| Gene: Mlh1 | ID: uc009rvp.1_intron_2_0_chr9_111132840_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(18) TESTES |
| GGGCTTCCTGTCCTGACATTTGCAAGCAGATCCAGAAGAAAGAGTTCTCAACCACAGGCTCTTTTTAAACGCTGTCAGCTCACGGGGTCCATCCTGCAACCTGCACGCCAAGGCTTGGAGAAGCACCAGAGACATGAAACCTATCAGCCATAGTGCCATTCTTTCTTACCCACCTTTCTTGGCCTTCTCCCCACAAGCAGGAAGGGAACCTGATTGGATTACCTCTTCTGATTGACAGCTATGTGCCACC ...........................................((.(((.......(((.........((.((((......)))).))......(((.....))).)))...((((....))))....)))))..................................................................................................................... ........................................41......................................................................................................145....................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................TGGATTACCTCTTCTGATTGACAGCTA......... | 27 | 1 | 15.00 | 15.00 | 1.00 | 11.00 | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............TGACATTTGCAAGCAGATCCAGAAGAA.................................................................................................................................................................................................................. | 27 | 1 | 8.00 | 8.00 | 2.00 | 1.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 |
| .............................................TCTCAACCACAGGCTCTTTTTAAACGCT................................................................................................................................................................................. | 28 | 1 | 8.00 | 8.00 | 2.00 | - | - | - | 1.00 | 2.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TCTTCTGATTGACAGCTATGTGCCACC | 27 | 1 | 7.00 | 7.00 | 3.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TCTTTTTAAACGCTGTCAGCTCACGGG.................................................................................................................................................................... | 27 | 1 | 6.00 | 6.00 | 1.00 | 3.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............TGACATTTGCAAGCAGATCCAGAAGAAA................................................................................................................................................................................................................. | 28 | 1 | 6.00 | 6.00 | - | - | - | 2.00 | - | - | - | 3.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................TTGCAAGCAGATCCAGAAGAAAGAGTTCT.......................................................................................................................................................................................................... | 29 | 1 | 5.00 | 5.00 | 4.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................TCTCAACCACAGGCTCTTTTTAAACGC.................................................................................................................................................................................. | 27 | 1 | 4.00 | 4.00 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................TTGCAAGCAGATCCAGAAGAAAGAGTTC........................................................................................................................................................................................................... | 28 | 1 | 4.00 | 4.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TTAAACGCTGTCAGCTCACGGGGTCC................................................................................................................................................................ | 26 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | 3.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ......CCTGTCCTGACATTTGCAAGCAG............................................................................................................................................................................................................................. | 23 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - |
| .............TGACATTTGCAAGCAGATCCAGAAG.................................................................................................................................................................................................................... | 25 | 1 | 3.00 | 3.00 | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....TCCTGTCCTGACATTTGCAAGCAGATC.......................................................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................TTTTAAACGCTGTCAGCTCACGGG.................................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TTGGATTACCTCTTCTGATTGACAGC........... | 26 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................TTGGAGAAGCACCAGAGACATGAAACC............................................................................................................. | 27 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TCCTGCAACCTGCACGCCAAGGCTTGt.................................................................................................................................... | 27 | t | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - |
| .............TGACATTTGCAAGCAGATCCAGAAGA................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................CAAGGCTTGGAGAAGCACCAGAGAC..................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| ..................TTTGCAAGCAGATCCAGAAGAAAGAGT............................................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGGAGAAGCACCAGAGACATGAAACC............................................................................................................. | 26 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGGAGAAGCACCAGAGACATGAAACCTAT.......................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TTGGATTACCTCTTCTGATTGACAGCT.......... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...........................................................................................................................................................................................TCCCCACAAGCAGGAAGGGAACCTGATT................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........TCCTGACATTTGCAAGCAGATCCAGAAG.................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......CCTGTCCTGACATTTGCAAGCAGATC.......................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGGAGAAGCACCAGAGACATGAAA............................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGGAAGGGAACCTGATTGGATTACCTCT........................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TTGGCCTTCTCCCCACAAGCAGGAAGGGA........................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........GTCCTGACATTTGCAAGCAGATCCAGAAG.................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......CCTGTCCTGACATTTGCAAGCAGATCCA........................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............TGACATTTGCAAGCAGATCCAGAAGAAAG................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................TGCAAGCAGATCCAGAAGAAAGAGTT............................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................AAGCACCAGAGACATGAAACCTATCAGC...................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................TCCATCCTGCAACCTGCACGCCAAGGC........................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................TAAACGCTGTCAGCTCACGGGGTCCATC............................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................TCAACCACAGGCTCTTTTTAAACGCTG................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................TCTCCCCACAAGCAGGAAGGGAACCTGAT.................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................TTTTAAACGCTGTCAGCTCACGGGGT.................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................TTTTAAACGCTGTCAGCTCACGGGGTC................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................TTTGCAAGCAGATCCAGAAGAAAGAGTTC........................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................TTGCAAGCAGATCCAGAAGAAAGAGTT............................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................TCTCCCCACAAGCAGGAAGGGAACCTGA..................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TCCTGCAACCTGCACGCCAAGGCTTG..................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .................................................................TAAACGCTGTCAGCTCACGGGGTCCA............................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TGCACGCCAAGGCTTGGAGAAGCACCA.......................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................AGAAGCACCAGAGACATGAAACCTATCA........................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................CTCTTCTGATTGACAGCTATGTGCCACC | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............TGACATTTGCAAGCAGATCCAGAAGAAAGAG.............................................................................................................................................................................................................. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................................................................................................................TCAGCCATAGTGCCATTCTTTCTTACCC............................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................TTTTTAAACGCTGTCAGCTCACGGG.................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................TCCAGAAGAAAGAGTTCTCAACCACAGGC............................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................CCAAGGCTTGGAGAAGCACCAGAGAC..................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .................................................................TAAACGCTGTCAGCTCACGGGGTCC................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................CCTCTTCTGATTGACAGCTATGTGCCAC. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................ACCTCTTCTGATTGACAGCTATGTGCCAC. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TCCCCACAAGCAGGAAGGGAACCTGAT.................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGGAGAAGCACCAGAGACATGAAACCT............................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................CCCACAAGCAGGAAGGGAACCTGATTGGt................................ | 29 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................GCAAGCAGATCCAGAAGAAAGAGTTCTCAA....................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TTAAACGCTGTCAGCTCACGGGGTCCt............................................................................................................................................................... | 27 | t | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...................................................CCACAGGCTCTTTTTAAACGCTGTCAGC........................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................TAAACGCTGTCAGCTCACGGGGgcc................................................................................................................................................................ | 25 | gcc | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................GGATTACCTCTTCTGATTGACAGCTA......... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TACCTCTTCTGATTGACAGCTATGTGCCA.. | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................CAGAAGAAAGAGTTCTCA........................................................................................................................................................................................................ | 18 | 2 | 0.50 | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGGCTTCCTGTCCTGACATTTGCAAGCAGATCCAGAAGAAAGAGTTCTCAACCACAGGCTCTTTTTAAACGCTGTCAGCTCACGGGGTCCATCCTGCAACCTGCACGCCAAGGCTTGGAGAAGCACCAGAGACATGAAACCTATCAGCCATAGTGCCATTCTTTCTTACCCACCTTTCTTGGCCTTCTCCCCACAAGCAGGAAGGGAACCTGATTGGATTACCTCTTCTGATTGACAGCTATGTGCCACC ...........................................((.(((.......(((.........((.((((......)))).))......(((.....))).)))...((((....))))....)))))..................................................................................................................... ........................................41......................................................................................................145....................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................AAGAAAGAGTTCTCAACttt...................................................................................................................................................................................................... | 20 | ttt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |