| Gene: Slc25a38 | ID: uc009scc.1_intron_2_0_chr9_120026656_f.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(2) PIWI.ip |
(14) TESTES |
| CACAGCTGTAACTGCCTTAATGCACTCTTTACTGACTGCTGCCTGTCCTGCCTCTGCCTCTCTCTCTCACTGGCGCTCCCTTCACCCGTAAACATCTTGCTTGTGGATCACCTGGGATCTCTAGAGACCCCTCTCCAGAGAGTGCACTCTTTTGCAGTTTCGAGTCTTTGATCCCCCTCTTCCCTCTGCCTCCCCTGCAGTCCATTGTGAGATGTGTCCCTGGAGTGGGGATCTACTTTGGCACCCTGTA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT4() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................ATCTTGCTTGTGGATCACCTGGGATCTCTAGAGACCCCTCTCCAGAGAGTGC......................................................................................................... | 52 | 1 | 21.00 | 21.00 | 21.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................TCGAGTCTTTGAacg............................................................................ | 15 | acg | 16.00 | 0.00 | - | 12.00 | - | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................................................................................TCGAGTCTTTGAacgc........................................................................... | 16 | acgc | 4.00 | 0.00 | - | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TGTGTCCCTGGAGTGGGGATC................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................TCCCTGGAGTGGGGATCTACTTTGGC........ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................................................................................................................................TGAGATGTGTCCCTGGAGTGGGGATCT................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................................................................................................................................................................................TTGTGAGATGTGTCCCTGGAGTGGG..................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .............................................................................................................................................................................................................TGTGAGATGTGTCCCTGGAGTGGGGATC................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| CACAGCTGTAACTGCCTTAATGCACTCTTTACTGACTGCTGCCTGTCCTGCCTCTGCCTCTCTCTCTCACTGGCGCTCCCTTCACCCGTAAACATCTTGCTTGTGGATCACCTGGGATCTCTAGAGACCCCTCTCCAGAGAGTGCACTCTTTTGCAGTTTCGAGTCTTTGATCCCCCTCTTCCCTCTGCCTCCCCTGCAGTCCATTGTGAGATGTGTCCCTGGAGTGGGGATCTACTTTGGCACCCTGTA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT4() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................CCTCTGCCTCCCCTGCAGTCCATTGTGA........................................ | 28 | 1 | 6.00 | 6.00 | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................TGCCTCCCCTGCAGTCCATTGTGAGA...................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................GCAGTCCATTGTGAGATGTGTCCCTGGA.......................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................GACCCCTCTCCAGAattt............................................................................................................... | 18 | attt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................GCACTCTTTACTGACTGCTGCCTGTCC.......................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................CCCTCTTCCCTCTGCCTattg........................................................... | 21 | attg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |