| Gene: Cdc25a | ID: uc009rsx.1_intron_10_0_chr9_109791635_f.3p | SPECIES: mm9 |
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(7) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(24) TESTES |
| TGTTTAGTATTACCATAAAAAGCAGGATTTAAATGTGAGTGGGGATTAGCTTCTGACTTTATGAAGTGACATTTAGAAATGGCCTACAGAGAAAGCCTCACTGACATAACAGGCAGGTGGTCTACTGCGCTGCTGGGCCGTGGGACCTACAGACTCCTGGGTGTGGCTTAGCAGGTGCTCAGTGTCTGCTGTCTCCACAGGGTGCCGTGAATCTGCACATGGAAGAAGAGGTTGAAGACTTCTTACTTAA ...........................................................................................................................................(((((((...(((((..(((((((..((...))...))))))).)))))..))).)))).................................................... ......................................................................................................................................135..............................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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| ..................................................................................................................................................................................TCAGTGTCTGCTGTCTCCACAGa................................................. | 23 | a | 8.00 | 6.00 | 6.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TCAGTGTCTGCTGTCTCCACAG.................................................. | 22 | 1 | 6.00 | 6.00 | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................CGTGGGACCTACAGACTCCTGG.......................................................................................... | 22 | 1 | 5.00 | 5.00 | - | - | 4.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................TGAATCTGCACATGGAAGAAGAGGTT................. | 26 | 1 | 4.00 | 4.00 | - | - | - | 1.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ................................................................................................................................................................................................................GAATCTGCACATGGAAGAAGAGGTTG................ | 26 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................GTGAATCTGCACATGGAAGAAGAGGT.................. | 26 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................................TCAGTGTCTGCTGTCTCCACAGt................................................. | 23 | t | 2.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| ...............................................................................................................................................................................................................TGAATCTGCACATGGAAGAAGAGGTTt................ | 27 | t | 2.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................GTGAATCTGCACATGGAAGAAGAGGTT................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................CTGCACATGGAAGAAGAGGTT................. | 21 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................GCTCAGTGTCTGCTGTCTggc..................................................... | 21 | ggc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TGCACATGGAAGAAGAGGTTGAAGACTTCTTACT... | 34 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................ATCTGCACATGGAAGAAGAGGTTGAA.............. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................AGTGTCTGCTGTCTCCACAGtt................................................ | 22 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TCTGCACATGGAAGAAGAGGTTGAAGAC........... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................CATGGAAGAAGAGGTTGAAatt........... | 22 | att | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................GTGGGACCTACAGACTCCTGGGTGTG..................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TGCACATGGAAGAAGAGGTTGAAGACTT......... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................CCGTGGGACCTACAGACTCCTGGG......................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TCAGTGTCTGCTGTCTCCACAGta................................................ | 24 | ta | 1.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................CGTGGGACCTACAGACTCCTGGG......................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TGGGACCTACAGACTCCTGGGTat...................................................................................... | 24 | at | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..........................................................................................................................................CGTGGGACCTACAGACTCCTGGGTt....................................................................................... | 25 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................CCGTGGGACCTACAGACTCCTGG.......................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................................................................................................................................................ACATGGAAGAAGAGGTTGAAGA............ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TGGGACCTACAGACTCCTGGGTGTGGC................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................................................................TGGGACCTACAGACTCCTGGGTGTG..................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TCTGCACATGGAAGAAG...................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................GCGCTGCTGGGCCGTGGGA......................................................................................................... | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TGCTCAGTGTCTGCTGT.......................................................... | 17 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - | - | - | - | - | - |
| ...........ACCATAAAAAGCAGG................................................................................................................................................................................................................................ | 15 | 10 | 0.10 | 0.10 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.10 | - | - | - | - | - | - |
| TGTTTAGTATTACCATAAAAAGCAGGATTTAAATGTGAGTGGGGATTAGCTTCTGACTTTATGAAGTGACATTTAGAAATGGCCTACAGAGAAAGCCTCACTGACATAACAGGCAGGTGGTCTACTGCGCTGCTGGGCCGTGGGACCTACAGACTCCTGGGTGTGGCTTAGCAGGTGCTCAGTGTCTGCTGTCTCCACAGGGTGCCGTGAATCTGCACATGGAAGAAGAGGTTGAAGACTTCTTACTTAA ...........................................................................................................................................(((((((...(((((..(((((((..((...))...))))))).)))))..))).)))).................................................... ......................................................................................................................................135..............................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
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