| Gene: Ctnnb1 | ID: uc009sct.1_intron_6_0_chr9_120862122_f.3p | SPECIES: mm9 |
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(4) OTHER.mut |
(1) PIWI.mut |
(18) TESTES |
| AAGGAGTTGGTAGGAATGTTACAGATGGTGAAACTGTCCATAAACAATAGAAGGGTATAGCAGCCATTTGACATGAGTTATCACTGGCAAGGTAGATTAGAAAAGCTGTGTGACATTCTAAAAAACTGAAGGAAATAAAGTTCTCAGAGTTGGGACACCATGAGGGCTAACAGGCCTGCCTTTGATGTCTGACTTTGCAGGTGGGATGCAGGCACTGGGGCTTCATCTGACAGACCCAAGTCAGCGACTT ..............................................................................................................................................(((((((((.(((((.((...(((((....))))).....)).)))))))))))).)).................................................. ..........................................................................................................................................139..........................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR014237(GSM319961) 10 dpp MILI-KO total. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
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| ........................................................................................................................................................................................................GTGGGATGCAGGCACTGG................................ | 18 | 1 | 8.00 | 8.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TTTGATGTCTGACTTTGCAG.................................................. | 20 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TCAGAGTTGGGACACCATGAGG..................................................................................... | 22 | 1 | 3.00 | 3.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGt................................................. | 21 | t | 3.00 | 4.00 | - | - | - | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................TCTGACAGACCCAAGTCAGCGA... | 22 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................ACTGGGGCTTCATCTGACAGACC.............. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGttt............................................... | 23 | ttt | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................................................................TCTCAGAGTTGGGACACCATGAGGGCTAAC............................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................CTGCCTTTGATGTCTGACTTTGCAG.................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................................................................................................TGCAGGCACTGGGGCTTCATCTGACAGACC.............. | 30 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................GGGGCTTCATCTGACAGAaag............. | 21 | aag | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................GCAGGCACTGGGGCTTCATCTGA.................... | 23 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................GGCTTCATCTGACAGACC.............. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................GGGGCTTCATCTGACAGACCCA............ | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................GTGTGACATTCTAAAAAACTGAAGGAAA................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................................................................................................................................GCCTTTGATGTCTGACTTTG..................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................TTTGATGTCTGACTTTGCAtt................................................. | 21 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .............................................................................................................................................TCTCAGAGTTGGGACACCATGt....................................................................................... | 22 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................CAGGCACTGGGGCTTCATCTGACAG................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................AGGCACTGGGGCTTCATCTGAC................... | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TTCTCAGAGTTGGGACACCATGAGGGCTA................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................................................................................................GCTTCATCTGACAGA................ | 15 | 3 | 0.67 | 0.67 | - | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................GATGTCTGACTTTGCAG.................................................. | 17 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................TGATGTCTGACTTTGCAG.................................................. | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ......................................................................................................................................................................................TGATGTCTGACTTTG..................................................... | 15 | 15 | 0.07 | 0.07 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.07 |
| AAGGAGTTGGTAGGAATGTTACAGATGGTGAAACTGTCCATAAACAATAGAAGGGTATAGCAGCCATTTGACATGAGTTATCACTGGCAAGGTAGATTAGAAAAGCTGTGTGACATTCTAAAAAACTGAAGGAAATAAAGTTCTCAGAGTTGGGACACCATGAGGGCTAACAGGCCTGCCTTTGATGTCTGACTTTGCAGGTGGGATGCAGGCACTGGGGCTTCATCTGACAGACCCAAGTCAGCGACTT ..............................................................................................................................................(((((((((.(((((.((...(((((....))))).....)).)))))))))))).)).................................................. ..........................................................................................................................................139..........................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR014237(GSM319961) 10 dpp MILI-KO total. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
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