| Gene: Col7a1 | ID: uc009rrh.1_intron_61_0_chr9_108872032_f | SPECIES: mm9 |
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(1) OTHER.ip |
(2) OTHER.mut |
(1) PIWI.ip |
(5) TESTES |
| GAATCTCTTCTTAGGGTGCTTCAGGCAAAGCTGGGGACCCGGGGAGAGATGTAAGTCTGGGGAGATGTCAAGGTGGCGGGTGACTTGGGGGTCCAGGAGAGGCCTCATGGGTGTCATCACAATCAATGAGAACAGGGCAGATGGTTCTGCTGAGTCTTTGGGAGGAGATCTCTGTCCCTAATCAGCAGGTCACCGGACCCCTTGCTGGCAGCTGCTTTACACATCTTAACAGAATGGTCTTGGAGTTCTTCCTTTAGGAATCAAAGCTAGAGAGCCCTTGACTTACAGGATCTGGGCCTCAGAGGATTTCTACAAGACCTTTGAGTCTCTACACTGGGGACCTTCTAGGCTATAGGGTGCCATGTCCTAAGGGACAGCTCAAAGACCTTCTTAATCCTAACAATGATTTTCCCCCCAGGGACTTCCAGGCCTTCGAGGAGAACATGGCCCCCCTGGTCCCCCTGGCCC ....................................................................................................................................................((((.......(((((((....))).))))....(((((((((....))))...))))).)))).......................(((((((............((((((((....((.(((.((((..((((....)).)).)))))))))..)))))))))))))))..................................................................................................................................................... ..................................................................................................................................................147............................................................................................................................................................................322................................................................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) |
|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................................GAGTCTTTGGGAGGcttt........................................................................................................................................................................................................................................................................................................... | 18 | cttt | 1.00 | 0.00 | - | - | 1.00 | - | - |
| ...........................................................................................................................................................................................................................................................................................................CAGAGGATTTCTACAtttc...................................................................................................................................................... | 19 | tttc | 1.00 | 0.00 | - | 1.00 | - | - | - |
| ...................................GACCCGGGGAGAtag.................................................................................................................................................................................................................................................................................................................................................................................................................................. | 15 | tag | 1.00 | 0.00 | - | - | - | 1.00 | - |
| GAATCTCTTCTTAGGGTGCTTCAGGCAAAGCTGGGGACCCGGGGAGAGATGTAAGTCTGGGGAGATGTCAAGGTGGCGGGTGACTTGGGGGTCCAGGAGAGGCCTCATGGGTGTCATCACAATCAATGAGAACAGGGCAGATGGTTCTGCTGAGTCTTTGGGAGGAGATCTCTGTCCCTAATCAGCAGGTCACCGGACCCCTTGCTGGCAGCTGCTTTACACATCTTAACAGAATGGTCTTGGAGTTCTTCCTTTAGGAATCAAAGCTAGAGAGCCCTTGACTTACAGGATCTGGGCCTCAGAGGATTTCTACAAGACCTTTGAGTCTCTACACTGGGGACCTTCTAGGCTATAGGGTGCCATGTCCTAAGGGACAGCTCAAAGACCTTCTTAATCCTAACAATGATTTTCCCCCCAGGGACTTCCAGGCCTTCGAGGAGAACATGGCCCCCCTGGTCCCCCTGGCCC ....................................................................................................................................................((((.......(((((((....))).))))....(((((((((....))))...))))).)))).......................(((((((............((((((((....((.(((.((((..((((....)).)).)))))))))..)))))))))))))))..................................................................................................................................................... ..................................................................................................................................................147............................................................................................................................................................................322................................................................................................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) |
|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................................................................................................................................................................................................TCCTAACAATGATTgaac............................................................ | 18 | gaac | 1.00 | 0.00 | 1.00 | - | - | - | - |
| .........................................................................................................................................................TTGGGAGGAGATCTCgggc........................................................................................................................................................................................................................................................................................................ | 19 | gggc | 1.00 | 0.00 | 1.00 | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................TTCTTAATCCTAACAtgt.................................................................. | 18 | tgt | 1.00 | 0.00 | - | - | - | - | 1.00 |