCTTTTAGGATC....................... | 18 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................TGAACACATCAAATGTTAGCATGCAC............................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................TAGACAAGGTTGGAGTTCTGGTTC....................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................................................................................TAGCATGCACGACCACCAACTCTATAGA........................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................TGAACACATCAAATGTTAGCATGCACGA........................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................TGCTCTCAGGCTTTTAGGATCAGC.................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................TGAACACATCAAATGTTAGCATGCACGAC.......................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................TTCTGAACACATCAAATGTTAGCATGC............................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................TTCTGTCTGGGTTCTG..................................................................................................................................... | 16 | 14 | 0.07 | 0.07 | - | - | - | - | - | - | - | - | 0.07 | - | - | - | - | - | - | - |
| CAGAGTGAAAAAAGACCTTCTTTGAAGAATTGCTGTGAGGCTTCCATGAGGTAATGCTGGCAAAGCTTTCTGTCTGGGTTCTGAACACATCAAATGTTAGCATGCACGACCACCAACTCTATAGACAAGGTTGGAGTTCTGGTTCCGGGTCCTGTCTTTTCCACAGACTAGCTGCTCTCAGGCTTTTAGGATCAGCCGGCCCTTTCACATGAAGGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014234(GSM319958) Ovary total. (ovary) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................AGTTCTGGTTCCGGGgcgg................................................................... | 19 | gcgg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .......................................................TGGCAAAGCTTTCTGTCTtt............................................................................................................................................. | 20 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |