| Gene: Plxnb1 | ID: uc009rrz.1_intron_10_0_chr9_109007923_f | SPECIES: mm9 |
|
|
(5) OTHER.mut |
(2) PIWI.mut |
(14) TESTES |
| TCCTGTCCAGCCTCGACTACCAGTACGACACCCCCGGGCTCTGGGAGCTGGTGAGGTCCAGCCCAGGAAGGAGGCCTCGGGAGGGGAGGGGAAGACACAGCCATTTGCTTACCCTGGGATTGATTCTCCTTTGGGAGGGTGAGAACCTAGTGTTGCCATGGAACCAAGCAAGGTAGAGGACTGAGGCGGTCAGGGTGGGAGCCACAGACTGCCTCACCCTTGGTGCCTGCAGGGAGAGGTGAATCAGAGGGTGAGCTCCTGCCCCTGTGTGGAGACCGTCCA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................................AAGGTAGAGGACTGAGGCGGTat.......................................................................................... | 23 | at | 3.00 | 1.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................AAGGTAGAGGACTGAGGCGGTC........................................................................................... | 22 | 1 | 3.00 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................ACCAAGCAAGGTAGAGGACTGAGGCG.............................................................................................. | 26 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................CCATGGAACCAAGCAAGGTAGAGGACTG................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................AGCAAGGTAGAGGACTGAGGCGGT............................................................................................ | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - |
| ................................................................................................................................................................................AGGACTGAGGCGGTCAGGGTGGGAGCCACAGA.......................................................................... | 32 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................AGCAAGGTAGAGGACTGAGGCGGTC........................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................CCATGGAACCAAGCAAGGTAGAGGACT.................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................................................................................GGAACCAAGCAAGGTAGAGGACTGA.................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................................................................................................................................CCAAGCAAGGTAGAGGACTGAGGCGG............................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................................................................................................................................GAGGACTGAGGCGGTCAGGGTGGGAGCCA.............................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................AAGGTAGAGGACTGAGGCGGT............................................................................................ | 21 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................AGCAAGGTAGAGGACTGAGG................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................ATTCTCCTTTGGGAacgt.............................................................................................................................................. | 18 | acgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................................................................................................................................................AAGGTAGAGGACTGAGGCGGTCt.......................................................................................... | 23 | t | 1.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................GACACCCCCGGGCTCTGGGAGCTGGTGAGGT................................................................................................................................................................................................................................. | 31 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................TAGTGTTGCCATGGAACCAAGCAAGGTAGAGGACTG................................................................................................... | 36 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................................................ACCAAGCAAGGTAGAGGACTGAGGC............................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................AGAGGACTGAGGCGGTCAGGGTGGGA.................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................CTTTGGGAGGGTGAGA.......................................................................................................................................... | 16 | 8 | 0.88 | 0.88 | 0.12 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.25 |
| .............................................................................................................................CTCCTTTGGGAGGGTG............................................................................................................................................. | 16 | 7 | 0.29 | 0.29 | - | - | - | - | - | - | - | - | - | - | - | - | 0.29 | - |
| ...............................................................................................................................CCTTTGGGAGGGTGAG........................................................................................................................................... | 16 | 9 | 0.22 | 0.22 | - | - | - | - | - | - | - | - | - | - | - | - | 0.22 | - |
| ...............................................................................................................................CCTTTGGGAGGGTGAGA.......................................................................................................................................... | 17 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - |
| TCCTGTCCAGCCTCGACTACCAGTACGACACCCCCGGGCTCTGGGAGCTGGTGAGGTCCAGCCCAGGAAGGAGGCCTCGGGAGGGGAGGGGAAGACACAGCCATTTGCTTACCCTGGGATTGATTCTCCTTTGGGAGGGTGAGAACCTAGTGTTGCCATGGAACCAAGCAAGGTAGAGGACTGAGGCGGTCAGGGTGGGAGCCACAGACTGCCTCACCCTTGGTGCCTGCAGGGAGAGGTGAATCAGAGGGTGAGCTCCTGCCCCTGTGTGGAGACCGTCCA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|